Acropora digitifera (stony coral): 107350965
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Entry
107350965 CDS
T04352
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
adf04040
]
107350965
Ion channels [BR:
adf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107350965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ion_trans
Ank_KRIT1
Asp_protease_2
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
107350965
NCBI-ProteinID:
XP_015772716
LinkDB
All DBs
Position
Un
AA seq
1009 aa
AA seq
DB search
MRKVRGRQGDGMSEDDRAEGKVKRRYNPFRHRTDEKDVPLVKIEPQGRKAKSPGSSFGCS
EESSEVNGTMSPYSLKLFEAIREDEIDLVNEGLASLTDKSQINRLSGHGLALIHVAARYN
FGRIVNILLDQGADINVGTRECEWTPLHLASRFNCLSTVAEVLLPRGADPNLKGKNGSIP
LHLAARKGNEEIVKILLDQPAVHVDATDGSGKTALHLACSGGHEKVCRILLNYGADIKAV
SEDKMTPLLCAIQSRHTEIARMILSRANDPDVETNKEELLQDEDLHSNTAIHSAVWNMND
VKTVELCVDCGADVNALKSDSVTALHLAAAKGNVEVVDFLISKGASVQVKDENSKTPLHM
AALFNQTKVIEFLLGKEAKLDARDSEGRSPFLNAVAAGHLESAQVLLDSGADVSATDLQM
KTCLHIAVENEHLSILVMLLDRHSAVSNLSKGDIFDRVPLHYAATTKDIEILELVLAKQK
RHGVFLQDEHHKTPLHLAAEMGSSKHVEVLAKNTRNINSRDEKGRTALHSAARKGQRKSC
LTLLTTGADANSRDNNHRTPLMLAAHNNKLKCVEVLLNFKASPDPQDAHGNSALLLACAQ
GHGAIVNLLMDHGASLTLNNKQEFDCLELAAKAGSSEVAMAIVNNKRWTELEDYQTSNGQ
TAISLLIENFPEAAEVVLNRCVHHSEHLNPSDPEYAVTYNFKFLDQDPDVAAPEGRFSAV
KTMIKNQRERLLLHPLTLKLNECKWIALGRAVFMSDFITYLLLMIFFTIFIVDERSTQSF
RPTNSTDGVEPSDIYNHETVFSRIVPPVILLFSLIHIGKEFLQIYVQRWSYFKDSSNYLD
WILYGSTLVFMVPYVVPPEQLNESMQDMTDPYTLWIAGILAIFICYTNMMLFLRRYRLFG
TYISMYVEVTQTVAQVMGVFVFLVLGFALVFHILFREQVGFHTVHHSILRVLVMMIGELD
YGAIFIDSIREKNPENQNPLNPFPSVAFSFLYLCLFFLSVALMNLLVGK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagttcgtggaagacaaggagatggaatgtcggaagacgatcgagcggagggt
aaggtgaagcgacgatacaatcccttccgacatagaacagacgagaaagatgttcctttg
gtcaaaatcgagccacagggtagaaaagctaaatcgcctgggtcatcgtttggttgctca
gaggaaagcagtgaggttaacggtactatgtctccttattctctgaagctttttgaggcc
attagagaagatgaaattgatctagtgaacgaagggctcgcgtctttaacagacaaaagc
caaatcaatcgattaagtggccacggacttgctctgattcacgttgcggcgcgctacaat
tttggaaggattgttaatattctactagaccagggagcagacatcaatgttggaacgcgg
gaatgtgaatggacgcctcttcatctcgcctcgaggtttaactgtctctccactgtcgca
gaagttctcttaccccgtggagctgatccaaacctcaaaggtaaaaacggaagcattccc
ttacaccttgcggctcgcaaaggaaatgaagagattgtcaaaatacttttagatcaacct
gcagttcatgtcgacgctacagatggttccggaaaaacagcgcttcacctagcttgcagc
ggaggtcacgagaaagtttgccggatacttttaaactacggagcagacatcaaagcagtt
tcagaagacaagatgactccgcttctttgtgcgattcaaagtaggcacaccgaaatagcg
agaatgattttgagtcgagccaatgacccagacgttgaaacaaacaaagaagaactctta
caggacgaagacttgcacagtaatacagcaattcattcagctgtgtggaatatgaacgat
gtgaagacagtagaactttgtgttgactgtggtgctgatgtgaacgccctgaaatccgac
tccgtcacagcacttcatttagcggctgctaagggaaacgtcgaggtagtagattttctg
atttcaaaaggagcaagtgtgcaagtgaaagacgaaaattccaaaacaccccttcatatg
gcagccctatttaaccagaccaaagttattgaattcctcttgggtaaggaagccaaacta
gatgcaagagacagtgaaggtcgttctccatttttgaacgctgtcgctgctggtcacttg
gagtcggctcaggttctcctcgacagtggagcagacgtcagtgccaccgaccttcaaatg
aaaacctgtctccacatcgctgtagaaaacgaacatttgagtatccttgttatgcttttg
gacaggcactccgctgtaagcaatttaagcaaaggagatatatttgatagagttccccta
cattatgcagcgacaacgaaggatattgagattttagagttagtcttagccaaacaaaaa
cgccatggcgtctttctccaagatgagcatcacaaaacacccctacacctggcagcagaa
atgggatcatccaagcatgttgaagtactggcaaaaaacacaagaaatatcaactcgcga
gatgaaaaaggaagaacagctttgcacagtgcggcaaggaaagggcagagaaaatcttgt
ctcacccttctcaccactggagcagatgccaacagtagagacaacaatcaccgcacaccc
ttgatgttggcagctcacaataacaagttgaaatgtgtggaggttctgctgaacttcaag
gcctctcctgaccctcaagatgcccacggcaactctgccttactcttagcttgtgctcaa
ggacatggagccattgtcaacttgctgatggaccatggtgcaagtttgacactcaacaac
aagcaagagtttgattgcttggaactagcagccaaagcaggatcttctgaagtggccatg
gcaatcgtcaataacaaaaggtggacagaacttgaagactatcaaacatcaaacggtcaa
accgcgatctcactgttgatagaaaacttcccagaggcagctgaagttgttctgaatcga
tgtgtgcaccattcggaacacctaaacccaagtgatccagaatacgctgtcacttacaac
tttaaatttttggatcaggatcccgacgtggctgctcccgagggacgattttcagcggtt
aagacgatgatcaaaaatcagcgcgaacgtcttcttcttcatccactcacgttaaagctc
aacgaatgcaagtggatcgcactgggaagggctgttttcatgagcgactttattacgtat
ctattgttgatgattttcttcacaatcttcatagtcgatgagagaagcacccaaagcttc
cgtccgaccaatagcactgacggtgtggaaccctcggatatttacaatcacgaaacagtc
ttctcacgaattgttccaccagtgatcttgttattttctttaattcacataggaaaagag
tttttgcagatctacgtccagcgctggagttattttaaggactcttcaaattatctggac
tggattctttacggcagcactctggtgttcatggttccatacgtcgtgccacctgaacag
ctgaatgaatcgatgcaagacatgacggacccatacacgttatggatcgctggaatttta
gcaatctttatttgttacaccaacatgatgctatttctcagaagatatcgtcttttcggc
acctacatttcaatgtacgttgaagtgactcaaaccgtagctcaagtgatgggcgtcttt
gtattcttggtcttaggatttgcattggtctttcacatcctctttagagaacaggttgga
ttccatactgtgcaccattccattttgcgtgtgttggtaatgatgattggagagctggac
tatggcgcgatcttcatcgattcaataagagaaaaaaatccagaaaatcagaaccccttg
aacccatttccctcagtggcattttcattcctctacctttgtttgtttttcttgtcagtg
gcgttgatgaatttattggtagggaaatag
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