Acropora digitifera (stony coral): 107349998
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Entry
107349998 CDS
T04352
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
adf04121
]
107349998
Ubiquitin system [BR:
adf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107349998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
107349998
NCBI-ProteinID:
XP_015771684
LinkDB
All DBs
Position
Un
AA seq
1831 aa
AA seq
DB search
MELWYQWEENTEERLSFDDSDRFEEDSLCSWASEPESLCNNWRGWKRNSQTAVEMNSELG
ESKFDSLMEICARTVAKHLPFEAVERAYPQIPEQLQLRIAFWSFPPFEEDVRLYSCLANG
SPDKFNEGEKLLNVQAVKDALQIGFHLSATVHQPYGLNCQSKGTFNVAVTFDRGRITSCY
CTCQKSASWCAHVIALCLFRIHFPDNVCLRAPVSEYLSRLKRDQLQKFAQYLISELPQQL
LPTAQRLLDELLSSQESVINLVQGAPDPTAGPSEADYSKWCLDEASLHENIKRMLIRFCG
PSPLVFSDVNALYLANTAPPTAAEWSNLLRPLRGREPEGMWNLLSIVRELFHRGDLNAVN
LLVILTEECLANDQVMVWWFDSRSQASGNSLSHSVGNRGNTNAASNEATKHACAGFCDEL
VSLWRLAVLNPKLTDAEREEMKLQLQEWHDKALARGGQAGRGGGHVVSQTAVSCFPGFLA
AIEACDLDWRNVELGLESEDNVLQVTQARRHPCAGVCYPEAGKHTDTVHVGAIHDSIAPT
DKKDLEQKTYGEPYKQEENAANSPVSDVSFAGQDMNEDLEVLCARTEALHVHGYREMAGK
LAVKLAENILNNGNNLVPFSHSGGTRNKRRGPGKGSFARSIFVKAAFLCSVLEDDLHLHH
LAFRVGMMGLEMPRQPARSKALEVKLCYQESELATLLKRLPLGPAELAVIREKAELLFHG
KLKRGEAVLPIMLATFIFDVLCPCSSGSSKRQVTGKLCETNKEDEALGFKAALYALGMKG
NALETQYPMLCEGTRRQRGDLAQALLFHNKDDNGRIREIMDVLLDKDRYDLPNATRERQN
KKKEEKNDCQDNKSQSSETSNDDTVSNRSNIGLPTRQGNNGQSSSSTSDSGTDKSKDRSK
PRVLVSRIQAPKSFITVQSASLDDESGTSSGVDTDPLPTSRDQERLITVEVVEVAPTKTG
ETGKGDISNSDEAKSVFLSSPQGAASFAADNLQPNVPGTEIRNRSSSFLVSLGTAYDKEV
VCSSHYKQEDSFHPNFLTNPNDVNPGLSLYNGNERCDDKESLDFDRPAGDLSCNAGAVPC
ANLSGEGVSDLADNDPRINEMPVSGLPLLYSNEIYPRDDLSREEVSAAMSSGASLDGSSL
VNKPPPSSISSGNNSFSCKRAEIERGNPAFSQYHSSEGDVSDIEADIEESHLKLSKLQVF
ESPAAAGTSSDSSPTSYPSGPTAFFESEPSASGESSYSGANLGHEYDGADAACVIVPALE
EVSEEQSSGSGARGSSNSVESCRGRRRSRIRRRRRRGKLALYQATEAEAHFMFELAKTVL
TKAGGNSSTSVFTQTTNTDTQTGPHRGLQLCAFEIGLFALGLHNGTSRNWLSRTYSSHVS
WISGQAMEIGHQAIAILLDHWEGNLTPSEVASIADRASRSNDRTMVNAAAKLGLSCLHMA
TTLNPVEIQRALSQCREEDSQLLDQACQAVESAALGGGVYPEVLFNVAKHWFYLHEKDQL
SNSTSRPSKNEARNRGSLSRPAQSTTSSSHSPPLSPFAAQISQFTIPPSYSSIPPPLYTT
PAQYVHQKMHHQVHQMMGHYSAYLPPNCTGYRAGSQPYYSYPFSRTLPDSQFSLSGAYTG
LTPPPYQVSNVTANPSQHMNRLLTTQQGTQISYYLNSAYRAGMLALEVLSRRASDDRPVV
KFSRNPSYSEDIRWLCTLSAKLGTSHLQGFCVATLNAVVSPFVLHELALEAARHMARSNP
SQLAANLRSPTISPLVQKSLTMYAQCIHYNLISISQNEYDEFVELLRHARGAFCMAPGGM
TQFNELLQSIRRGHSKKKDLWQMIIAGLAKA
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtggtatcagtgggaagaaaacaccgaagaacgcctttcttttgatgacagc
gatcgttttgaggaagactcattgtgttcttgggcctcagaaccagaaagcctttgtaac
aattggcgaggatggaaaagaaattcccaaactgcggttgaaatgaattcagagctcggc
gaaagcaaatttgactctctgatggaaatatgcgctaggacagtggcaaagcatttacct
tttgaagctgttgaacgggcatatccacagatacccgagcaacttcaactgaggattgct
ttttggtctttcccaccttttgaggaagatgtaagattgtattcttgtctcgcaaatgga
tccccggataaatttaatgagggagagaaactgttaaatgttcaggcagtgaaagatgct
cttcagattggttttcacctgagtgccaccgttcaccagccatatgggctaaattgccaa
agtaaaggaactttcaatgttgctgtcacatttgacagagggcgtatcacatcttgttac
tgtacttgtcaaaaatctgcgtcttggtgtgcacacgtaattgctttgtgtctgttcagg
attcactttcctgacaatgtctgcctcagagcaccagtgtctgaatatctatcacgactg
aagcgcgatcagttgcaaaagtttgctcaatatctgatcagtgaattgccccaacagctt
cttcccactgctcaaagacttttagatgaattgctgtcatcacaggaatctgtcatcaac
ttagtacaaggagcaccagatcccacagctgggccatcagaagcagattattcaaagtgg
tgcctcgatgaagcctccctccatgaaaatatcaaaaggatgctaattagattttgtggt
ccaagccctttggttttcagtgatgtcaatgccctgtatttagccaatactgccccaccc
accgctgctgagtggtcaaatttgcttagaccattaagaggtcgtgaaccagagggaatg
tggaaccttctctccatcgtgagggaactatttcatagaggtgacttgaatgctgttaac
ctcttggtaattttaacagaagagtgtcttgcaaacgatcaagtaatggtatggtggttt
gatagtcgaagtcaagcctctggaaattccttgtctcacagtgttgggaaccgtgggaat
acaaatgcagcaagcaacgaggcaaccaagcatgcttgtgcaggtttttgcgatgaactg
gtgtctctatggagactggcagttctgaatcccaagctcacagatgcagagagagaggaa
atgaagctgcagttgcaggagtggcatgacaaagcattagcaagaggaggacaagcagga
agaggtggcggtcacgttgtttcacagaccgcagtgtcctgttttccaggctttcttgct
gccatagaggcttgtgatttggactggaggaatgtagagcttggactggaatcagaagat
aacgttcttcaagtaacacaggctcggagacatccttgtgcaggagtgtgttatccagaa
gcaggcaaacacacagatactgtacacgttggtgcaattcatgacagtattgcaccgact
gacaagaaagatcttgaacagaaaacgtatggtgagccatacaagcaggaggaaaatgca
gcaaatagtcctgtttcagatgtctcttttgcaggacaagacatgaatgaggacttagag
gtgctttgtgcacgaacagaagctcttcatgttcatggttatcgggaaatggctggcaaa
ctagctgtgaagctagcagagaacatcttgaacaatggaaataatttggtcccgttctct
cattctggaggaacacgaaacaagagaaggggccctggaaaaggatcctttgctcgtagc
atatttgttaaggcagcatttctatgcagtgtgctggaagatgatctgcatctccatcac
ttggccttccgagttggtatgatgggcttggagatgcctagacaaccagcaaggagtaaa
gctttagaagttaagctttgttatcaagagtcagaacttgccacattattgaagaggctt
cctcttggtccagctgaactagccgttattcgagagaaagctgagctcttgtttcatgga
aaactgaagcgtggagaggcggtacttcccatcatgctggcaacatttatcttcgatgtc
ttgtgtccttgcagcagtggttcaagcaagcgacaggtgacgggcaaactgtgtgagacc
aacaaggaagatgaagcattgggatttaaagctgcactctacgcgttaggaatgaaaggc
aacgctttggaaacgcagtacccaatgctgtgcgaaggaacaaggcgacagaggggagac
ttggcgcaagcgcttctctttcacaacaaagatgacaacggcaggattcgtgaaataatg
gacgtcctattggataaggatcgatatgacttgccgaatgctactagagagaggcagaac
aagaagaaagaggaaaagaacgattgccaggataataagagccagagcagtgagacgtcc
aatgatgatactgttagcaacagatctaatatagggttaccaactcgccaaggaaacaat
ggacaaagttcgtcaagtaccagcgacagtggaacagacaaaagtaaagacagaagcaaa
cctcgtgttttagtgagtagaattcaggctcccaagtcgtttataactgttcaatcagcg
tcgttggatgatgagagtggaacctcaagtggagtggatacggatcctttgcctacatcc
agggatcaggagaggctcatcaccgtagaggtagtggaagttgctcctacaaaaacgggt
gaaacggggaaaggggatatatcaaactcagatgaagcaaaaagtgtgtttctttcgtca
cctcaaggtgccgcgtcgtttgcggcagataatctgcagccaaatgtcccaggaacagaa
atcaggaatcgttcaagctcgttcctggtttcattgggtacggcctatgacaaggaagtc
gtttgctcatcacattacaaacaggaagattcttttcatcctaactttctcacaaatcca
aacgacgtcaatcccggactgtccttatacaatggcaatgagcgttgtgatgataaagaa
agtttagacttcgatcgtccagctggagacttatcttgcaatgctggcgctgtcccgtgc
gcaaatttatcgggtgaaggagtgtccgatcttgcggataatgatccaagaataaatgag
atgcctgtgagtggtttacctttgttgtactctaatgagatttatccacgggacgattta
tccagggaagaagtgagcgctgccatgagctctggtgcatcgttggatggtagcagtttg
gtcaacaagccaccgccctcctctatctcgtctggtaacaatagcttttcttgcaaaaga
gcggagattgaacgcggcaatccagcattcagtcaatatcactcatccgagggcgacgtt
tcagatatcgaagcagatattgaagaatcccacctgaaactatccaagcttcaggtattt
gaaagcccagctgcagcagggacatccagtgacagtagcccaacttcgtatccgtcaggc
ccaacggcttttttcgaaagcgagccttcggcgtcgggagagtcgtcctattccggcgct
aacctgggtcatgaatatgatggtgctgatgctgcttgtgtcatcgttccagcgttagaa
gaagtatcagaggaacagtcaagcgggtcaggagccagaggaagctcaaattcagtagag
agttgtagaggtcgacgtcgtagtagaatccgaaggcggagaaggcgaggcaaactcgct
ctttatcaagccaccgaagccgaagcacatttcatgtttgagctcgcaaagacagttctt
accaaagcaggaggtaacagcagtacttcagtgtttacacagacaacaaacactgacact
cagacaggtcctcatcggggtctgcagctctgtgcatttgagataggtctgtttgctttg
ggactgcataatggcacttcacgtaattggttgtcacgcacttactcatcgcacgtgtct
tggatttcgggccaagccatggaaattggccatcaagccatagctatcctgttagaccat
tgggagggtaacttgacgccctctgaggttgcctctatcgctgaccgtgcctcaaggtct
aatgaccgcactatggtaaacgcggcagctaaacttggattgtcgtgtcttcacatggct
accactcttaacccggtggaaattcaacgcgctttgtctcaatgcagagaagaagactcg
cagctgttggaccaggcttgtcaggcggtggaaagtgctgctctcggtggtggcgtctac
cctgaagtcctttttaatgtagccaagcactggttttacctccacgagaaagatcagttg
agcaactcgacctcgcgaccttcgaagaacgaagctagaaacagaggctcgctgagtcga
ccagctcaatcgacgacttcttcaagtcattctccgccattgagcccctttgcagcccag
atatctcaatttaccattcctcccagttattcgtcaatacctcctcctttgtatactaca
ccagcgcaatacgtacaccaaaagatgcatcatcaagtccatcaaatgatgggccattat
tcagcttacttaccacccaactgcacagggtatcgtgccggttcgcaaccctattattct
tacccgttctcaagaactttaccagattcacagttttcattatcaggagcctacactgga
ctcactccgccaccgtaccaagtttcaaatgtaacagcaaatcccagtcaacacatgaac
cgcttgttaactactcaacaaggaacacaaatatcatattatctaaacagcgcatacaga
gcaggaatgctggcgcttgaggttttatcgcggcgcgcttcggacgaccgcccagttgtg
aaattttctcgtaaccccagctatagtgaagatatcagatggctgtgcaccttgtcagcc
aaacttggcacctcgcatcttcaaggattttgtgtggcaacgttgaacgcggtcgtaagc
ccgtttgttcttcacgagctcgccttagaagctgcgaggcacatggctcggtccaacccg
tcacagcttgcagcaaatttgcgttctcctacgattagccctctggtccagaagagtttg
actatgtacgctcagtgcattcattataatctaattagcatctcccaaaatgaatatgac
gagtttgtggaattgcttaggcacgcgagaggtgccttttgtatggcgcctggtggcatg
acacagttcaatgaattactacagagtattcgacgaggacattccaagaagaaagacctg
tggcaaatgattatagctggactagcaaaggcatag
DBGET
integrated database retrieval system
