Acropora digitifera (stony coral): 107341282
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Entry
107341282 CDS
T04352
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein-like
Organism
adf
Acropora digitifera (stony coral)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
Laminin_G_1
Laminin_G_2
V-set
Ig_5
Laminin_B
C2-set_2
Laminin_EGF
Ig_6
V-set_CD47
EGF
Ig_C17orf99
Laminin_G_3
Sp38
hEGF
Motif
Other DBs
NCBI-GeneID:
107341282
NCBI-ProteinID:
XP_015762170
LinkDB
All DBs
Position
Un
AA seq
2171 aa
AA seq
DB search
MNSHFLAIMLVILSMAVDSQKKHVEGRTCNKCKRSFFNLHSDEPDGCVACFCFGVSKECK
CADYYRNIVQLRFAVLEGADFLRLSDLSRGKIISTGFRVEGDPQYFVFENYDKIPAGTYY
WFLGKEFRGDMITSYDGIMRYRVSHEMDPDGALIVGTDVQITGRNMVLRFRHGRLLEGGE
NALYGLKLSEDWLRFPDGSRVTREQVLTVLSAVESILVRATYSNTTKRSILYDVTLEKGV
SHYSTFGKAKNIELCACPPGYLGTSCQHCARGYTRSSPGPEFTPCVPCNCHQHSKDCNPQ
NGRCMRCGHNTTGSTCEQCIVGFYGDPMKGTPEDCQVCPCPLTISTNQFSRICKLESDGK
PTCTACQTGYTGRNCERCANGYIGNPSNPGEKCVKIPVGFLPSVKVRPMKRVKEEGDNAL
FYCFARGPQTLRFSWSRENGQPMSRRVSMAGKRLIIRGVKKEDEGTYLCTARNIYGSKIS
SAKLTVKDRLEDPIAVSVSPKVLHVPLNHSALFICKVKSATDFELKWTRGMHGPLPNGAV
NVDGFLSIRSTQSIHSGSYTCTAKNSFSDDMASVQLRVGVTSPQVYTSPLRLSVREGDTA
QFRCSASGFPAPVLQWHGGPGGRLPPEAILSNGNGLLTFPVVKEIYEGQYFCTASNMGGI
SSTSVFLDVSAAGSAPVISVSPSSLTITEGEEAMFECKAAGNTPPTLRWSRANGQILESS
WAVSGVLRILSTTPEDEGVYACTAANSFGAKAFLVTLDVKIDTSTAPTAFVKPANQTVYA
GDSTMLLCQVTGDPYPAIQWSKVGSTLTDNHVIEGTLLRIRKVTKEDEGMYVCVSQNKKG
VKQAAGIVTVRKKVLPKIVIMPARTQTVAGGETATFRCVVKEGNPPPAVVWKREKSETLN
STNDGLLVIPYATGESQGKYICEAKNALGSTKAVALLVVQGQPKVILSPSSPVVVTSGSP
VTLECATAGDPTPIVKWHGPRQSQSNLKVIESVRGVLKLVIEETRKNDQGNYTCQAQNLV
GVTRESVQLIVLVPNEPPEIFVEPLFQTVIEGEKVVFRCNASGIPSPSIAWQKMGSYLRN
DTLYQNGLLTIDSASSSDAGSYFCKAVNSEGEDNLYVQLEVTVPPKVNVTPSEISVREGD
AFSINCVVKPSLPVTWSKINGSIFVSKNNGTGTLFIKKAELRHAGKYRCSASNDAGSSEG
FVQVIVYVVPIVAAWPESVIGIPNSNVTFQCNASGIPKPVISWRREDGDIPMRHSIVHGV
LKMTSLVGEDDGSYICTASNTAGASAIAVRLTVEASPSVTIKGGKTFHTVSVAGNLTLDC
IGTGIPQPKVQWSRVVSPMSQPLTSNGGLLVIRNAQHFHAGTYKCEVSNRAGSVHAQIVI
LVQEAPKVTIIPQKSRIKIGESAKFTCITSGFPVPQLTWSKLNDSLPTSSTVHGRVMKIT
NATEKDAGIYVCSALNDEGSTNGRALLEMKVPVPRFTQKPLSYLTLPQLTGEPLNFTIEM
VLIPEIADGLILYNDQRSNGSVGDFISFGMSDGFAEFRFNLGFEPAIIRSQQPLPLYEWH
EIVLERYQREGKLTIDGKPYTTGVSKGKSTGLNLNQDLYVGGVPDFSAISTLSGFKSGFI
GCLSYLVIDGKKANLGTPLSRLGLEDCEVCQTRPCKNGGTCTEVARDWTFVCNCRYGYSG
KTCHYSGQRCSPGVCNGGRCENVGNDSFRCVCPAGFFGERCEQGIPIDTPMFEGNSFMSF
PGIEGAARQLKFSMKFMVLKWRQNMLLLYNGQKTYPYRGDFISLAINDGHVEFRFDMGSG
PGLLRSAKTFSLGIWHTVIIRRQLDEAIMKFDDEPAVKGYSPCCLVGLNLGLDLFIGGVD
NFAAVDINKIGVSTGFFGCISRVSVDGREINLLRSNLNQRGIKQCKECLLPCEIKPCLNN
ATCIPVGKTGFLCSCAPGYTGEKCEAKIFGKRNNRTCLNGGVQSSASNRTCNCPIGYDGR
QCETSLSIGDSVSFSGDGFLEFPAFAMQGSRVATPDYVSFEIKTEAPDGIILWQGRRRDH
FAVGLRKRFLEFRFELGSGPAVLLSEVPLNDSQWHFVEVYRSFRAGSLKVDKYKNVTGTS
AKGSKGLNIDDDSHIFIGGGLNVVDMTHGKFNTGFTGCIRNVQFKMTRINLQREAINGRN
VLQCGAEMSKK
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgaattcacattttcttgcgattatgttagtgattctctcaatggcagtggattcacag
aagaaacacgtggaaggtcggacttgtaacaagtgtaagcggtcattcttcaacctccat
tcagatgagccagatggttgtgtagcgtgtttctgttttggtgtctccaaggaatgcaaa
tgcgctgactattataggaatatagttcagctgcgttttgctgtgttggaaggtgctgat
ttcctacgcctctctgatttgtcacgtggcaagattataagcaccggttttcgtgttgag
ggtgatccacagtattttgtgtttgaaaactatgacaaaattcctgctggaacatattat
tggttcctgggtaaagagttccgaggagacatgattacgagttatgatggtatcatgcgc
tatagagtgtctcatgagatggacccagatggggcactgattgtagggaccgatgtccaa
attacaggaagaaacatggttctcaggttccgccacggaagacttctcgagggaggagaa
aacgcattgtacggccttaaattatccgaggactggttaaggttcccggatggtagtcgc
gtcacaagagaacaagtcctgacggtgttatctgctgtggagagcatcttagtaagagca
acttacagcaacacaacgaaacgatccatcctttatgacgttactttggaaaagggagta
tcgcattactcaacatttggaaaagccaagaacattgaactttgcgcatgtccaccagga
taccttggaacgtcctgtcagcactgtgcaagagggtatactcgttcgtccccagggcct
gaattcactccttgtgtgccttgcaactgtcatcagcactctaaagattgtaatccacaa
aatggacgatgtatgaggtgcggtcataataccacaggctcaacatgtgagcaatgtatc
gtgggattctatggtgacccgatgaaaggaacacccgaagactgccaagtttgtccatgc
cctctaaccatctctacaaatcagtttagccggatttgcaagcttgagtcagatggaaag
ccaacgtgtaccgcttgtcaaactggttataccggaagaaactgtgaaaggtgtgcaaat
ggatacattggaaatcccagtaatccgggcgaaaagtgcgtcaaaataccagtgggtttt
ctgcctagtgttaaagttaggccaatgaagcgtgttaaggaagaaggagataatgcactt
ttctactgcttcgctcgcggtccacaaacgttgaggttctcatggtcaagggagaacgga
cagccaatgtctcgccgcgtttcaatggcgggaaagagactgatcatacggggagtaaag
aaggaagacgagggaacatacttatgcaccgcaagaaatatctacggctcaaaaatctcc
tcagcgaagttaactgtaaaagatcgcctcgaggatccgattgctgtatcggtatcccca
aaagttcttcacgttcctcttaaccacagcgccctgtttatatgcaaggtgaagagtgcc
actgatttcgaactcaaatggacacgtggtatgcatgggccccttcccaatggtgctgta
aacgtggacggtttcctaagcatccgcagcacacagagtatccacagtgggtcctacacc
tgcactgctaaaaactccttcagtgatgatatggccagtgtgcagcttagagttggagtg
actagtccacaggtctacacatctccccttcgtcttagtgtgcgcgagggagacacggct
caatttcgctgctcagcatctggttttccggccccagttcttcagtggcatggtggtccc
ggtggtcgacttcctcctgaagcaattttatcaaacggtaacggattgttgacatttccc
gtagtgaaggagatctacgaaggacaatatttttgcactgcttctaacatgggtggcata
tcgagcactagcgtcttcttagacgtgtcagctgctggaagtgccccagttatttctgtg
tctcccagctcacttaccatcacagaaggcgaagaggccatgtttgagtgcaaagctgct
ggaaacacccctccgactttacgctggtcacgtgcgaatggccagattctcgaatcttct
tgggccgtcagtggcgtattacgcattttatcaaccacgcctgaagacgaaggtgtttac
gcttgcacagctgctaattcatttggagctaaggcgtttctggtcactcttgatgtgaaa
atagatacatcgacagctcctacagcattcgtcaagccagcgaatcaaacagtttacgca
ggagattccacgatgctgttatgtcaggttacaggagatccctaccctgctattcaatgg
agcaaagttggaagcacactaacagacaatcatgttattgagggaacattactgcgtata
agaaaagtaactaaagaagacgagggaatgtatgtgtgtgtgtcgcagaacaagaaggga
gttaagcaagccgcggggatagttactgtcagaaagaaagttttgcctaaaatagtcatt
atgccagcaaggacacaaactgttgctggaggagagacggctactttcagatgtgtggta
aaagaaggcaatccaccaccggcagtggtctggaaacgagaaaaaagtgaaacactaaac
agcaccaacgatggtttgttggtgatcccttatgccacgggtgaaagtcaaggcaaatat
atatgtgaagcaaagaatgcactcggatcaacgaaagctgttgctttgcttgttgttcaa
ggtcagccaaaagttattttaagcccgtccagtcctgttgtagtaacatcagggagtccc
gttacgttggaatgcgcaacggcaggagatcctactccaattgtcaaatggcatggtcca
aggcaatctcagtcaaatctaaaagtaattgaaagtgtccgtggagtgctgaagctggtt
attgaggaaacgagaaagaatgatcagggtaactacacgtgtcaagcccagaaccttgta
ggcgtgacaagggaaagtgtacaactaattgttttggtaccgaacgagccgccagaaatc
tttgtagaaccactttttcaaacagtaatcgaaggggaaaaggttgtgtttcgctgcaat
gcctctggtataccatcgccgagcatagcatggcagaaaatgggttcttatcttagaaat
gacacactttatcaaaacggactgctgaccatcgattcggcgagctcaagcgatgcagga
agctatttctgtaaagcagtgaacagtgaaggggaagacaacctttacgttcaacttgag
gttacggtgccacccaaggttaacgttactccatctgagatctctgttagagaaggagat
gcatttagcattaactgtgtggttaagccatcacttcctgtcacctggtcaaagattaat
ggtagcatctttgtttcaaagaacaatggaacaggaacattgttcatcaaaaaggcagaa
ttgcgacatgccgggaaatatcgctgcagtgctagcaatgatgcaggctccagcgaaggt
ttcgttcaagtcatagtttatgttgtacccatagtagcggcgtggcctgagtctgtaatt
ggcataccaaactcaaatgttactttccagtgtaacgcaagcggtatacctaagcctgtg
atatcgtggagaagggaggatggagatattcccatgaggcattctattgtgcatggtgtg
ctgaagatgacgagtcttgttggcgaggatgatggaagttacatatgtactgcttccaat
acagctggtgcgtctgcgattgctgtaaggctcacagttgaagcttctcctagtgtaact
attaaaggtggaaaaacattccataccgtctctgttgctggtaatctgaccctcgattgc
attgggacgggtatccctcaacccaaggtacaatggtcccgagttgttagtccaatgtct
caaccattaacttcgaacggtggactcctggtcattcggaacgcccagcatttccatgca
ggaacgtacaagtgcgaagtttccaacagagctggctctgtacatgctcagatcgtcatc
ttagttcaagaggctcctaaagttacaatcattccacaaaaatctcggataaaaattgga
gagtcagcgaaatttacttgtatcacaagcggcttcccagtaccacaactaacatggtcg
aaactaaatgactcgcttcccacaagcagtaccgtgcatggacgagtgatgaagataacg
aatgcaactgaaaaggatgctgggatatatgtatgcagtgcattgaatgacgagggatcg
acaaacggaagagcattgttggaaatgaaagtgcctgtaccacgcttcacacaaaaaccg
ctgtcctacttgaccctaccacaactaactggggagcctctaaatttcaccattgaaatg
gtgctcataccagaaatcgcagacgggcttatactgtacaatgaccagagaagcaacggt
tctgttggcgactttatatcgttcggaatgtccgacggatttgctgaatttagattcaac
cttggctttgaacctgcaatcattcgaagccagcaacctttgccactgtacgaatggcac
gaaattgttttagaacgttaccaaagagaaggaaagctcaccattgatggcaaaccctat
accacaggagtttctaaagggaaaagtacggggctgaatctaaaccaggatctgtatgtg
ggtggagtgcctgacttctctgcaattagtacgctgtcagggttcaagtcaggatttatt
ggctgtttgagttatttagttattgatggcaaaaaggcaaatttaggaactccactgagt
cgcttggggctagaagattgtgaagtttgccaaacaagaccctgcaagaacggtggcaca
tgcacagaggttgctagagactggacttttgtctgtaattgcagatatggttattcagga
aagacatgtcactattctggtcagcgttgttcccctggagtgtgcaatggaggacgttgt
gagaatgttggaaatgatagcttcagatgtgtttgtcctgcaggtttctttggggagagg
tgtgagcaaggcattccaatagatacacctatgttcgaagggaattcgtttatgtccttt
ccaggaatagaaggagctgctcgtcagctgaagttttctatgaagtttatggtccttaaa
tggagacaaaacatgcttttgctttacaatggccagaaaacatacccttatcgcggggat
ttcatctcacttgccatcaacgatgggcacgtggaatttcgattcgacatgggaagtggt
cctggactcctgcgcagcgctaaaaccttctcattgggaatttggcacacagtcataata
cgcaggcaactggatgaggcaatcatgaaatttgacgacgagcctgcagttaagggatac
tcaccgtgttgtttagtgggactgaatctaggattagacctgttcataggaggtgtggat
aactttgctgccgttgacatcaataaaattggcgttagcacaggcttcttcggctgcatt
tcaagggtatctgtagatggaagagaaataaatttgctgcggtcaaaccttaaccagcgt
ggaatcaagcaatgtaaagagtgcttactgccttgtgagataaaaccgtgtctcaacaat
gcaacgtgtattcccgtgggcaaaactgggtttttatgttcatgtgcacccggatatacc
ggagaaaagtgcgaggctaaaatttttgggaaaagaaataataggacttgtcttaatggt
ggagtacagtcgtcggcctctaacaggacatgtaactgtcctatcggatatgacggcagg
cagtgtgagacttcccttagtattggtgacagtgtttcattcagtggtgatggtttttta
gagttcccagcgtttgctatgcaaggatcaagagtagcaacaccagactatgtgtcattt
gaaataaaaacagaagctccggatggaataattctatggcaaggaaggagacgagatcac
tttgcagtcggattaaggaaaagattcttagagttcagatttgagttgggatcaggtcca
gctgttcttctatctgaggtaccactcaatgatagccagtggcattttgtcgaggtctac
agaagttttcgagctggttctctgaaagtggacaagtacaaaaatgtaactggcacttca
gctaaagggagtaaaggactgaatatcgatgacgattcacatatttttataggtggaggt
ctcaatgtggttgatatgactcatggtaaattcaacactggttttactggatgtatcaga
aatgtccaattcaagatgaccagaattaatcttcaacgggaagcgataaatggaagaaat
gttctgcaatgtggtgctgaaatgtcaaagaaatga
DBGET
integrated database retrieval system
