Acropora digitifera (stony coral): 107344085
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Entry
107344085 CDS
T04352
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03030
DNA replication
adf03410
Base excision repair
adf03420
Nucleotide excision repair
adf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107344085
03410 Base excision repair
107344085
03420 Nucleotide excision repair
107344085
03430 Mismatch repair
107344085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adf03032
]
107344085
03400 DNA repair and recombination proteins [BR:
adf03400
]
107344085
DNA replication proteins [BR:
adf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107344085
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107344085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
RuvB_N
AAA_7
AAA_17
Rad17
BRCT_2
AAA_16
AAA_19
AAA_5
AAA_14
nSTAND3
AAA_18
AAA_33
Zeta_toxin
AAA_30
NTPase_1
NPHP3_N
SKI
RNA_helicase
BNIP3
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
107344085
NCBI-ProteinID:
XP_015765177
LinkDB
All DBs
Position
Un
AA seq
1094 aa
AA seq
DB search
MKKDPKDSVGGDVPNEVPPSLEKKKSNYRSYITRDGPRALGSKAIPEGEENCLEGLTFVI
TGVLESIERDDAVDLIQRYGGKVTGSVSKKTSYVVVGRDAGESKLNKARQCGTTQLDEEG
LFELVKTRPGKQISYESTAAEKKPRKKLKSDSSETKEEVPREKLVLEGNSSQLSQQSTSS
PATQTPSASPTLKGEASLMWVDKYRPRSIKQIIGQQGDKSNMRKLINWLRAWDENRKKPP
SKASFFKKDQDGSSLKAALLSGSPGVGKTTTATLVCEELGFTYIEMNASDTRSKKTLEEH
IAQSLSNKTMDGFLPAFSLLNDCYYCIALVLSANDLRSYEHCLSSSAGEGNLNWTRTLTS
ALLGQENCLEGLTFVITGVLESIERDDAVDLIQRYGGKVTGSVSKKTSYVVVGRDSGESK
LNKARQCGTTQLDEEGLFELVKTRPGKQISYESPAAEKKPRKKLKSDSSETKEEVPREKL
VLEGNSSQLSQQSTSSPATQTPSASPTLKGEASLMWVDKYRPRSIKQIIGQQGDKSNMRK
LMNWLRAWDENRKKPPSKASFFKKDQDGSSLKAALLSGSPGVGKTTTATLVCEELGFTYI
EMNASDTRSKKTLEEHIAQSLSNKTMDGFLPGMKADPMKHVLIMDEVDGMAGNEDRGGMQ
ELILLIKNSKIPIICMCNDRNSQKIRSLANYCFDLRFQRPRVEQIKVRSFSLSGGCLQPS
ILFNPHSTPLCYPKSLPPTLGTEQLGGTADTTKKRKAGSREKRKFSGNKQIGGEFVLSQN
GPITEQFPHDKALTLFEDHRRLTKGPIIGPFFYQPGGKKNKKLDFNILFFSGNIKKTLAL
ISQAADSICDGDLVGRLIREKGNWSLLPMQAMFSCVIPSGLICGGMGQRIEFPQWLGKNS
KHGRLDRLLQELQSHMRLSTSSSKRSMNLDYIPHLRKVLTSPLMTQEPAEINPGVSRVIQ
VMADYDLTREDWECVLEVGQFEGQKDPIASIQSKVKAAFTRAYNKENRKTPYVIRAAPKK
GRKGAAEQESQGFDEEGMEQLSGEMAGENDDDNIENDAMIKTTKRQAKASVSARKSTSQE
TGKGKGKGKGKNRK
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagatcccaaggactcggttggaggtgatgtgccaaatgaagtcccaccttca
ttagaaaagaaaaaatcaaattatcgcagttatataacgagggatgggccacgagctctg
ggatctaaagccattccagagggtgaggaaaactgtttagagggccttacgtttgttatc
accggagttttggaaagcatcgagagagacgatgctgttgatttgattcagagatatggg
ggaaaggttacaggatccgtcagtaaaaagacaagttatgttgtggttggtcgagacgct
ggtgaaagtaaactgaacaaggctcgtcagtgtggaacaactcagctggacgaagaaggc
ttgttcgagcttgttaaaacaagacctggaaagcaaatctcttacgagtctactgcggcg
gagaagaaaccacggaagaagctaaaaagtgacagttcggagacgaaagaggaagttcct
cgggaaaaattggtgttggaaggcaattcgtcacagctaagccagcaatcgacatcatct
cctgcgacacaaacaccttcagcatcacccaccttgaaaggagaggcaagcttgatgtgg
gtagacaaatatcgtccgcgctcgatcaaacagattattggccaacaaggcgataagagc
aacatgcgaaagctgataaactggctgagagcttgggacgagaacaggaagaaaccgcca
tctaaagcatcgttttttaagaaagaccaagatggctcgtctcttaaggcagcgctattg
tccgggtctccaggggttggaaaaacaacaacggccactctagtttgcgaagagcttggg
tttacctacatcgagatgaacgctagtgacacaaggagtaaaaagacattagaagaacac
atcgcccaatcgctgagcaacaagaccatggatggtttcctacctgcattctctctcctt
aatgattgttactattgtattgctttagttctcagtgcaaatgatcttcgcagttatgag
cactgcttgagcagtagcgctggagagggaaaccttaactggactcgaaccctgacatct
gcgttgctgggtcaggaaaactgtttagagggcctcacgtttgttatcaccggagttttg
gaaagcatcgagagagacgatgctgttgatttgattcagagatatgggggaaaggttaca
ggatccgtcagtaaaaagacaagttatgttgtggttggtcgagactctggtgaaagtaaa
ctgaacaaggctcgtcagtgtggaacaactcagctggacgaagaaggcttgttcgagctt
gttaaaacaagacctggaaagcaaatctcttacgagtctcctgcggcggagaagaaacca
cggaagaagctaaaaagtgacagttcggagacgaaagaggaagttcctcgggaaaaattg
gtgttggaaggcaattcgtcacagctaagccagcaatcgacatcatctcctgcgacacaa
acaccttcagcatcacccaccttgaaaggggaggcaagcttgatgtgggtggacaagtat
cgtccgcgctcgatcaaacagattattggccaacaaggcgataagagcaatatgcgaaag
ctgatgaactggctgagagcctgggacgagaacaggaagaaaccgccatctaaagcatcg
ttttttaagaaagaccaagatggctcgtctcttaaggcagcgctattgtccgggtctcct
ggagttggaaagacaacaacggccactctagtttgcgaagagcttgggtttacctacatc
gagatgaacgctagtgacacaaggagtaaaaagacattagaagaacacatcgcccagtcc
ctcagcaacaagaccatggatggtttcctacctggaatgaaggcggatccgatgaaacat
gttctcataatggacgaggtcgatggaatggctggtaatgaagatcgaggaggcatgcag
gaactcatcttgctcataaagaactccaagattccaatcatctgcatgtgtaatgacagg
aacagtcagaagattcgcagcttggcaaattactgctttgatttgaggtttcagaggccc
cgtgtggagcaaataaaggtaaggtccttcagcctctctggtggatgccttcagccctcg
attctgtttaaccctcactccacccccctttgctaccccaaatccctcccgccgactctt
ggaaccgaacagctaggaggtacggcagatacaacaaagaaacggaaggcagggtcaaga
gaaaagagaaaatttagtggaaataaacaaatcggtggtgaatttgtgctttcgcaaaat
gggccaataaccgaacaatttccacatgataaggcactcactttatttgaagatcaccgg
cggcttacaaagggtccgattattggcccctttttctatcaaccagggggaaagaaaaat
aaaaaacttgactttaatattttatttttcagtggcaatataaagaaaaccttggcgctt
atcagccaggcggcggactccatctgtgatggggatttagttggcaggctgataagagaa
aaaggaaattggtctttgcttccaatgcaggccatgttctcgtgcgtgatcccgtctggt
ttgatttgtggcggaatgggacagagaatcgaatttccacagtggcttgggaaaaattcc
aaacacggcagattagaccgcttactgcaagaactgcagagtcacatgcgcctgagcaca
tcttcaagcaagcgatccatgaatctggattacataccacatctgaggaaagttcttacc
tcaccgcttatgacgcaagaaccagctgaaatcaatcctggagtttccagggtcattcaa
gtgatggcggattatgacttaaccagagaagattgggagtgcgtacttgaagtcggtcaa
tttgaggggcaaaaagatcctattgcttctatccaatcgaaggtaaaagcagccttcacg
agggcctataacaaagagaaccgcaaaacgccctacgtgattcgtgcagcgccaaagaag
ggcagaaaaggggcggcagaacaagaaagccagggctttgatgaagaggggatggagcaa
ctgagcggggaaatggcgggggaaaatgatgatgacaacattgaaaacgacgccatgata
aaaactacaaagagacaagccaaagctagtgtaagcgcacgaaaaagtacaagccaggaa
acagggaaaggcaaggggaaaggaaaagggaaaaataggaaatga
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integrated database retrieval system
