Acropora digitifera (stony coral): 107350959
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Entry
107350959 CDS
T04352
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
adf04040
]
107350959
Ion channels [BR:
adf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107350959
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
107350959
NCBI-ProteinID:
XP_015772708
LinkDB
All DBs
Position
Un
AA seq
1197 aa
AA seq
DB search
MWKEGGRSDVDGASEEVTEKKNKRKTGCNPFKKSRNDADGKCDVPLVGIEPKSAKTTKAR
PSFGYTEETSEVAAPISPHALQLFEAIREDEMDLVEAELASLTDKRQIDKLGAHGLALIH
VAARYNFGRIVNSLLDHGASVNVGTRDYNWTPLHLAARFNGLSTIVDVLLPRGADPMSRG
DNGSLPLHLAARRGNEEIVKVLLDQPSVHVDVKDGSGKTALHLACSEGHKNVCQILLNFG
ASITEVAADKMTPLHCAIHNAHSEVARLILNRATDREVNTTMGELLREEDLQKNRVLHLA
AWNNDIKTAELCLDNGADVNAHNCNSGTALHLAATKGNLEVADLLIARGADLDLKDDKSK
TPLHKAALFNQTNIIEFLLDKEAKLDARDNDGRSPFLNAVAAGHVESARLLLNRGADISA
TDLLMKTCVHIAVENEHLNIVVMLLGKRAGVNNLNKGDMLDKVPLHYAATTDEIKILEVV
VSKQKRHIVNFQDEHHKTPLHLAAEKGSSKHVELLARHMSKLDARDDKGRTPLHSAARKG
QRKSCLALLNMGAEVDSRDNKQQTPLIWAAKNNQLKCVETLLDFKASPDLQDDRGDTALH
VASAHGYGAVASLLLDHGASLTLHNNQEWTCLETAAKAGSNDVALAISKHKRWTEVENYE
TSQGQTAISLLIENFPDAAEVVLNQCVRHSEHRSLSDPEYTVTYDFKHLDSDPDVRSPRG
RFSAVKAMIKHKRERLLLHPLTLKFNERKWVTLGRAVFILDFLAYLLLMIFFTIFIVGQR
QGQTFRPGFNQTKPPKPKPRSMNDMDDKPKPSDIYKRGSMFTEIVAPLILIFCLIHILKE
FTQIYVQRWKYFIDFTNYLDWTLYITSALFMVPFLTTPETLDEWFSSMRDPRSLWITGIL
AIFVCYTNMLLFLRRYRLFGTYIAMYVEVTKTVFQVMAVFVFLLLGFALVFHILFKEQTG
FHTVQHSSLRVLAMMIGEMDFGAIFIDTIGQDNQKTNNPENPFPKVAFFFFFVCLVLLTI
ALMNLLVGLAVGDTETMKRYATIQRLEKQLQYQIEVEEAYPTFITRRAYQAVYVEKPNVL
MLSLFHRILAWLQARFAAISPIEVEDSQSSEQSELKAEMMKNKKRIKSMMAMLEAQNKLL
RSLALTIDPKFHFPNDAEEDWRFDDVDADLSGSHAASVKTDSEKTSDFLRELVPIDS
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagaaggaggacgaagcgacgtagatggagcctcagaggaggtcacagagaag
aagaacaaacggaagactggctgtaatccattcaagaaaagtagaaatgatgcggatgga
aaatgcgacgttccgttggtcggaattgaaccgaaatcagccaagaccacgaaggcacga
ccttcctttggttacacagaagaaaccagcgaggtcgcagctccaatatcacctcacgct
cttcagctttttgaggcgatcagagaggatgaaatggatctagtcgaagcggagcttgct
tccctcacagataagcgccagatagacaaactaggagctcacggcttagcccttattcac
gtcgctgctcgatacaattttggcagaatcgtgaactctcttttagatcatggagcaagc
gttaacgttggaactcgcgactacaattggacgccgcttcatctagccgccaggtttaat
ggcctttctactatagtcgacgtgttgttaccccgcggggccgatccaatgagcagaggt
gacaatggaagcctgcctttgcaccttgcagcgcgcagaggaaatgaagaaatcgttaaa
gttcttttggatcagcccagtgtccacgtcgatgtcaaagatggctctggaaagacagcg
cttcacttggcctgcagtgaaggccacaaaaacgtttgtcaaattctactgaattttgga
gccagcatcacagaagttgccgctgacaaaatgacacctcttcattgtgccatacataac
gctcattcggaagtcgccagattaattttgaatcgagctaccgatagagaagttaacacc
accatgggagaactgttaagggaagaagatttacagaagaacagagtcttgcatttggcg
gcatggaataacgacataaaaactgctgaattgtgtctcgacaatggcgctgatgtcaac
gcccacaactgtaactcggggacagcacttcatttggcagctactaaaggcaacctcgaa
gttgcagatttgttgatagcaagaggagcagatttggacttgaaagacgataaatcaaaa
acgccgctacacaaggcggcgctgttcaaccagacgaacatcattgaattcctcttggac
aaggaggccaaactggatgcacgagacaatgatggtcgttctccattcttaaacgctgtt
gctgcgggtcatgtggagtcggctcgtcttctcctcaatcgtggagcagacatcagtgcc
acggaccttctgatgaaaacctgtgtacacatcgcggtggaaaacgagcatttgaacata
gttgtgatgcttttgggcaagcgcgctggtgtaaataatttgaacaagggagatatgctc
gacaaagtaccccttcactacgccgccacaacagacgaaataaagattctcgaggttgta
gtatccaaacaaaaacgccatattgttaatttccaagacgagcaccataagacacctctc
caccttgcagcggagaagggctcctccaagcatgttgaactactggcaagacacatgtct
aaattggatgcacgagacgataaaggaagaacacctttgcacagtgcagcaaggaaaggg
caaaggaaatcatgcttggcacttctgaatatgggagcagaagttgacagtagagacaac
aaacagcaaactccactcatctgggctgctaaaaataatcagctgaaatgtgtcgagact
ttgcttgacttcaaagcctctccagaccttcaagatgaccgtggagacactgccttgcat
gtggcatctgcgcatggttacggtgccgtggcttctttgctgttagaccatggtgcaagt
ttgacgcttcacaacaaccaagaatggacttgtcttgagacagcagccaaagcggggtca
aatgatgttgctctggcaatcagtaagcacaaaaggtggaccgaggtggaaaactacgaa
acatcacaaggccaaacagcgatctcactcctaattgaaaatttcccagatgcagccgaa
gtcgttctcaatcaatgcgtacgccatagcgaacaccggagcctcagcgacccggaatac
actgtcacttacgattttaagcatctggattctgatccagacgtgcggtcgcccagggga
agattctctgcagtcaaggccatgatcaaacacaagcgtgaacggctcctgctgcatcct
ctcacgcttaagttcaacgaacgcaagtgggtcacactaggtagagctgtcttcatactt
gattttctcgcctatcttctgttgatgatattctttacaatcttcattgtcggtcaaaga
cagggccaaacctttagacctggcttcaatcagacaaaaccacctaagcccaagcccagg
tcaatgaatgacatggatgacaagccaaaaccttcggatatttacaaacggggtagcatg
ttcacagaaatagtagcaccattgatcttgatattttgtctgatccacattctcaaagaa
tttactcaaatctacgtccagcgttggaaatatttcatagactttaccaattacctggac
tggacactttacatcacttcagcgttgttcatggtgccattccttacgaccccggaaact
ttggatgaatggttctcgagcatgagggatccacgatccttatggatcactggaatttta
gcgatattcgtgtgctatacgaatatgttgttgtttctgagaaggtaccgtttgtttggc
acttacattgcaatgtatgttgaggtgactaaaactgtttttcaagtgatggctgtcttc
gttttcttgctattgggatttgcattggtctttcacatcctcttcaaagaacagactgga
ttccacacagttcaacattcctcgttgcgtgtgttggctatgatgattggagagatggac
tttggggcaatatttatagatacaataggacaggacaatcaaaagacaaacaaccctgag
aatccattccctaaagtcgcgtttttcttcttcttcgtatgtttggttttgctcaccata
gctctgatgaacctgctggttggtttggctgtcggagatactgagacaatgaaaaggtat
gccactatccagagactggagaagcagcttcagtatcaaatcgaggttgaagaagcttat
cccacctttataaccagaagggcctaccaagcggtttatgttgaaaaacccaacgtattg
atgctatcactgttccacagaatacttgcctggctgcaagcaagatttgccgcgatcagc
ccgatagaagtggaagatagtcagtcgtcagaacaaagtgagttaaaagccgagatgatg
aagaacaaaaaaaggatcaaatcgatgatggccatgttggaagcccagaacaagctactc
cggtctctcgctcttacaatcgatcccaagtttcactttcccaatgatgcagaggaagat
tggagatttgatgacgtagatgctgatctgtcaggatcacacgcggcgtctgtgaaaact
gatagtgaaaagacatcagatttccttcgtgaactcgtgccaattgactcctaa
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