Acropora digitifera (stony coral): 107341840
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Entry
107341840 CDS
T04352
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107341840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107341840
03036 Chromosome and associated proteins [BR:
adf03036
]
107341840
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107341840
Coactivators
SAGA/TFTC/STAGA complex
107341840
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
107341840
STAGA complex
107341840
TFTC complex
107341840
SAGA complex
107341840
SLIK complex
107341840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
TFIID_NTD2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_WDR11_2nd
Glyco_transf_88
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
107341840
NCBI-ProteinID:
XP_015762802
LinkDB
All DBs
Position
Un
AA seq
685 aa
AA seq
DB search
MAANAGATSKSNPSKKEKETLLAVLQFLKKNKLPETEKILRQEANCLDSLEELNLQTTPD
SEPDISSVLSAYNSDADPTRYEDYFSSLQAFVEKSLDVYKPELAMVLYPMFVHMYLELVY
KGSEKEAQSFFSCFRGSQEDYHEEDLCKLAAITRREHMKSNEFMGTLRSNKFVIRMSKDT
YQVLKKHLQDQQQELLLSLIQQHLHFDVFEGRPRNKQTIEATAGAVTGEATFEANKSKVY
YGIPPEPDLGVVIEDESEDDEDKDKPKVKTMTKQYWSGQNIIVFEGRPRNKQTIEATAGA
VTGEATFEANKSKVYYGIPPEPDLGVVIEDESEDDEDKDKPKKKKVKKDSNGPGKKKQEH
NPNAPPLNRQLPFPVMKDSDKLVKITLIREAGKRVRLGPDLLPSICFYSILNAHTSLNTV
SISEDSSLLSGGFEDSCVRVWSLTPKKLRMLKPPSELAQIDKEAEDVLERIMDHRTAVES
RRLIGHSGPVFSTSFNTDNSFLLSSSADRTGAVSATCRVAFHPNCNYVATGSCDRTVRLW
DLNTGSSVRFFTGHKGAIYSLSFSPDGRYLASSGVDKRILVWDLAEGTLLTELKGHSDTV
YSLRFSRDGNMLASGGVDNCVKLWDARAICNPDDDDLERDNENPASSKGVTYELGSYPTK
RTPVHSLHFTLRNLLLASGPFTPAS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgcgggtgcaacttctaagtcgaatccatcgaaaaaagaaaaagaaacc
ctgcttgctgtgctccagtttttaaagaagaataagttgcctgaaactgagaagatcctc
aggcaagaggccaactgtctcgattctttggaagaattaaatcttcagactactccggat
tccgagccagatatttcttcagttttatctgcttacaacagtgatgctgatccaactaga
tatgaggattactttagtagtttgcaagcttttgttgagaaatcccttgatgtatataag
cctgaattagctatggtcctgtatccaatgtttgttcacatgtatcttgagcttgtgtat
aaaggcagtgaaaaagaagcccagtctttcttttcttgttttcgtggaagtcaagaggat
taccatgaggaagatctatgtaaattggcagccatcactcgacgagaacacatgaaaagc
aatgaattcatgggaacattacggagtaacaagtttgtgatcaggatgtcaaaagatacc
tatcaagtactaaagaaacatttacaggaccaacagcaggagctacttctttcactaata
cagcaacatctccattttgatgtttttgaaggaagaccacgcaacaagcaaacaatagaa
gccacagctggggcagtcacaggggaggctacatttgaagctaacaagagcaaggtttat
tatgggattcctccagaaccagatcttggagtagtaatagaagatgaaagtgaggatgac
gaagataaagataagccaaaggtgaaaactatgactaaacaatattggtctggacagaac
atcattgtttttgaaggaagaccacgcaacaagcaaacaatagaagccacagctggggca
gtcacaggggaggctacatttgaagctaacaagagcaaggtttattatgggattcctcca
gaaccagatcttggagtagtaatagaagatgaaagtgaggatgacgaagataaagataag
ccaaagaaaaagaaagtcaagaaagattcaaatggaccaggcaaaaagaaacaggaacac
aacccaaacgctccaccactgaaccgccagttaccatttccagtcatgaaagacagtgac
aaattggtcaagataacgttgataagagaagctggaaaaagagtaagattaggtccagac
ctgctcccttccatttgcttctacagcatacttaatgcacatacaagtttgaacactgtc
agtatatcagaggactcaagtctattgtctggtgggtttgaagacagttgtgtacgagtg
tggagcctcactcccaagaaactccgtatgttaaaaccaccctcagaactcgcccaaatt
gacaaggaagcagaggatgttcttgaacgaataatggaccacaggactgccgtggaaagc
agacgtttaattggtcattcaggacctgtgttttctacaagtttcaacacagataactcc
ttccttctctcaagctctgccgatagaacaggtgcagtatcagcaacttgcagagtcgct
tttcatccaaactgcaactacgtagctaccggatcttgcgatcggaccgtgaggctctgg
gatctaaatactggcagctcggtccggtttttcaccggtcataagggagccatctattct
ctctcgttttctcccgacggacgttatctggcttcttcaggtgtcgacaagcgtatcctg
gtttgggacctggcagaagggacattattgacagagctgaaaggacattcagataccgtg
tactctctgcgttttagcagagatggaaacatgctcgcttcaggcggcgttgataactgt
gtgaagttatgggatgctcgcgccatttgcaatcctgacgatgacgatttagaaagagac
aacgaaaaccctgcctcgtccaaaggcgtaacttatgaacttggatcatatcctaccaag
aggacgccggtacacagcttgcacttcacgttacgaaacctgcttctggcgtccgggcct
ttcacaccggcttcttag
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integrated database retrieval system
