Acropora digitifera (stony coral): 107346148
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Entry
107346148 CDS
T04352
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03030
DNA replication
adf03410
Base excision repair
adf03420
Nucleotide excision repair
adf03430
Mismatch repair
adf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107346148
03410 Base excision repair
107346148
03420 Nucleotide excision repair
107346148
03430 Mismatch repair
107346148
03440 Homologous recombination
107346148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adf03032
]
107346148
03400 DNA repair and recombination proteins [BR:
adf03400
]
107346148
Enzymes [BR:
adf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107346148
DNA replication proteins [BR:
adf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
107346148
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
107346148
MMR (mismatch excision repair)
DNA polymerase delta complex
107346148
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
DNA_pol_B_exo2
Tnp_IS2_N
Motif
Other DBs
NCBI-GeneID:
107346148
NCBI-ProteinID:
XP_015767405
LinkDB
All DBs
Position
Un
AA seq
1376 aa
AA seq
DB search
MDGTQKRKGSPDQSSSAKRSRNENDSSSHGGSFEKELAEFREDTVAYRNPTANWPRPPVP
NLNPSTDKIVFQQLELDHYVVDGLDKAVLSDMRSNKDSISHAVLAVECEMKESIYGFHGN
RKIPFLRITMALPRLIAPAKRILETGFKFASFPDRGYSTYESNIDYEVRFMVDTEVVGCN
WIELPAGKYKVRSPATIDDSYKTGVQPKSYCQIEVDIAYDEFISHTPEGEWSKVAPLRIL
SFDIECAGRKGVFPEPEKDPVIQIANMVINQGDRDPFIRNVFTLNSCAPIVGSHVLSFPQ
EGNMLQKWSEFVKRVDPDIITGYNIVNFDLPYLLNRAAALKVQTFPFLGRVRDEKSTISN
TTFQSRAYGKRENKVINIAGRAQFDLLHALLRDYKLRSYTLNAVSFHFLQEQKEDVQHSI
ITDLQNGNDQTRRRLAIYCMKDAILPLRLLEKLMCIINYMEMARVTGVPLSYLLSRGQQI
KVVSQLLRMSRKQDLLLPAHKAEAGEEYAGATVIEPSKGYYDIPVATLDFASLYPSIMMA
HNLCYTSLLHQSDLKSLKPDEFIKTPSGDHFIKASIRKGLLPEILENLLSARKKAKDDLK
KETDPFKKKVLDGRQLALKLSANSVYGFTGAQVGKLPCLPISQSVTAFGRMMIERTKELV
ELKYTVENGYKTNAKVIYGDTDSVMVKFGVESVAESMELGREAASYVSGHFVKPIKLEFE
KVYFPYLLISKKRYAGLYFTKPDKHDKMDCKGIETVRRDNCPLVANLINSCLQKILIERD
PMGAVEYTKQVISDLLCNRIDISQLVITKELTKTGDEYAGKQAHSELAERMRKRDAGSAP
KLGDRVPYVIIAGAKGEKAYEKAEVLKFTFLWLTASYNVLLNNHSSEVVRRKQSTSSPDE
DWHLKPDEFIKTPSGDHFIKASIRKGLLPEILENLLSARKKAKDDLKKETDPFKKKVLDG
RQLALKLSANSVYGFTGAQVGKLPCLPISQSVTAFGRMMIERTKELVELKYTVENGYKTN
AKVIYGDTDSVMVKFGVESVAESMELGREAASYVSGHFVKPIKLEFEKVYFPYLLISKKR
YAGLYFTKPDKHDKMDCKGIETVRRDNCPLVANLINSCLQKILIERDPMGAVEYTKQVIS
DLLCNRIDISQLVITKELTKTGDEYAGKQAHSELAERMRKRDAGSAPKLGDRVPYVIIAG
AKGEKAYEKAEDPIYVLENNIPIDTKYYLENQLSNPLLRIFEPILGEAKATSVLLKGQHT
LTKTIVTSKVGKLAMFTKKRSTCIGCKSVLDNDGAAVCKHCKPKESALFQKEISHLNALE
EKFARLWTQCQNCQGSLHADVLCTSRDCPIFYMRKKVQKDLSDQDKLIQRFGDFTW
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggacggaacgcaaaagcgcaaggggagcccagatcagagcagctctgcaaaacgctct
cgaaacgaaaacgatagttctagccatggtggaagctttgagaaagagcttgcagagttt
cgcgaagatacagtagcttacagaaatccaactgcgaattggccacgacctcccgtgccc
aacttgaacccttcaactgataaaatcgtgtttcagcagctggaattggatcattacgtc
gtggatggacttgacaaggctgtgttgagtgacatgagatctaacaaggatagcatatct
catgctgtcttggctgttgaatgcgagatgaaggagagcatctatggtttccatggtaac
agaaagataccattccttcgcatcacaatggcactgccaaggctcattgcaccagcaaaa
cgaattttggagacaggattcaagtttgcatcatttcctgacagaggttattccacttat
gaaagtaacattgattatgaggttcgattcatggtagacactgaagttgttggttgcaac
tggattgagcttcctgctgggaaatataaagtgcgctcccctgctaccattgacgacagt
tacaagacaggggtacagcctaaatcatactgccaaattgaagtggatattgcatatgat
gagttcattagccatacccctgaaggtgaatggtcaaaagtagcacctctacgaattttg
agttttgatattgagtgcgccggcagaaaaggtgtctttcctgaaccagaaaaggaccca
gtgattcagatcgctaacatggttattaaccagggtgacagagaccctttcatcagaaat
gtttttacgttgaattcttgtgcacccattgtcggatctcatgtgctgtcatttccgcaa
gaaggaaatatgctgcagaaatggagtgagtttgtcaagagagtggatccagacatcata
actggttacaatattgtgaattttgatctcccatatctgctcaacagggcagctgccctc
aaagttcaaacatttccctttcttggaagagtaagagatgaaaaaagcaccatatctaac
actacgtttcaatctcgtgcttacggaaagcgagaaaacaaagtcataaacattgctggt
agagcgcagtttgatttgctgcatgctttgttaagagattacaaactaaggtcctataca
ctgaatgctgtcagttttcattttctgcaagaacaaaaagaggacgtacaacatagcatc
atcacagacttacagaatggaaatgaccaaacgcgtcgtagacttgcgatttattgcatg
aaggatgcgattttaccattgagattgcttgagaaactgatgtgcattataaactacatg
gagatggcccgtgtaactggagtgccattgagttacctgttatccagagggcaacaaatc
aaagttgtctcacagctgctcagaatgtccagaaagcaagacttgttactccctgcacac
aaagctgaagcaggagaagaatacgctggagctaccgtcattgagccatcgaaagggtac
tatgatattcctgtggcaactcttgactttgcttctctatatccttctatcatgatggcc
cataacctgtgctatacatctctccttcaccaaagtgacctgaagagtttgaaaccagat
gaattcatcaagacaccttctggtgatcattttattaaagcctcaatcaggaaaggactg
ctgcctgaaatcctggagaacttgttgtctgcaaggaagaaggccaaagatgatctgaag
aaagaaacagatcctttcaagaaaaaggtgcttgatggtcgacagttggctttgaagctc
agtgccaactcggtgtatggttttactggggctcaagtcggtaaactaccttgtttgcca
atctcacagagtgtgacggcatttggccgtatgatgatagagaggactaaagagcttgtg
gaattgaagtacacagtggaaaatggctacaagacaaatgcaaaagtcatttatggcgac
actgactctgtgatggtaaaatttggtgtggaatctgttgcggagagcatggaacttggt
agagaagctgcatcatatgtctcaggacattttgtgaaacccatcaagctagaatttgaa
aaggtatattttccttatcttctgataagcaagaaacgttatgctggcttgtacttcact
aaacctgacaagcatgacaagatggattgcaaaggaattgaaactgtgaggagagacaac
tgtcctctggttgccaatcttatcaattcatgcttacagaagatcctcattgaaagggat
cccatgggagcagtggaatacactaaacaagtcatatcagacttgctgtgcaatagaatt
gatatctcacagcttgtcattacaaaagaattgaccaagacaggagatgaatatgctgga
aagcaggcacactcagagctggcagaaagaatgcggaagcgagatgcagggtctgctcca
aagctgggggacagagttccttatgtcataatagctggtgccaagggtgaaaaggcatat
gaaaaagctgaggtattaaaatttacatttttgtggcttactgcctcttataatgtcctt
ctgaataaccattctagtgaagttgtcaggcgtaagcagtccacatcatcacctgatgaa
gactggcatttgaaaccagatgaatttatcaagacaccttctggtgatcattttattaaa
gcctcaatcaggaaaggattactgcctgaaatcctggagaacttgttgtctgcaaggaag
aaggccaaagatgatctgaagaaagaaacagatcctttcaagaaaaaggtgcttgatggt
cgacagttggctttgaagctcagtgcgaactcggtgtatggttttactggagctcaagtt
ggtaaactaccttgtttgccaatctcacagagtgtgacggcatttggccgtatgatgata
gagaggaccaaagagcttgtggaattgaaatacacagtggaaaatggctacaagacaaat
gcaaaagtcatttatggcgacactgactctgtgatggtaaaatttggtgtggaatctgtt
gcggagagcatggaacttggtagagaagctgcatcgtatgtctcaggacattttgtgaaa
cccatcaagctagaatttgaaaaggtatattttccttatcttctgataagcaagaaacgt
tatgctggcttgtacttcactaaacctgacaagcatgacaagatggattgcaaaggaatt
gaaactgtgaggagagacaactgtcctctggttgccaatcttatcaattcatgcttacag
aagatcctcattgaaagggatcccatgggagcagtggaatacactaaacaagtcatatca
gacttgctgtgcaatagaatagatatctcacagcttgtcattacaaaagaattgaccaag
acaggagatgaatatgctggaaagcaggcacactcagagctggcagaaagaatgcggaag
cgagatgcagggtctgctccaaagctgggtgacagagttccttatgtcataatagctggt
gccaagggtgaaaaggcatatgaaaaagctgaggatcctatctacgtgttggaaaataac
atccccattgacaccaagtactaccttgaaaaccaattgtcaaatccactgctcagaata
tttgaaccaattcttggagaggcaaaagcaacgtctgtattgctaaagggtcaacatact
ttgacaaagaccatagtcacgtcaaaagtaggcaaattagcaatgttcaccaaaaagaga
agcacttgtattggctgcaaatcagtcttggataatgatggtgcagctgtctgcaagcat
tgcaagccaaaagagtcagcacttttccaaaaggagatctcacacctgaacgccctggag
gagaagtttgccaggttatggacacagtgtcagaattgtcaaggaagcttgcatgccgat
gttctgtgcacaagtcgggattgccccatattctacatgagaaagaaagttcagaaggat
ctctctgaccaggacaaactcatccaaagatttggtgacttcacttggtga
DBGET
integrated database retrieval system
