Acropora digitifera (stony coral): 107350402
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Entry
107350402 CDS
T04352
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107350402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adf03041
]
107350402
03009 Ribosome biogenesis [BR:
adf03009
]
107350402
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107350402
Spliceosome [BR:
adf03041
]
Complex A
U2 snRNP components
U2 related factors
107350402
Complex B
107350402
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107350402
Ribosome biogenesis [BR:
adf03009
]
Eukaryotic type
90S particles
Helicases
107350402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
nSTAND3
AAA_19
SRP54
AAA_22
DEAD
AAA_7
nSTAND_NTPase5
AAA_29
TrwB_AAD_bind
TsaE
ABC_tran
AAA_23
T2SSE
AAA_16
Motif
Other DBs
NCBI-GeneID:
107350402
NCBI-ProteinID:
XP_015772114
LinkDB
All DBs
Position
Un
AA seq
244 aa
AA seq
DB search
MSKRRLDVDGNSSGALSTAKRIKEELSNPSNMRGKINPFNGKLFTDKYFDILKKRIELPV
WEYREKFMESMKEHQAFVLVGETGSGKTTQIPQWCLETRVDKRKCVACTQPRRVAAMSVA
QRVADELDVMIGQEVGYTIRFEDCTSPRTILKLEIEEACKRLKKEIENLGSEVGELRCIP
LYSTLPPAQQQRIFDPPPPKRANGAIGRKCVVSTNIAETSLTIDGVVFVIDPGFSKQKVC
YFVL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaaggctggacgttgatggtaactcctctggagcgctgagtacggcgaag
aggattaaagaagagttgagtaatccaagcaacatgcgtggaaaaatcaatcctttcaac
ggcaaactcttcacagacaaatattttgatattctgaagaaaagaattgagttaccagtg
tgggaatatagggaaaagttcatggaaagtatgaaagagcaccaggcctttgttctggtt
ggtgaaacaggatctggaaaaactactcagattcctcagtggtgtttggaaacgcgcgtg
gacaagcgtaaatgtgtggcctgtacacagcccaggagggtagctgccatgagtgttgct
cagcgtgtggctgatgaattggatgtgatgattggtcaggaagttggctacaccatacga
tttgaagattgcaccagcccaagaacaattctcaagttagaaattgaggaagcttgtaaa
aggctaaagaaagaaatagaaaatttaggctcagaagttggagagttgcgttgcattcca
ctgtactctactcttcctcctgctcagcaacagcgcatttttgatcctccgccacccaag
agagccaatggagctatcggtcgcaaatgtgttgtgtcgactaacattgcagaaacatct
ctcactattgatggtgtcgtctttgttattgatcctggcttttccaaacaaaaggtgtgc
tacttcgtattgtga
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integrated database retrieval system
