Acropora digitifera (stony coral): 107349177
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Entry
107349177 CDS
T04352
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03013
Nucleocytoplasmic transport
adf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107349177
03015 mRNA surveillance pathway
107349177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107349177
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107349177
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107349177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
107349177
NCBI-ProteinID:
XP_015770767
LinkDB
All DBs
Position
Un
AA seq
470 aa
AA seq
DB search
MADEDWAAEVDEQERQISGQVDQMKISNTTAATEQKKAEDDDSSPDVVAEASYLAKVLRN
KLVQTNNEVEVLRNDPSSPLHSVKSFEELPLSEQLRRGVYDMGFNSPSKIQETALPMLLA
DPPNNMIAQSQSGTGKTAAFVLSMLSRVDATQNYTQVICLSPTYELALQTGQVAEKMSKF
CPEIKIGYAVKGERVSPRHKVTDHILFATPGTMLDWICRHKAVDPRKIKMFVLDEADVMI
AIQGHQDQSIRIRKNLSKDCQMLLFSATYDDEVIKFANTVVPDPIVIRLRREEESLDNIK
QYYVVCRDQEDKQQALSNMYGVVSIGQCIVFCHTRRAASWLATKMTAEGHSVALLSGELT
VEQRLAVLNRFRDAKEKLLITTNVCARGIDVEQVTVVVNYDMPIDTNGKPDFETYLHRIG
RTGRFGKNGIAVNFIDGQRSMNIMKKIQEHFGKKISLLETNDVEELEKLS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaagactgggcagctgaagttgacgaacaagagcgtcaaatttctgggcaa
gttgaccagatgaaaataagcaataccacagcagccactgaacaaaaaaaagcagaagat
gatgacagttcaccagatgttgttgctgaggcttcatatttggccaaggtgttgaggaac
aaacttgttcagaccaataatgaggtggaggtactgagaaatgatccaagctcaccgttg
cactctgttaagtcgtttgaagagctacccttgtcggaacagctgcgccgtggtgtttat
gatatggggttcaacagtccttccaagattcaagaaacagccttaccaatgcttctagct
gatccaccaaacaacatgatagctcaatcacagtctggaacagggaaaactgcagcattt
gtattatcaatgctgagcagagtagatgcaacacagaattatactcaggtgatctgtctt
tcaccgacatatgaactggctcttcagacgggtcaagttgccgagaaaatgagcaaattc
tgtccagaaattaagattggctatgcggtaaagggagagagagtatcacctcgtcacaaa
gtgacagaccacattttatttgctacacctggaactatgttggactggatctgtcggcac
aaagcagttgacccaaggaaaatcaagatgtttgtgctggatgaagcggatgtcatgata
gcgatacagggacaccaagaccagtccatcaggatacgcaaaaacctaagcaaagactgc
cagatgctcctgttttcagctacttatgatgatgaagtaataaagtttgccaatacagtc
gtgccagatcccatcgtcatccgcctgcgtcgggaagaggagagcctggacaacattaaa
cagtattatgtggtgtgccgagaccaagaggataaacagcaggccctctccaacatgtac
ggcgtggtctccatcggacagtgcatcgtattttgtcacactcgcagggcagcgtcgtgg
ttggcaacgaaaatgactgctgagggacactcggttgcgctgttatcgggcgaactcaca
gtggaacagcgcctggccgttctgaacagatttcgcgacgcgaaagagaaactactaatt
acgacaaatgtgtgcgcacgaggaatcgatgtcgaacaggtgactgttgtggtgaattat
gacatgccaatagataccaatggcaagccggattttgaaacatacctacacaggattggc
aggacaggccggtttggcaagaatggtatcgcggtcaattttattgacggtcaacggtcc
atgaacataatgaaaaagattcaagaacatttcggcaagaaaatctctctacttgaaacg
aatgacgtcgaggaattggagaaactaagttga
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