KEGG   Acropora digitifera (stony coral): 107343854
Entry
107343854         CDS       T04352                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107343854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107343854
   03036 Chromosome and associated proteins [BR:adf03036]
    107343854
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107343854
Chromosome and associated proteins [BR:adf03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     107343854
    COMPASS/SET1 complex (yeast)
     107343854
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st PAC11 Beta-prop_RIG_2nd CFAP251_N Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_HPS5 TRM82_WD Beta-prop_VPS8 WD40_RFWD3 MIOS_WD40 Beta-prop_NWD2_C Nbas_N
Other DBs
NCBI-GeneID: 107343854
NCBI-ProteinID: XP_015764930
LinkDB
Position
Un
AA seq 305 aa
ILGDKFRVNSACVSKPLISSSDDDSIVIYDCLEGKPKRTLYSKKYGVAQIQYTHATNTVI
HTSTKIDDTIRYLSLHDNKYLRYFTGHTKRVMTLHMSPMDDTFVSGSLDRTLRLWDLRSP
NCQGLMHVNGRPVAAFDPEGLIFAAGVDSEMVKLYDLRSFDKGPFSTFHIQNDPNIEWTG
VKFSSDGKMILLATNGGVIHLIDAFQGTQLHTFSGHTVARSTPVEVCFTPDAQYVISGSQ
DGRVHVWASDSGQKLTVLEGNHPGPIQCVTFNPKYMMLASACTNMAFWLPNTDELDDANK
RLLSS
NT seq 918 nt   +upstreamnt  +downstreamnt
atacttggcgataaatttcgtgttaactccgcttgcgtctccaaaccactcatatccagt
agcgatgatgattccattgtcatttatgactgcctcgagggaaaaccaaaaagaacactt
tacagcaagaaatatggtgttgctcaaatccagtacacacatgcgacaaacacagtaatt
cacacttcgacaaaaattgatgacaccattcgctacctgtcgcttcatgacaacaagtat
ctcagatattttacaggacatacaaaaagagttatgactcttcatatgtcaccaatggat
gatacctttgtatctggttcattggaccgtacattacgcttgtgggacttgagatctcca
aattgccagggtttgatgcatgttaatggtagaccagttgcagcctttgatcctgaaggc
cttatatttgcagctggtgtggactctgaaatggtcaagctttatgatttgaggtcattt
gataagggtcccttctccactttccacattcaaaatgacccgaacatagaatggacaggc
gtgaaattcagttcagatggaaaaatgattttactggccacaaatggaggagttattcat
ttaattgatgccttccaaggaacacaacttcatacattttcaggacacactgttgctagg
tccactccagttgaagtttgtttcactccagatgcacaatatgtcatctcaggctcgcaa
gatggccgcgtccatgtatgggcctcagatagtggccaaaaactcactgtgcttgagggc
aatcacccaggccccattcagtgtgtcaccttcaatccaaaatacatgatgctagccagt
gcttgcactaacatggcattttggctgcccaatacagatgagctggatgatgccaacaag
agattactatcaagttaa

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