Acropora digitifera (stony coral): 107346041
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Entry
107346041 CDS
T04352
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107346041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107346041
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107346041
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_S1
CSD2
Rrp44_CSD1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
107346041
NCBI-ProteinID:
XP_015767293
LinkDB
All DBs
Position
Un
AA seq
992 aa
AA seq
DB search
MFVLANALQVSKVFLEIFESLDIQGVIFFQTVVNFVEHQGGRKLSTQLKNLVKDGRQQCI
IFSNEFCEGAYVARQTGESMEDWNWRCVYNGALWYHNHFKQTLPIIVLTEDSQAVENYGN
KNLGIFVLNVQDYLINFYPEVQSVLELYYSLAAVQAELNESGNCIHCACETVKQGRFIEG
RLNVNKHCAQDEAFVQKSGENMSSSKDFFDSDILVPGMANRNRAIHGDIVVVELLHKSQW
KGRSISIRNGEEDGKPSSGEEESDAMPTGRVVGVLQRNWRDYVASFDQNEETQGTRKTSG
KVVVVPWDYRIPKIRISTRQVDSLREERIVVRIDFWEIDSMYPSGHFVRSLGPIGDLETE
IQALMVEHSLAAPSFTEAQLRELPSNTPENPWVISEEEVAKRRDLRKSHLVFSIDPKGCE
DVDDTLSVRWLKNGKMELGVHIADVSHFVKPGSLTDLEARFRSTTVYLADRRFDMLPEVL
SADLCSLIGGVDRFAVSVLWILDAEYNVIKTWFGRTVIRSSYKLFYEAAQAIVNGDEKDE
DLIKDVPELQNLEAETAHNKLCEIRKSVSKLMDIARVIKARRTAHGALELDSVEVQVQLG
DKKDIKDLIPKKPLEIHETVAECMIFANHWVAKKIAESFPSTALLRYHPSPRKQRFANLT
HCAAAKGFSIDTSSNKSLADSLDDCVDPNDPNYNKIIRSLATQAMAIAHYFSTGSLSPEH
FFHYGLALDRYTHFTSPIRRYADVIVHRLLMAAVGNEGNDKLLSNKELQETCHHINKKHL
AAKDAQKESIDLFQSIFFQDLPLNDERRICDAVIFSLRANGVLVFVPRYGVKGPVYLKDR
TGQVVTPHVEEDSVVFGPGMLTRAVYHVTVRNTAGSFDFRLFDHIQVRISVNNSRAHAQS
LRLELQSMKTRQSPPLSEVEPQEEACHKMKRSELVKEVKSSREEQKGNMEIEKLDAELGK
LKSEFGQTHESVSFYFLMEYFREMSLQDDKDS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtgctggcaaatgctcttcaggtctccaaagtgttcttagaaatttttgagagt
ttggacatccaaggagtaattttctttcaaactgtcgtcaactttgttgagcatcaagga
ggaagaaagctgtctacccaattaaagaatcttgtaaaagatggtagacaacagtgtata
atatttagcaatgagttctgtgagggtgcatatgttgccaggcagactggtgaatcaatg
gaagactggaattggagatgtgtttacaatggagctctttggtatcataatcatttcaag
caaactcttccaattattgtattaacagaagactcacaggctgtggaaaattatgggaac
aagaatcttggcatttttgtcttgaatgttcaagactaccttatcaacttctatcctgag
gttcaaagtgttctagaattgtactattctctggctgcagtccaggctgaactaaacgag
tctggtaattgtattcattgtgcatgtgagacagtgaaacagggtcgttttatagaagga
cgcttgaatgtcaataaacattgtgcacaagatgaagcatttgttcagaagtctggggag
aatatgtcaagcagcaaagacttttttgattctgatatcttagttcctggcatggctaat
agaaaccgagccatccatggggatattgttgtagtggagttactccataaatcgcagtgg
aaaggcaggtcaatctcaattaggaacggcgaagaagatggaaagccctcctctggagaa
gaagaaagtgatgcaatgccaaccggcagagtggttggagtactgcaaagaaactggcga
gattacgtcgcaagctttgaccagaatgaggaaacacaaggaacaaggaaaacaagtgga
aaggtcgttgttgtaccatgggattatcgcattccaaaaatacgcattagtacacgacaa
gttgacagcttgcgagaggaaagaatcgtggtgcggattgatttttgggagatcgattcc
atgtaccctagtggccattttgtccgctccctgggtccgattggtgacctagaaacagag
atccaagcgctcatggtggagcactctttagcagcgccctcgtttacagaagcacaactc
agagagcttcccagcaacacaccagagaacccttgggtgatatcggaagaggaagtggca
aaacggcgggatttgaggaagtcgcacttggtcttcagcattgatccaaaaggatgcgag
gatgtggatgacacactgtctgtcaggtggttgaagaatggcaagatggagcttggagtt
catatagcggacgtgtctcactttgttaaacccggttcgcttacagacctggaagcaaga
tttagatccaccacagtatacctggcggatcgaaggtttgacatgttaccagaggtgctc
agcgctgatttgtgttctcttatcggcggtgtggataggtttgctgtaagcgttctatgg
attttggatgcggaatacaacgtgatcaagacttggtttggtcgcacggttattcgttct
tcgtataaactcttttacgaggcggcacaagccattgttaatggcgacgaaaaagacgaa
gatctcatcaaggatgtgcctgaattgcagaatctcgaggcagagacggcccacaacaag
ttatgtgaaattcggaaatccgtttccaaactcatggacatcgcaagagttataaaagca
agaagaactgcgcatggtgcgctggagctggacagtgtcgaggtacaagttcaacttggc
gataaaaaagacatcaaagatttaattcctaaaaagcctttagaaatacacgaaactgtc
gccgagtgcatgatatttgccaatcactgggttgccaagaaaatcgccgagtcatttcca
agcacagccctgttgcgttatcatccgtcgccgaggaaacaacgttttgcaaatttaact
cactgtgccgctgccaagggattttccatcgatacaagttctaataaatccttggcagat
tcgcttgacgattgtgtggatccaaatgatcctaactataacaagattattcgctcgctt
gcaactcaagcgatggccattgctcattatttctccactggctcgttgtcaccagaacac
ttctttcactatggcctcgcattggatcgctacactcatttcacatctccaataagaaga
tatgcggacgttattgttcacagactcttaatggctgctgttggaaatgaaggcaatgac
aagctcttatcaaacaaagaactgcaagagacctgtcatcatatcaacaaaaaacacttg
gctgctaaggatgctcaaaaggagtccattgatctcttccaaagcatcttttttcaggac
cttcctttaaatgacgagaggcgaatatgtgacgccgtcatttttagcctgagagccaat
ggcgttctcgttttcgtaccacgatatggagtaaagggtccagtttatcttaaggacaga
acaggccaagttgttacccctcatgtcgaagaagattccgttgttttcggcccaggaatg
ctgactagagccgtgtatcacgtgactgtaaggaataccgctggctcgtttgatttccga
ctgtttgatcacatacaggtacgaatatctgtgaataattcccgcgctcatgctcagtct
ctcagactggagcttcagtcaatgaaaacgaggcagtcgccgccactgagtgaagtagaa
ccccaggaagaagcctgccataaaatgaagaggagtgaacttgtcaaggaagttaagtcc
agtcgcgaagaacagaaaggaaacatggaaattgagaaactggatgctgaacttgggaag
cttaaatcagaatttggtcaaacacacgagagtgtgagcttttatttcttgatggagtat
ttcagagaaatgtccctccaagacgacaaggacagctga
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