KEGG   Acropora digitifera (stony coral): 107342085
Entry
107342085         CDS       T04352                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107342085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:adf04121]
    107342085
Enzymes [BR:adf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107342085
Ubiquitin system [BR:adf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107342085
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107342085
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IFT122_1st WD40_like Beta-prop_SCAP Beta-prop_WDR35_TULP_N FemAB Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_IFT140_1st WDR54
Other DBs
NCBI-GeneID: 107342085
NCBI-ProteinID: XP_015763030
LinkDB
Position
Un
AA seq 434 aa
KAIVNYKLYLKISYSKLYFVLDVNYVLDVLTQKKQQLEADSQAVQHELLKDFLSQVKRHK
QEQLDQLTREVKLIDEDMKRVKEMIATHNRQYPLPVPLTLPGAERLLVNDVVMISDIIWF
ILHSAYLVPKDFRPFGQSQILLVPFSVCSIEFDRDFDYFAIAGVTKKIKVFEYGTVIRDV
VDIHCPVNEMVCNSKISSICWSSYHKGLLASSDYEGTVTLWDAFTGSKTRSFQEHEKRCW
SVDFNHVDPKLLASGSDDAKVKLWSTDMEHSVACLEAKANVCCVKFNPESRYHLSFGSAD
HCVHYYDLRNTTLPITVFKGHRKAVSYTKFINTEEIVSASTDSQLKLWNISKPHCLRTFK
GHINEKNFVGLASNGDYVACGKSTSQFKKLRWLFQRRRHFKIELCTLVAVCEVSFRLVGT
NDFHVKAENERLTD
NT seq 1305 nt   +upstreamnt  +downstreamnt
aaagctattgtaaattataaactatatttaaaaataagttattctaaattgtattttgtt
ttagatgtaaattatgtgctggatgtattgacacaaaagaagcaacagctggaagcagat
agtcaagctgtgcaacatgagcttctaaaagattttctgtcacaagtcaagcggcataag
caagagcaattggatcagttgacaagagaagtcaagctcattgacgaagacatgaaacga
gtaaaagaaatgatagcaacacataaccgacaatatccactgccagttcctttgactctg
ccaggggcagagcgtctcttggtcaatgatgtggtaatgataagtgacattatctggttc
attttacattcagcctatctcgtacctaaagacttcaggccttttggtcagtctcagatt
ttgttggttcccttttctgtttgcagtattgagtttgaccgcgattttgactactttgca
attgctggggttaccaagaaaatcaaggtatttgaatatggcaccgtgatcagagatgta
gtggatattcactgtcctgtcaatgaaatggtctgcaattcaaaaattagttccatctgt
tggagttcgtaccacaaaggtttactggccagtagtgactacgaaggcaccgttacactc
tgggacgcgtttacaggatcaaaaaccaggtcttttcaggaacacgagaaaaggtgttgg
agcgtggattttaatcacgtggatcccaaactactcgcctccggatctgatgacgcgaaa
gtcaagctgtggtcgacagacatggaacattccgtcgcctgtttggaagccaaagcaaat
gtttgttgcgtcaaatttaatccagagagtagatatcacttatcgtttggatcagcagat
cattgtgtccattattatgatttacggaacactacgctgccaataacagtttttaaaggt
cacaggaaggcagtgtcctacaccaaatttatcaacactgaagaaattgtatctgcatca
accgatagtcagttgaaattgtggaatataagtaagccgcactgtcttcgaactttcaaa
ggccacatcaacgaaaagaactttgtaggactagcttccaatggagattatgttgcctgt
ggtaagagcactagtcaatttaagaagctaaggtggctatttcaacgaagacgtcacttt
aaaatagaactttgcacgttggtcgctgtgtgcgaagtgtcctttcgcttggttggtact
aatgattttcatgtgaaggcagagaatgaaagacttactgactga

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