Acropora digitifera (stony coral): 107345049
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Entry
107345049 CDS
T04352
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107345049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107345049
03019 Messenger RNA biogenesis [BR:
adf03019
]
107345049
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107345049
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107345049
U7-dependent histone pre-mRNA processing factors
107345049
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PHF20_AT-hook
SMC_ScpB
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
107345049
NCBI-ProteinID:
XP_015766217
LinkDB
All DBs
Position
Un
AA seq
1054 aa
AA seq
DB search
MAADTQGSVRLSVASQFFHNGDADTLAAPGEVATEDSTSEKVIDLLNQAQLEKDNKLNCL
KQVQEFILNKDPTLLDNFLDEILVFQQDRSADVRRFVVGFIEEACKKDIELLSKVQNTLA
FMLNDENVSVQKRVMLSVTQLYKFALQYICKQKAISEEFEHLWEMTNFIADVKKLFVSTL
MIILFQHCGFPCLDQGPRAWLNAVLFSLSVNLMAALGSLSAIARQRPAFMSIVVQAFESL
HANLPTSLSKSQVSSVRKNLKISASLLLSCLIVCFLVEFLPQITTLLTDLGASQAELQRN
MPKASAEKRRAEPEATVSAKKPKIDTEEVETMSTSEAVEMTAQDIIPRLNKDTVSNLVLV
SMLALPDSLPSHFHDTYTPIAAAGGQAQVVHLARLLATQMNAAKIGKGYEKMEELRKAAN
DPRLKEAAEIMSIPVIGGGVGSWGNNGNEAEENQMPQPEEDTALKRMLGGHFEVTKEKRP
LDIKKTPFVPKELAVPQLRMRKIKPFKLSDVTRELNPEERHKMMAEAVNRILGAESEFAR
LFVQERINLVVGLITQLGGDLRNVLLDFILEDIRARYDLLMSWLYQEYNASESEETSDEM
EFSQSYCDCLLSLMDGLYSSLDPKDKLFTRILLDVPALTDGAVMAIRMYCEDLDRLQVGF
SSLRELILKRPAAQLQLLQTLLELTTNEKEQVRVQAIHSGKKLHTRPELAEYIEKYALES
LQQLLADHPPAPVGQDPDEVIAPGEWSDDSIKLCLYLYLALLPQNHKLFHELAKVYTASS
QIIKRIILRHLEHPVCFFHVFLCLFSHKLSVQFSSPIVYKEKGVAFLYFIFIFFCTASSL
CFAEKTIYTQEVLAVVLHQLMEINPLPTLFMRTVIQSLSICPRLVGFVMNILAKLITKQV
WKQPKVWQGFVKCCQMTKPQSFSVLLQLPSRQLESVFEICPELKENLVAHVQSFTPHQRA
HIPRSLLQILEKEPKKEEKKIKQEKPDKEQIDPQDEENSANGEKSPKRSRSHTKESQKEK
RKSRRSRSRSRSRSPRKKKEKSSGEESASDGEVN
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatacccaaggcagtgttcgcctttcggtcgcttcgcaattctttcataac
ggtgatgcagacaccctagcagcaccaggagaagtagcaactgaagactcaacatcagag
aaggtcattgatttattgaatcaagcccaacttgaaaaagacaacaaacttaattgcttg
aaacaggttcaagagttcattctgaataaagatccaacattacttgataatttcctggat
gaaatccttgtgttccagcaagaccgatcggctgacgttcgacgatttgtggttggattt
attgaagaagcatgcaaaaaagacattgaactattgagcaaagtgcagaatacattagct
tttatgctgaatgatgaaaatgtttctgttcagaagcgtgtcatgcttagcgttacacag
ctctacaagtttgctttgcagtacatttgcaagcaaaaggcgatatcagaagagtttgag
cacttatgggagatgacaaacttcatagcagatgtgaagaaattgtttgtatcaacatta
atgataatattatttcaacattgtggatttccctgtcttgatcaaggacccagagcatgg
ttaaatgcagttcttttttcccttagtgtaaatctgatggcagctcttggatctctgtcg
gcaattgcacgtcaaagaccagctttcatgtcaatagttgttcaagcatttgaatcattg
cacgctaaccttcccacttcattgagcaaatcacaagttagcagcgtgcgaaagaatctc
aagatttctgcctctcttcttctttcttgtttgattgtttgtttcttagttgaatttctt
ccacaaataacaacccttctcaccgatcttggggcgtcccaggctgagctgcaaaggaac
atgccaaaagctagtgcggaaaaaagaagagctgaaccagaagccacggtttcagccaaa
aagccgaaaattgacactgaagaagtggaaacaatgtccacatcagaagcagttgaaatg
acagcacaggatattatcccacggttaaacaaagacactgtcagtaatctggtgttggtg
agcatgttagctcttcctgacagcttgccctctcactttcacgatacttatacgcccatc
gctgcggcgggaggccaggcccaagttgtacatcttgctcgtttgctggccacgcagatg
aatgctgcgaagattgggaaaggctacgagaaaatggaagaattaagaaaggctgcaaac
gacccaaggttgaaggaagccgccgagattatgtccatccctgtgattggcggcggtgtg
ggttcgtggggaaacaatggcaatgaagctgaggaaaatcaaatgcctcaacctgaagag
gatacagctttgaaaaggatgttaggtggacattttgaagtaacgaaagaaaaacgacca
ctggatattaaaaagacgccatttgttcccaaagaacttgctgttccacaattgcgcatg
cgtaaaatcaaaccatttaagttatctgacgtaaccagggagttgaacccggaggaaaga
cacaagatgatggctgaagcagttaacagaatacttggggccgaaagtgagtttgccaga
ctgtttgtgcaggagcgcatcaaccttgttgttggcctcatcacacaactaggaggagat
ttgagaaatgttcttctagactttatcctagaagacatccgcgcacggtatgatttgctt
atgtcgtggctttaccaggaatacaacgcatcagagagcgaagaaacgagtgacgagatg
gagttcagccaatcgtactgcgactgcctgctaagtctcatggacggcttgtattccagt
ttagatcccaaagacaaattattcactcgcattctgctggatgttcctgcgttaacagac
ggagccgtaatggcaattaggatgtactgcgaagacttggaccgcctccaagtgggattt
tccagtctgcgagaattgatcttaaagcgaccggctgctcagttgcagttgcttcaaacc
ttattggagcttacgacaaacgagaaggaacaagttagagtacaggcaattcactcaggc
aagaaacttcacaccagacctgagcttgcagaatacatcgagaaatacgctctggaatca
ctccagcagcttttggcagatcacccacctgcaccggtgggacaagatcccgatgaagtt
atcgcccctggggagtggtctgacgactccatcaaactttgtctttatctgtacctcgct
ctccttccacagaaccacaaactgtttcacgagctggcaaaagtgtacactgcttcctca
caaattataaaaagaatcatcctcaggcatcttgaacatccagtgtgtttttttcacgtt
tttctatgcttgttctctcataagcttagtgtacaattttcgtcaccaatagtttacaaa
gagaagggcgttgcatttctttattttatttttatttttttttgcacagccagcagcctg
tgtttcgcagaaaagaccatttacactcaagaagtcttggccgttgtcttgcatcagctg
atggaaattaatcctctccctaccctattcatgaggacggtgatccagtccctcagtatt
tgcccaaggttggtcggcttcgtgatgaacatactggcaaaactgataacaaaacaagtg
tggaaacaaccgaaagtctggcaaggatttgtaaagtgctgtcagatgacaaaaccccag
tccttctcggtcttgctccagcttccctctcgacaacttgaaagcgtgtttgagatctgt
cctgagctgaaggagaacttggtcgcgcatgtgcagtctttcactccacaccaacgcgcg
cacatccctcgatccttgctgcaaatcctcgaaaaggaacccaagaaagaagagaagaaa
ataaaacaggaaaaaccggataaagaacagattgatcctcaagacgaagagaattcggct
aacggcgaaaaatcgccgaaaaggtcacgatcgcacacgaaggagtcacagaaagagaaa
cgcaaatctcgccgatctcgctctcgctctcgctccagatcaccgcggaagaaaaaagag
aaaagttctggggaggagagtgcaagtgatggcgaggtgaactga
DBGET
integrated database retrieval system
