Acropora digitifera (stony coral): 107349778
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Entry
107349778 CDS
T04352
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adf03009
]
107349778
Ribosome biogenesis [BR:
adf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107349778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20
UTP20_N
UTP20_C
BIG2_C
TPR_Trm732_C
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
107349778
NCBI-ProteinID:
XP_015771450
LinkDB
All DBs
Position
Un
AA seq
1874 aa
AA seq
DB search
MSKFFLDNLNIPQDALMDDRRLALIWGVLVCLPCIKPLDTSRCCGKLRGMIQSTIELLLS
NERARHRVACLSVLSQAIQSFSLLGSTEDQRTFVLDFNFFRTLISSWPNSIHILQACHKL
VTVASQQEIQGFLTAENLSETYSFVRLNLCSASHVIRLATLKILACFDQHEMPLASSKYA
LFQLCARVEEIPVRLDSYRDRLLRIQDLRYSSTYFGSLPQFYFEAAVLYLCGMLYVNFNL
LWDPVIELITSFTRGDDAKHFWEIYRDLLNTAADKAESELNRGMESGNPHQAVTRKSESE
NGDPMETLEDIFANYNSYSHGPQHENRGDHTNFRYLLWKAMASFPKVAERRSADVVPLFL
RFVSPPSGYSLENRPSYGTLLVLPHLSEILECLSRSVKQAVENNEKIQGKFRLAIPPREL
SVLSKLSPFVQDAKQSATLLEALIPSLSDARKEEAANRILATVKGLLANVESPMTFVIPL
CKPFSWIKDRSTRQCLCEVFLKLSNIDPGFSLKASELLRMINSWDDKRLEEPDYDTRLAG
FAEVRACLQRGELKEEEILAILNNCIYFVLNSTDMSLRDSGGSSMSCILRYVLQKSAENK
EAFNLLVIENLLPACKKAIASKNEFARNEFLSLLSMMVRGCEHESWSDLTVLLNDDPEKD
FFENMKHIQLHRRVRALRLLQLHCQKHTFKTATLTSYLLPLATRCIFENKDSHLISEGIT
TIGAISAILPWYHYCNLLRQLELACDGGSRRENDFPLHQPSFDARSSVDVKIYDIRFGGR
GKEGKSFWRPSVSGRSPRSLLLLAPNPPAWVRVGRLACGPASSTDLTFIHCVIPTFCHFK
FVIVYYTIPFHRVVVIILNNFHFDLSSVSDQSESFSPIESHVEKDNVSQNATVDKEGKDP
NVASEIEADAKNDDKESNKGDDQGDFDDHDDGEDYAADEKTTDEDPLDIYKTISLSILPE
LQKYATKERTSDSFHRLSRMKAEDEKEILRVPVILAIIKLLQALPEHALHLHLPGLLLKA
CNILKSKSNEVRVAARETLTKITISLGIKYLPFIVEQLRGVLRTGYQLHVLSFTLHRLLE
KLSSSLNPGDLDPGLQDIVEILDSTKSQKTARLVEEVLRRISVGLQSNQSMTVPLQLIFI
HGLASENMTLLKPKPVNNTVAPEVADIRLRPESSLLLPPSPKRGGNVPQPNEKTNHHILI
EFGLQMLYLLLKQGKISTSNEEQLRMLDPFVELLTDCLESKHNKMVTVAVRSVCQLVKFP
LPSLALFVPKIGKQLFHLLKMYARAGAKVGENYEMVLSAFKGMTVIIRNHKHFKVAEKQL
QVLLGFVEEDIHDHSKQGAAFPLLKAILSRKLIVPEIHDVMGKVGQLSITSSSQNVQLQC
RQCLLLFLLDYPLGKKLQGYLEFYVSQLGYEYDRGRQSALEMLGSMFSSFPEETLAENAS
FFFIPLTTRLVNDDSANCRQLAGYTIQLLLKKLDADQRNKLFSITLLWFKDEKVAVQRLA
AQVWGLFVEVEGKNFDRKLTNLLPIISDAIVPERFEGEECGNDKEVDSNGQIAKRPKDHL
LFNVLSLLAKIMKECQVIKNPSRQEEMTKIWGSVEEHLLHPHVWVRLASSRLLGLLFAAW
KPEELVTNFLEGKTSRSYLQQDLPAKVTKLCEVICRQFRSQLLNSELGEQMVKNLVFLAK
TLQILSSEGSPKAENNRDLHSSNENLTSKEGPLTLKDLLRKLNKEATLEDSLATRQTQKR
NCVLRLVSAVAINLGRDGVEPFLTDILKPIHRELEVPSSFKDPDLKTLALEALDLIKGLA
KRDAVSQAYAILQKATIKTRETRRKKKALEAVADPLMAARKKVKKNQAKEASRKRKLDRL
RPERRLKAPRMQNA
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttcttcttggataacttgaacattccccaagatgcgctgatggatgacagg
cgcttagcattgatttggggtgttctcgtatgtctaccctgtatcaagccattagacact
tcccgttgttgcggaaagcttcgtggaatgattcaatctaccattgaactgctcttgtct
aacgagcgggctagacaccgtgtggcttgcctgagtgtgcttagccaggccattcagtcg
ttcagtttactagggtccacggaagaccagcgcacattcgtcttagactttaacttcttt
cggacattaatcagctcatggcccaacagtattcatattcttcaagcttgtcacaagctg
gtgaccgtagcaagtcaacaggaaatccagggctttctcaccgcggagaacctttcagaa
acctacagttttgtccgtttgaatctatgctcagctagtcatgtcatacgtcttgctact
ctcaagatactggcttgttttgatcaacacgaaatgcctctggcctccagcaaatacgcg
ttgtttcaattgtgtgcgagggtagaagaaatcccagtacgcttagatagttacagagac
cggctgttgcgtattcaggatcttcgctactcttctacttacttcggctctttgccacag
ttctactttgaagccgctgtactgtacttgtgcggcatgctttacgttaattttaatctt
ctgtgggatcctgttatcgaactcatcaccagtttcactcgtggcgacgatgcaaagcac
ttctgggaaatttatagggatctccttaatacagcagcagacaaagcagagagcgaacta
aacagaggaatggaatcagggaatcctcatcaagcagtcaccagaaaaagcgaatcggaa
aacggcgacccaatggagacccttgaggatatctttgccaattataacagttactcgcat
ggtccacaacatgaaaacagaggtgaccatacaaacttccggtatcttttatggaaagca
atggcatcttttccgaaagttgcggaacgtaggtcagctgacgtggtgccgctgtttcta
agatttgtcagtcctcccagtggttacagtctggaaaacagacccagttatggaactcta
ttagttctaccacacctatcggaaatcctggaatgtctcagtcggtcggtgaaacaagca
gtggaaaacaacgagaaaatccaaggcaagttcaggttagccattccacctcgtgagctt
tcagtcctgtccaagttgagtccatttgtgcaagacgctaaacaatctgcaaccctgttg
gaagcattgataccctcgttaagtgacgcgcgaaaggaggaagcggcgaacagaattctg
gcaaccgttaaaggactgttagctaatgtcgaatcaccaatgacgtttgtcattcctctt
tgcaagcccttctcgtggattaaagaccgaagtacaaggcagtgtttgtgtgaagtgttt
ttgaagctttccaatatcgatcccggcttctctttgaaggcctctgaactactccgcatg
ataaactcttgggatgacaagcgactcgaggagcctgattatgatacaagactcgctggg
tttgctgaagtacgagcttgccttcaacgaggtgaattaaaagaggaggagattctggca
atccttaacaactgtatttacttcgttttgaacagtactgacatgtctctgagagatagt
ggcggtagctctatgagttgtatcttgcgatatgttcttcagaagagtgcagaaaacaaa
gaagcgtttaatctcctcgtcatagagaatctgcttccagcatgcaagaaagccattgct
tcgaaaaatgagtttgcgcggaacgaatttctatctctgctgtccatgatggtgcgcggc
tgtgaacacgagtcgtggtctgatctaactgttttgttgaacgatgatcccgagaaagac
ttctttgagaacatgaaacacatacagcttcatcgccgtgttcgagcgctgcgcctcctg
caattacattgtcagaagcataccttcaaaaccgcaaccctgacttcatatttgttgcct
ttggcaacacgttgcatatttgaaaacaaggatagccaccttattagtgagggtatcacc
accattggagcaatatcagcgatccttccttggtaccactactgtaatttgttgagacaa
ctggaactagcatgcgatggaggctctcgtagggaaaatgattttcccctgcatcagcct
tcattcgatgctcgttccagtgtagacgtcaaaatatatgacataaggtttggtgggcgt
ggcaaggaggggaagagtttttggcgaccttcagtttcaggtaggtcgccaaggtccctg
ctccttttagccccaaacccccctgcctgggttagggttgggcgtttggcttgcggccca
gcatcgtcaactgatcttacctttatacattgtgtgataccgactttctgccattttaaa
ttcgtaattgtatattatactattccttttcatagggtcgttgtgatcattttgaacaat
tttcactttgatctaagctccgtttctgatcaatccgaaagcttctcaccgatcgaaagc
catgtagaaaaggacaacgtgagccaaaacgcgactgttgacaaggaaggaaaagaccct
aatgttgcaagtgaaatcgaagctgacgcaaagaatgatgataaggaatcaaataaagga
gacgatcaaggtgattttgatgatcacgatgacggtgaagattatgctgctgacgaaaaa
acaactgacgaggatcctttggatatttataaaacgatatcactttctattctgcctgag
ttgcagaagtacgccaccaaagagaggacgtcggactcctttcatcgactgagtcggatg
aaagctgaggatgaaaaggaaatattgcgtgtgcccgttattcttgctatcatcaagctc
ctgcaagccctacccgagcatgcactgcacttacatctaccaggacttctcctgaaggct
tgtaacatattaaagagcaaaagtaacgaggtgcgtgttgcagcaagggaaaccctgacg
aaaatcacgatctctcttggaatcaagtatttgccttttattgtggagcaactccgcggt
gttcttaggactgggtaccagcttcatgtactcagtttcacgttgcacaggttgctagag
aaattgagtagctctctcaatcctggtgacctggatcctggtcttcaggacatagtggag
attctagattccactaaaagtcaaaaaacagctcggcttgtcgaagaggttttgaggaga
ataagtgttggtctgcaatcaaaccagagcatgactgtgcctttacagttgatctttatt
catggacttgccagtgagaatatgacgcttctgaaacctaaaccagtgaataacactgtt
gctccggaggtagctgacataagactccgccctgaaagttcgcttctacttccacccagc
cctaaacgcggtggaaacgtcccacagcccaatgaaaagacaaaccatcacattttgata
gagttcggccttcagatgctgtacttgttgttgaaacaaggtaaaatttccacttctaat
gaggaacagctgcgaatgttggacccatttgttgagttgcttactgactgtctggaatcc
aagcacaataagatggtgacggtagctgtgcgttctgtttgccagttggtgaaattccct
ctgccttccttagcactctttgttcctaagataggaaaacaactcttccacttgctcaag
atgtatgccagggccggtgcaaaagttggcgagaattatgagatggttctgtctgctttc
aagggtatgacggtcattatccggaaccataaacatttcaaggtggcagaaaagcaactg
caagtcctgttagggtttgtggaggaagatatccatgatcacagcaagcaaggggctgct
tttccacttctcaaggctatcctttctaggaaactgattgtccctgaaatccatgacgtc
atggggaaggttggccagctatcaatcaccagtagctcgcaaaacgttcagcttcagtgc
agacagtgtttgcttttgtttcttctggactatcctcttgggaaaaaactgcaaggatac
ctggagttttacgtatctcagctcggatatgaatatgataggggccggcagtcagcttta
gagatgctaggatccatgttttcttcgtttcctgaggaaaccctcgctgagaatgctagt
ttcttttttataccgctgaccacccgtttggtgaatgacgattcagctaattgccgtcaa
ctagcaggttatacaatccaattgcttttgaagaagcttgacgccgatcaaagaaacaag
ctattttctattacgcttttgtggttcaaagatgagaaggttgctgttcagcgccttgca
gcccaagtttggggcttgttcgttgaagttgaaggaaagaatttcgacaggaagttgacg
aacctactgcctattatatctgatgcgatagtcccagaacggtttgaaggggaggaatgt
ggtaacgataaagaagttgacagtaatggtcaaatcgccaaacgccccaaagatcatttg
ctattcaacgtgctctcgctgctagcaaaaatcatgaaggaatgccaggttatcaagaat
ccaagtaggcaggaggaaatgacgaaaatttgggggtccgttgaagagcatttactccat
ccacatgtctgggtccggctggcttccagtcgactccttggacttctcttcgctgcctgg
aaacctgaggaactggtgactaattttctagaaggaaagacgtcaagaagttatcttcag
caggatttgccggcaaaggtaactaagctgtgcgaggtcatttgtaggcagtttcgctca
caacttttgaacagcgaattgggagaacagatggtaaagaacttagttttcttagccaaa
acgctgcagattctgtccagcgaaggttctccaaaagctgaaaacaaccgagaccttcac
tcctctaacgaaaatctcaccagtaaagaaggtcctctgacactcaaagatcttttgaga
aaattgaataaggaagcgactttggaagattccttagccacaaggcaaacacagaagagg
aactgtgtgttgagactggtgtctgcagtcgccattaatttaggaagagatggagttgaa
ccgttccttacagacattttaaagcctatccacagagaactggaggttccttcgtcattc
aaagatcctgatttgaaaacgcttgcgctggaagcactagatctcatcaagggtcttgcg
aaacgagatgccgtatctcaggcgtacgctatacttcaaaaagcaacgataaagacacgc
gaaacacgcagaaagaagaaagcactagaggcagtcgcggacccgttgatggctgctcga
aagaaagttaaaaagaatcaggccaaggaagcctcaagaaaaagaaaactcgatcgtctt
aggccagaacggagattgaaagcacctagaatgcaaaacgcgtaa
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