Acropora digitifera (stony coral): 107350960
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Entry
107350960 CDS
T04352
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
adf04040
]
107350960
Ion channels [BR:
adf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107350960
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Spc29
Motif
Other DBs
NCBI-GeneID:
107350960
NCBI-ProteinID:
XP_015772709
LinkDB
All DBs
Position
Un
AA seq
1188 aa
AA seq
DB search
MANQDNLGTYFISPFSKERNGNIQRSDGHGKSYLSVSRERMTVEMSELGQAYALPSRTNG
GLFEAVRDGSVDLVNDRLGNKKQSAKEINKLDQSGLSLLHQAARYNRRKVAETLLDHDAC
IDVRTKEEKLTPLQIAARFKCVETLKLLIKRGADPSLKSSNGSTALHFAARRGNDQIAEL
LLGHAKVDVNAKDLSLMSPLHLACISGSADIVKMLLDKGADLRAKTNELMTPLHVSLFYG
NTDVTALILRTVSQVGENVKELIGEGDSHRNTILHLAAGTNDPRTAEVCLQNGADIDARN
SDNETPLHVATVKGNLQMVQLLVKKGACVSAKNAEHKTILHRAAVFNRDDIISFLLDNGV
PVDTPDAHHITPFLDAVAAGQTKCAQLLLRRGADFKACDINMKNCVHMAIENEHLETLTM
LLEEKFLERNLYSPDVYERVPLHYASMVKDVRIMDTLLSKHTKFTFHDETQQTPLHLAAQ
YGMFAHVEALARRVASGLNERDDQGRTALHNAVINGHRKVCFTLLKLGADAGCTDNDGWT
PLMWASKLGFEKSCQELLVKASCLDSVNMEGDTALHIACRHGRVNIVRLLLDNGASLTLC
NTQSLTCLECAVQVGNGDVAMTMVKHSRWREIMEHKDKYGHSPMKLLIEHFPESAELLMD
RCVKRCEMTGSNDPNFSITYDFHLLDPGPDDPAFALGRRFFAPSVMVKSQRKKLLMHPLT
QVLLTQKWSTFGRFIYYFNFLSYLIFVMSYSAFIVTERQKLNFTGNYRYQQETNSWECYE
DAYNYSSEDDYFNCYPVSSIYAGQTHYSANISYIVFVFAVIHLLKEILQIIIQGFRYFTE
ISNLLEWLLYGTAFTFLIPYVMPDSITNNMFRRMSDPYFLWLVGVTSIFCCYGNLVLFLR
RFRLFGIYVTMFVEVTKTVIKVLLVFLVLIIGFTIVFFVLFKEQHAFTNPGRAFVKVMVM
MIGEIEFDDTFIQTIGKKSDTSGAPLNLFPSVSFVFLAFFLLLMSIILMNLLVGLAVGDI
DSVQHNASLKKLAMQVEFVAEIEQSYPRFLTRRLYRPSLVFRPNRPSRWKRFKAKLGIRH
SSKLDFGLPVEEGDSNLDDYNHVKKQLDKTKKRIKTLVNVIDAQNTLLRRLARKIDPGGE
MDSHSLEEVRPIIEEGQDVVISDFLDGQLPQETEKNTASRTGDEITVC
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcaagacaatctaggaacgtattttatctctccttttagcaaagaacgcaac
ggaaacatccaacgcagcgatggtcatggcaagagctatctcagcgtttcgagagaaagg
atgacggtggagatgagtgaactcggacaggcatatgcattgccatcgcgtacgaacggt
ggcttgttcgaagccgtgcgagatggcagcgttgatcttgtgaatgaccgactcggcaac
aaaaagcaaagtgcaaaggaaatcaacaaattggatcaatctggcctctcccttcttcat
caggcggcaagatataaccggaggaaagtggcagagaccttgctagaccatgacgcttgc
attgacgtccgaacgaaagaggagaaattaacaccactacaaattgctgcgagattcaaa
tgcgtggaaacgttgaagttactgatcaaacgaggagcggatccttccttgaaatcctcc
aatggcagcacagccttgcactttgccgctcgccgcggaaatgatcaaatagcggagctt
ctccttggtcatgcaaaggtcgatgtgaatgccaaggacctttcgctcatgtctcctctt
caccttgcttgtatcagtggtagcgcagacattgtaaagatgttgcttgacaaaggagcc
gatttacgagcaaagacaaatgaactgatgactccccttcacgtttctcttttctacggg
aacactgacgttactgctttgattttgcgaacagttagccaggtgggcgagaatgtaaag
gagctcattggggaaggggattcacatagaaacacaatccttcacctcgcagctggaacc
aacgatcctaggactgccgaggtgtgcctgcagaacggtgctgacatcgatgcacgcaat
tccgacaacgaaacgcctctacacgttgcaacggtgaaaggaaatttacaaatggttcag
ctattggtcaagaaaggggcatgtgttagtgccaagaacgcagaacacaaaaccattctc
cacagggcagctgtctttaatcgcgatgatatcatctcctttctgcttgacaatggtgta
cccgttgacactccggatgcccatcacatcacgccctttttagacgctgtagccgctggt
cagacaaaatgcgctcaactcctcctacgaagaggagccgacttcaaagcatgtgacatt
aacatgaagaactgcgttcacatggcgatcgagaacgaacacttggagactctgacaatg
ctgttggaggaaaaatttcttgaaagaaatctgtacagtcctgatgtttacgagcgagtt
ccacttcattatgcctccatggtcaaagatgtcaggataatggatacactcttgagtaaa
cacacaaagttcactttccatgatgaaacacagcagactccactgcatctcgccgcccaa
tatggaatgttcgcacacgtggaggctttggcgcggagagtagcttccggattgaatgaa
agagatgaccaagggagaaccgcacttcacaatgccgttatcaatgggcatcggaaagtt
tgcttcactttattgaaactcggcgctgacgcaggttgcactgataatgacggatggaca
ccgttaatgtgggcatccaaactcggttttgaaaagtcatgccaagaacttttggtaaaa
gcgtcctgcttggatagtgtgaacatggagggcgacaccgccttgcatattgcatgtcga
cacggtcgcgtgaatatcgttagattgctactggacaacggtgcaagtttaactctgtgc
aatacacagagtctcacgtgtttggaatgtgcagtccaggtgggcaatggagatgtagcc
atgaccatggtgaaacattcaagatggcgtgagatcatggaacacaaagacaagtacgga
cactcgcccatgaagttactcatagagcactttccagaaagcgcagagctcttgatggat
cgatgtgttaagcgctgtgagatgactggatccaatgatcctaacttctccattacctat
gacttccatcttcttgatccaggccccgatgatcccgccttcgcccttggacgacggttc
tttgcacctagtgttatggtaaaaagtcagcgaaagaaactcttaatgcatccacttacc
caggtcctgttgacacaaaagtggtcgacgtttggacggtttatttactacttcaacttt
ctgtcttatttgatttttgtcatgtcttattccgctttcattgtcactgagagacagaaa
cttaacttcacaggcaactaccgttaccaacaagaaaccaactcttgggagtgttacgaa
gatgcttacaactatagcagtgaagatgattattttaactgctaccctgtatcctctata
tacgcagggcaaacccattacagcgctaatatttcatacatagtgtttgtgtttgcagtt
atccatctgttaaaggagattctgcaaattataatccaaggatttcgttacttcacggag
atcagcaacttgttagagtggctgctctatggaacagcgttcacctttttgattccgtac
gttatgccggatagcattaccaataacatgtttcggaggatgagtgacccatactttctg
tggttagttggtgtgacgtcaattttttgctgctatgggaacttggttctgtttctccgt
cggtttcgtctgtttggaatttatgtcaccatgtttgtcgaagtcaccaaaacagtaatc
aaagtgctgctcgttttcttggtcttgatcattggttttacaattgtcttcttcgttctc
ttcaaagagcagcatgcctttactaaccctggtcgagctttcgtcaaagttatggtgatg
atgattggtgagattgaattcgatgacacgtttatccaaaccattggaaaaaagagtgac
acctctggggcgccgctgaacctattccctagcgtatcttttgtcttcctggcgtttttc
ctgcttctcatgtcaataatactaatgaaccttttggtcggcctagctgttggagatatt
gactctgtccagcataatgcatctttaaagaagctagctatgcaagtggagtttgttgcc
gagatcgagcaaagttatccacgatttctgacgaggagattgtatcgaccaagcttagtg
ttcagacccaatcgtccaagcagatggaagaggttcaaggctaagcttggaattaggcac
tcgtccaaactcgacttcggccttccagtcgaagagggagattccaatttagatgattac
aaccatgttaaaaagcaactcgacaaaactaaaaagcgcataaaaacgctggtgaatgtc
atagacgctcaaaacaccttgttaagacgattggccagaaagatcgaccctggaggcgaa
atggactcacatagccttgaagaagtcaggccgattatagaagagggccaagacgttgtg
atctcggatttcctggatgggcaattaccgcaagaaactgagaaaaacactgcgtctcgc
acaggagatgaaataacagtttgctag
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