Acropora digitifera (stony coral): 107350379
Help
Entry
107350379 CDS
T04352
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107350379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107350379
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107350379
mRNA degradation factors
5'-3' decay
Decapping complex
107350379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
107350379
NCBI-ProteinID:
XP_015772086
LinkDB
All DBs
Position
Un
AA seq
1164 aa
AA seq
DB search
MDDSARGMASKILCDLLNISKTDSVSANSGSNNDDNKVSNGVERPEMEDVDESISETAST
TSSLSPIRRGKTEQSSDVSTSDSEGVASRMSLEPVKQVLQMTGIDNEGSKSVYGSDVEII
THDSASSISATASSKIKFNSMVNYDWELKYYRGCLIAVSSKCIAYALRGRLGYVVRLLDP
ETASRILIKGFVGMISELAFSHKDSNTLACVDEGGNVYVWVIQDENGKLEYSVKLHIQRS
TDSLCEHHRLVWTPYMPDVEENAESSADEGRPLAITHGNQVEVIDIDSLLESCGQSEVTV
EDIKQAEGYLEIKDGHTKPITEGALCPDGSVLATASEDGLIKFWQLSDKVECMHEFQPHG
GSQLSCMMFTDSQTSQNKDLPMWRFLITGADLNREIKIWCTVTWSCLQTIRYCPCSDYLF
NSSRVSDSTIRSSTSVTPQGCLHESGVRTPTSLPLPASPTITNASEPSTVAIPYFQSSPR
VVPAQNETEPEASLPDPLVPVTVTRTEAAPFSLMNENLRDRGSGSRGATPKIRSGSASPV
NRDADIEVSVDDDAKDEGAEELPESQKPEAETQGELNERDRKSSSGSSTSESLRPLSARA
TGNLINLDDNERGKGDDVQAGVQDVDELEEHWGMNVEDDLVATGRESPESAHALPVGTPA
TSSVHVGTRQLSALSSLVSTPVNTMDIAPQAAQGARMDGEVLASLGELLSLIKSQQQDIQ
ELRQQINLFQGAQKQNTTAVAREVQDVEERLAKRLENSLNDFSREESQRLDKALREKHSG
DKKRHEQLQNSLSQSLTNSLSGKLEKAVKAEVKSVVLPAVQKALSTVQEQLNTSLTQKLT
ATDTVMKDSIGKLVRSKGVVDAIGGAAATALQGPIQVTYREAFQRDILPSFERACQSMFQ
QINDSFDKGTQQYLHQVTAALDGRRGEEKESLVPVLQRLEAQTSSFQAITERMSSNILAD
FEVMLQKQLSSSLEGLREEIFSRLLSEVLTSVQDSVQKEMGLGLEGLRQQLREMITSSDQ
GPIQQASNPAKTQVVVTKLLESGRIGEAFQEALTASDLSIVVYVCESVDIDTVFSQTPCP
LSQPVLLSLIQQLSVDLTVDTELKHKYIEEALMALDVTNEVTKEHMPGVLEVLCQQLQSA
IQESSGARQRSLKMLQMAAKSLLR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcgcaagaggaatggcttccaaaatactttgtgacctacttaatatttca
aaaacggatagcgtctctgcaaactcaggctcgaataatgatgacaataaggtaagcaat
ggcgtagaacgacctgaaatggaagacgtagatgagtcaataagtgaaacagcttctaca
acaagttcactctcacctataagaaggggaaagactgaacaaagttctgatgtatcaacc
tctgatagtgaaggtgttgcatcaagaatgtcccttgaaccggtgaagcaagtgcttcag
atgacaggtatagataatgaaggcagcaaatctgtatatggcagtgatgttgaaattatc
actcatgactcagcatcatcaataagtgctacagcaagtagtaagatcaagtttaactca
atggtaaattatgactgggaactcaagtattacagaggatgtcttatcgctgttagcagc
aaatgcattgcttatgcactcagaggtcgtttaggttatgtggtgagactattagatcct
gagactgcctcaaggattctaatcaagggctttgtaggcatgatcagtgagttggcgttt
tcacacaaagattccaatacattggcatgtgttgacgaaggtggtaatgtttatgtttgg
gtcatccaagatgaaaatggaaaacttgaatactctgtaaaacttcacattcagcgttcg
actgattcactatgtgagcatcacagactggtatggactccttatatgccagatgttgaa
gaaaatgctgagtcctcagctgatgaaggtcgtcccttggccatcacacatggtaaccag
gtggaggtaatagatattgattcattgcttgaatcatgtgggcaatcagaggtcactgtt
gaagatataaaacaagcagagggatatttagaaatcaaagatggacacactaaaccaatc
acagaaggggctttatgtcccgatgggtcagtattagcaacagcaagtgaggatggtctt
atcaagttttggcagttgtctgacaaggttgagtgcatgcacgaatttcaacctcatggt
ggctctcagctgtcttgtatgatgtttaccgatagccaaacttcccagaataaagatctt
cccatgtggagatttttaatcactggagccgatctcaatagagaaataaaaatatggtgt
acagttacatggtcttgtcttcagacaataaggtattgtccttgctctgactacctattt
aattcatctcgcgtatccgatagcactatcaggtcaagtacttcagtgacacctcaaggt
tgcttacatgaaagtggtgttcgtacacccacgtcgttaccgcttcctgcctcaccaact
atcactaacgcttcagagcctagcaccgtagcaattccatatttccagtctagtcctcgt
gttgtacctgcgcagaatgagactgaacctgaagcgtcgctacccgatcctctggttcct
gttacagtgaccaggacagaagcggctccttttagtttaatgaatgaaaatttacgcgat
agagggagtggttcgaggggagccacaccaaagatcagaagtggatcagcaagccctgtc
aacagagatgcggatatcgaggtttcagtggatgacgatgcaaaggatgaaggagcggaa
gagttacccgaatctcagaaacccgaggctgaaacgcaaggagaattaaatgaaagagat
agaaaatccagctctggctccagcacaagtgaaagcttgaggccactctctgctcgtgcg
actggaaatctgatcaacttggatgataacgagagaggaaaaggtgacgatgtccaagca
ggcgttcaagatgtggacgaacttgaagagcactggggaatgaatgttgaggatgatttg
gtcgcaaccggacgggaaagtcctgagtcggcacacgcgcttcctgttggtacaccagca
acttccagtgttcatgttggaacaaggcagctctctgctctttcaagtttggtttccact
cctgtgaatacgatggacattgccccacaggcagcccaaggggctcgtatggacggtgag
gttttggcatctcttggagagttattgagtttaatcaagtcgcagcaacaagacatccag
gaacttcgccaacagatcaacttgtttcaaggcgcacagaaacagaacacaacagccgtg
gctcgtgaggttcaagatgttgaagaaagattggccaaaaggctagaaaacagtctgaat
gacttttccagagaggagtctcaacgtctagataaagcattacgcgaaaaacattcaggg
gataagaagcggcatgagcaactccagaacagcttatcacaaagcctaacaaattccctg
tcggggaaacttgaaaaagcagtgaaagctgaagtgaagagtgtcgtactaccagcagtg
cagaaagccttgagtactgtgcaggaacagctcaatacgagtctgacacagaaattaacg
gctacagatacagttatgaaggacagtattggtaaactggtgaggagcaagggtgtggtg
gatgcaataggaggtgcagcagcaactgcattgcaggggcccattcaggtgacttatcgt
gaagcatttcagcgtgacatattgccatcctttgagagagcttgtcagagtatgttccaa
cagatcaatgattcattcgataaaggaacgcagcaatatcttcatcaggtcactgctgca
ttggatggtcgtagaggagaagagaaagagtctttggttccagtattacagcggctcgag
gcacagacgagttcattccaagcaataactgagagaatgtcctcaaacattttggcagac
ttcgaagttatgttgcagaaacaattgtcatcttccttggaaggtttacgtgaagaaatc
ttctcacggctcttgtcagaggtgttgacatctgtccaggactctgtccaaaaagaaatg
ggattgggtttggagggtctacgtcaacagctccgtgaaatgataacctcttctgatcaa
ggtcccatccaacaagcttcgaatccggccaagacgcaggtggttgttacgaagcttctt
gaatctggacgaattggtgaagcgttccaggaggccttgactgcatcagacttgagtatc
gtggtgtatgtctgtgaaagtgtagacattgacacggtgttttctcagacgccttgtccg
ttatcacaacctgttttactttctctaattcaacaactgtcagtggatctcactgttgat
acagagctcaagcacaagtatattgaggaagcactgatggcattggacgtaaccaatgaa
gtaactaaggaacacatgccaggagtattggaggtgctgtgtcagcagcttcagtcagcc
attcaagaatcatctggggcgaggcaacgatccctcaagatgctacaaatggctgccaag
tctctcctaagatag
DBGET
integrated database retrieval system
