Acropora digitifera (stony coral): 107343144
Help
Entry
107343144 CDS
T04352
Name
(RefSeq) Bloom syndrome protein homolog
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03440
Homologous recombination
adf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107343144
03460 Fanconi anemia pathway
107343144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adf03032
]
107343144
03400 DNA repair and recombination proteins [BR:
adf03400
]
107343144
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107343144
DNA replication proteins [BR:
adf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107343144
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107343144
Bloom's syndrome complex (BTR)
107343144
FA (Fanconi anemia) pathway
107343144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
RQC
ResIII
VPA1267
Motif
Other DBs
NCBI-GeneID:
107343144
NCBI-ProteinID:
XP_015764194
LinkDB
All DBs
Position
Un
AA seq
1033 aa
AA seq
DB search
MGKEKTDNSPTEDIASHEPAASHEHELLSLESSPSQYFYSAPNSPATPEYFSPPPSPSTA
PFLLSAVPGKVTSTVPSCGNNKTPHALLEPLPIHTPTSTIIESLDQARSLYYEIMESICS
SLDNVEPAIINYLPRKLAEAQCLSFTNPSNLFLNRKRVRCQLEHLENMLKERGEIPNCYR
NVVKLTSCSKQPHTSAQNNARSAESVSKRHNSTLPRSQYQENKHISPLLEKNKRLSKGNN
RSEVIDSVNEVSVLSTNVGDCISKDSLMLTDLLDFSDEEWADNFESDTTQASPLATSVVS
SGGILKKAESSPFTQNRDDGFLLERKPISTTIQTNTVNSSITSPKNNYVPNNGNDNDLKQ
RDMPYHREMWKILKNVYGIRALRTNQLEAINAAMMKLDCFILMPTGGGKSLCFQLTGLMG
TGVTFVISPLRSLIQDQVQRLQSLKLPAVHLLGDTGPGSTKHLNAVYQDLSLRNPTVKLV
YVTPEKLSASDKLIAVMNSLYSRGRLERIVIDEAHCVSQWGHDFRPDYKKLSSLRSKFPE
VPFMALTATATPRVRKDVLHQLKMKEPKWFTQSFNRPNLRFIVKPKKKVMEEILHYVKTK
HPISSGIIYCLSRNDCERVAECLNEADVSAIAYHAGLSDNQRTKCQEAWIKGQYKVVCAT
IAFGMGIDKGTVRYVIHHSMPKSLEGYYQECGRAGRDGEPAECILFYLYGDTSRIRRMIQ
NSPERSADSKQVDMDNLYRVVQYCENVTECRRVQLLHYFGETDFDPSQCRSRPDTVCDTC
ASSGSFVYKDITSEAKAFVESVNSIVHGGSNNWRKPIRSYTLNHFIDIFKGSESSRVTSE
GHDETPLYGLGRTYHRNDAERLGHLLVLKHVLEEHMVFGNHDNVISYVKLGPKALDILHS
RVKLPQFAVREKSCGKSKGKVDENSTILGGTTDTGSLSEGCESESHYWQHDQNSGFMRKR
KRKSTGPTTRFGCTSSSSSASIGGPVQKVRKTVQKYPHNRLQQTGTKLCGLGNKIGQRES
LVLMAPPRPKRRL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaaaaaactgataattcaccaacagaggatattgcctcccatgaacctgct
gcctcccatgaacatgaattgctttcactggaaagctcaccctctcagtatttctactca
gcacccaatagtccagcaactccagagtatttttcacctccaccatcacccagcacagca
ccttttctactgagtgcagttcctggtaaagttacaagtacagttccatcttgtgggaac
aacaaaactcctcatgcattgctggaaccacttcccatacatactccaacatccacaatt
atagagagtttggatcaagcacgttccctctattatgaaataatggaaagcatttgttct
tccctcgataatgttgaaccagctattatcaactaccttccaaggaaacttgctgaagca
caatgtctaagcttcactaatccatcaaatctgtttttgaacaggaaaagagtacgatgt
cagcttgagcatcttgaaaacatgctaaaagagcgaggagaaataccaaattgttataga
aacgttgtaaagcttacaagttgcagtaaacagccccacacatctgcccaaaataatgcc
cgttccgcagaaagtgtttccaaaagacacaattcaactttgcctagaagtcagtatcaa
gaaaacaagcacatttcacctttattggaaaagaacaagagactttcaaaaggaaataat
cgttcagaggttattgattcagttaatgaagtttctgtattgtcaacaaatgtgggagat
tgcataagcaaggattctctgatgctgaccgatttactggacttcagtgatgaggaatgg
gcagacaattttgaaagtgacactacgcaagcttcaccattagccacaagcgttgtttct
tctggtggcattctcaagaaagcagagtcatcaccttttacccaaaacagagatgatggc
tttttacttgaacggaaacctatcagtactaccattcaaaccaatactgttaactcatcc
atcacttccccgaaaaataattatgtgcccaacaatggcaatgacaatgatttgaagcag
agggatatgccatatcacagagaaatgtggaaaatattgaaaaatgtttacggtatccgg
gctttgaggaccaatcagttggaagccataaatgctgccatgatgaagcttgactgtttc
attttaatgccaactggaggtggaaagagcctttgttttcagttgactggtttaatgggt
accggtgtcacatttgtcatttctcccttgagatctcttattcaagatcaagtacagagg
ctccagtcactaaagttgcctgctgtccacttacttggggatacaggtcctgggtcaaca
aaacatcttaatgctgtctatcaggacctctccctaagaaatccaacggtcaagcttgtg
tatgtaacgccagagaaactttcagccagtgataagcttattgctgttatgaacagcctt
tatagtcgtggacgtcttgaaaggattgtaattgacgaagcacattgcgttagccaatgg
ggccacgactttcgtccggactacaaaaagctgtcatcattaagaagcaagttccctgag
gttccttttatggctctcactgcaactgctacacctcgtgtgcgaaaagatgtgctacat
cagctgaagatgaaagaaccaaaatggtttacacaaagctttaatcgacctaatttacga
ttcattgtcaaaccgaagaagaaagttatggaagaaatccttcactatgtcaagacaaag
catccaatttcgtctggaataatttattgcttatccagaaacgattgtgagcgggttgca
gaatgcttaaatgaagctgatgttagtgcaattgcatatcatgctggcctatcagataac
caaagaacgaagtgtcaagaagcatggataaagggtcaatataaggtggtatgtgctacc
attgccttcggcatgggaattgataaaggtaccgtgaggtatgtgattcatcactcaatg
cccaaatcattggaggggtattaccaggagtgtggaagggcaggacgcgatggtgaacca
gctgaatgtattctgttttatttgtacggtgatacaagtagaataaggaggatgatccaa
aacagcccagaaagaagtgcagactccaagcaggtggacatggataacctttatcgcgtg
gtgcagtattgtgaaaatgtaacagaatgcaggagggtacaattgttgcattactttggt
gagacggactttgatccatcccagtgccgcagtaggcctgacacagtatgcgatacatgt
gctagttctggttcatttgtctacaaagacatcacatctgaggctaaggcctttgtggag
agtgtgaactctatcgttcatggtgggagtaacaactggagaaagcctatcaggagttat
acattgaatcattttattgacattttcaaggggtctgaaagctctcgagttacgtcagaa
ggccatgatgaaactcctttgtatggtttgggaagaacttaccacagaaatgatgcggaa
agacttggccatcttctagttttaaaacatgttctggaggaacatatggtttttggaaac
catgacaatgtcattagctatgttaaactgggacctaaagctttggatattcttcattcc
cgagtcaagcttccacagtttgcagtgagagaaaaaagctgcgggaagtcaaaaggcaag
gttgatgaaaactctacgatcttgggaggcacgacggacacaggtagcctcagcgagggg
tgcgaaagcgagtcgcattattggcagcacgaccaaaattcaggatttatgcgtaaaagg
aaaaggaagtcaacaggaccaacgacaaggttcggctgtacttcaagcagcagcagcgcg
agtattggtggtcctgtgcaaaaggtgagaaaaacagtgcagaagtaccctcacaatagg
ttgcaacaaacaggaacgaagctttgtggattaggaaacaaaatcggtcaaagagaaagt
ctcgttctcatggcaccaccacgtcctaaaagaagactttga
DBGET
integrated database retrieval system
