Acropora digitifera (stony coral): 107350954
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Entry
107350954 CDS
T04352
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
adf04040
]
107350954
Ion channels [BR:
adf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107350954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Ank_KRIT1
DUF3459
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107350954
NCBI-ProteinID:
XP_015772702
LinkDB
All DBs
Position
Un
AA seq
1044 aa
AA seq
DB search
MPSWEIDGPGSNNSPFLGRQTTAASLLKVNLIRENYELTPTVNFAPLSARSQQAREIVQD
GTVRELNEFLSDNSNVKSLNTLDEEGASLLHFSARLNRVEVTRMLIEHNAHVDIRLRDGS
TPLHVAARFNSTAVAKVLLHSGANPLLLDSLENNALHHAVRRRNKDVVELLLQDSDIDVN
AKTQVGMTPLHLVCMNGDLDICGVLLGHGADIRAKTADNSTPLHTAVFSCNTQLAELLIK
EGQFWVFVVVFCTTLLFEWINVPHSFSEGRRRWNIIPKLKIFCKFPGISLHKGNRRISNQ
ISFSSRNIHCVDLFFLSFFRAASGNRVDVVKYLLDLGAQIDLRSDDNRTPFLMAVATGNV
DTARMLLESGTDVHACTKDMKNCLHLAVENGRLEMVELLLRNTEVKDNLYRSDILDRVPL
HNAAISPNVKILELLLAKYSRASFQDYNHQTPLHLAAQSGLVTHVEALGKDMSGLNERDD
HGMTPIHLAALQGNRKACQVLTTLGSDVNTRDSNRWTPLMWAARSGCEKTTQELLDKQAV
VDHVNNQGDSALHISASHGKVKVVELLLNYGADVRIRNNLGQTCLDVTVQSGAGDVALAI
ARNERWPEILEARSPNQDPPMKILIEHFPEAASLVMDQCIKRSSHIKTDPNYIEHYDFHL
LDPGPDDVTDVDGSNFFGPTTMVKFNRESLLLHPLTQKLLDIKWASFGRYIYCFNLSTYL
VFLITYTIFIVTEREAQDFNPIKKDTNGTSRKAAPSDIFTKSTEFNGGVLFIALIFAGAH
VVKEMFQLVVQKWRYFKDPSNITEWTLYLSTLCFMLPYLFTGEQLDLVFKDLKNPRNFWI
PGVISIFLCYINVILFMRRFQTLGIYVNMFLEVSRTVARVMLVFFIFIFAFSIVFYVLFK
EQESFRSMGWSFVKVSVMMVGEFEYDDTFINSINANDEKTGNPLNPFPEISAAFIFIFLF
MMSIILMNLLVGLAVGDIDSVRRNATLQRMAMQVAFVAEVEDKYPRMITSGWFFLHVKGI
FLKGKKNVRNLRLKAFHHRSHTTC
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatgggaaatcgatggaccaggatcaaacaattcgccttttctgggtcgacaa
acaacagctgcaagcctcttaaaggtaaacttaattcgcgaaaactatgagctgacacca
acagtcaactttgctcctctttcggcaagatcccagcaagctcgggaaattgttcaagat
ggaacggtgagagagttgaatgaattcctctcggataacagcaatgtcaagtcgcttaac
acccttgacgaagaaggggcctcgttgcttcacttttcggcaagactgaatcgagtcgaa
gtaacacgaatgctgattgaacataatgcccatgttgatatccgcttgcgagatgggtca
actccattacacgttgcagcaaggtttaactctaccgctgtagccaaagtcctgctgcat
tcgggcgccaatccactgcttctggactcactagaaaacaacgccctccaccacgctgtg
cgcaggcgcaataaagacgttgtggagctacttctgcaggactcagacattgacgtcaac
gccaagacacaagttggcatgacacctttgcacctcgtgtgcatgaatggcgatttggac
atctgtggcgtcttgttaggccatggcgctgatattagagcgaaaaccgcggataacagc
actcctttacacacggcagtgttcagttgtaacacacagctagcagagctgttgataaaa
gaaggtcagttttgggtattcgtggtcgtcttctgcacaacactgttattcgagtggatc
aatgttcctcactctttttcggagggcaggaggagatggaacatcattccaaaactgaaa
attttttgcaaatttccgggcatatctctccataaaggcaacagaagaatatccaaccaa
atttcgttttcttcaagaaatattcattgcgtcgaccttttttttttatccttctttaga
gctgcttcgggaaatcgtgttgatgttgtcaagtatcttctcgatttgggcgcgcaaata
gatttgaggagtgatgataataggacaccttttctgatggcagttgccacaggcaatgtt
gataccgcgcgcatgctcctggagtcaggaactgatgtgcacgcctgcaccaaagacatg
aagaattgtttacatctggcggttgaaaatggtcgcttggaaatggtagagcttctgctt
aggaatactgaggtcaaggacaatttgtaccgctcggatatactagacagagttccactg
cacaacgctgccatttcaccaaacgttaaaattctcgagttgttgctagcaaaatattct
cgtgcgtcctttcaagactacaatcatcagactccgcttcatcttgccgctcaaagcggc
ctggtcactcatgtggaggccttggggaaagacatgtcgggattgaatgaaagagatgat
cacggaatgacgcccattcaccttgcagcattacaaggaaacaggaaggcgtgtcaagtt
cttaccacactaggatcagacgtaaacacaagggatagcaaccgctggacacctttgatg
tgggcggcaaggtcaggatgtgaaaagaccacgcaggagctattggataagcaagccgta
gtcgatcacgtgaacaaccaaggagattcagcactgcacatctctgcttcacatggtaaa
gtcaaggttgttgaactgctgttaaactatggagctgacgttcgcataagaaataacctg
ggacagacgtgtttagatgtcacagtgcagtctggtgctggcgacgtggcgttagcgatt
gctcgcaacgaaagatggcctgaaattttagaagcccgaagtccaaaccaagacccacca
atgaaaatcttgatcgagcatttccctgaagcagcttctcttgtgatggaccaatgcatc
aagcgttcatcgcacatcaaaacagatcctaactacatcgagcattacgatttccatctt
cttgatcctggtcccgatgacgtaaccgacgtcgatggaagcaacttctttggtcccaca
actatggtgaagtttaaccgagagagtcttctcttgcatccgctgacgcagaagttgctg
gatataaaatgggcgtcttttggaaggtacatctactgtttcaacctttccacctatctg
gtgttcttaatcacgtacacaatctttattgtcactgaaagagaagctcaagattttaat
cccataaagaaggatacaaatggaacttcccgaaaggctgccccttccgacattttcacc
aagtcgacagaattcaacggaggtgttcttttcatagccttaattttcgctggagctcac
gttgtgaaggagatgtttcaactcgtggttcaaaagtggcgatactttaaggacccgtca
aacataactgaatggactctgtacctgtcaacgttatgttttatgttgccttatttgttt
actggtgagcagctggacctcgtctttaaagacttgaagaatccacgaaacttttggatc
cctggagttatttccatctttctttgttatatcaacgtgattctttttatgagacggttt
caaacgcttggaatttacgtgaacatgttcttggaggtcagcagaactgtggcaagggtc
atgctcgtcttcttcattttcatctttgctttctccatcgtgttctatgtcctcttcaag
gaacaggaatcattccggtccatgggttggtcctttgtgaaagtgtccgtcatgatggtt
ggagagttcgagtatgatgacacgtttatcaactctatcaacgcaaacgatgagaaaaca
ggcaatccactcaatccttttcctgaaatatcagctgcattcatctttatcttcctcttt
atgatgtcgattattctcatgaatcttttggttggtctggcagtaggtgatatcgattcc
gttcgaaggaatgccactcttcagagaatggcgatgcaagtggcgttcgtagctgaggtt
gaggacaaatacccaagaatgataacatcaggctggttcttcttacatgttaagggaata
ttcctcaaaggaaagaaaaatgtcagaaatcttaggcttaaagctttccatcacagatcc
cacacaacttgctga
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