Acropora digitifera (stony coral): 107351410
Help
Entry
107351410 CDS
T04352
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107351410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adf03400
]
107351410
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107351410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
IL34
DUF6762
LON_substr_bdg
Motif
Other DBs
NCBI-GeneID:
107351410
NCBI-ProteinID:
XP_015773181
LinkDB
All DBs
Position
Un
AA seq
1172 aa
AA seq
DB search
MAVQPCQQFSLDGAAEQGFLAFYRSLPEKPETTFRVFDRSDYYTVHGPDALFAAKEVFKT
TSVVKHLGSGDKKVPSVILSKMNFESTVRDLLLIRQYRVEMYRASSKGSKNTSAWELVAK
ASPGNLQQFEDILFGNNDMSVSTVVMSIKLGTDNGQRVCCALLVQLGPKECLLPQHDTSP
DSTKVLEVIQRSNALVTDRKKAEFSNKDIVQDLNRLLKMGASGNSATLPEMDLTQATAAL
AALIKYLELLSDETNFGQFHLSTFDLSQFMKLDSAAVRALNLLPNPLDGGNKSMCLVGLL
NKCKTAQGQRLLAQWVKQPLMDKSKIEERLDIVEVFFEDTELRQTIQEELRKVPDFSRLA
KKFQRHKATLQDCVRVYQALHRLPTFNGVLAAYQGNHHELIRDCFTSPLQDLVQDFEKFT
ELVETTVDLDQVENHEYLIKASFDEGLQECREKMDEILEQIPIQLNKAARDMALEAGKSI
KLESNNQYGYFFRITKKEEKALRGNKHYTTIDTRKDGIRFNNSALRQLNEQFQALKETYN
EVQSKLANEVIKVAGGYSEPMQMLSDIIANISEMDLTQATAALAALIKYLEVTFENLLLF
MLLSDETNFGQFHLSTFDLSQFMKLDSAAVRALNLLPNPLDGGNKSMCLVGLLNKCKTAQ
EERLDIVEVFFEDTELRQTIQEELRKVPDFSRLAKKFQRQKATLQDCVRVYQALHRLPTF
NGVLAAYQGNHHELIRDCFTSPLQDLVQDFEKFTELVETTVDLDQVENHEYLIKASFDEG
LQECREKMDEILEQIPIELNKAARDMALEAGKSIKLESNNQYGYFFRITKKEEKALRGNK
HYTIIDTRKDGIRFNNSALRQLNEQFQALKETYNEVQSKLASEVIKVAGGYSEPMQMLSD
IIANIDALIRVTKCTPQGVTGVIVLMAQLGCFVPCSSAEIAITDSILARVGSGDSQLKGV
STFMSEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISQNIATKIHCFCLFAT
HFHELTSLSDEVPTVTNLHVTAMTSSGTLTLLYKVKPGVCDQSFGIHVAELAHFPKRVIE
FAKQKAAELEDFQGNTAALGEGIVDPDTGTSPAKRRRLIKQDGEEIIKDFLTQVAKLSVE
TMTEEQIAHEMSILKDKMLARKDPYIQELLGN
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccagccctgtcaacagttttctttagatggtgcagcagaacaaggtttcctg
gctttttatcgatctttacccgagaaaccagagaccacttttcgtgtttttgatcgctcg
gactattacactgtccatggaccagatgcattgtttgctgctaaagaggtttttaagacg
acaagtgttgtgaaacatcttggttcaggagacaagaaagtgccatctgttattttgagc
aaaatgaactttgagagtacagtaagggacctgttgttgatacgtcagtacagagtagag
atgtaccgggcttctagtaaaggatcaaagaatacatcagcctgggaactcgtagcaaag
gcttcaccaggaaatctacagcaatttgaagacattctctttggtaacaatgatatgtca
gtgtcaacagttgtcatgtcaattaaacttggcacagacaatggtcaaagggtatgttgt
gccctgttggtccaacttggcccaaaggaatgtcttcttccccaacatgataccagccct
gattcaaccaaagtactcgaagtgattcaaagaagtaatgcccttgttactgataggaaa
aaagctgagttttccaacaaagacattgttcaagatctcaacagacttttgaagatgggt
gcctctggaaacagtgcaacacttcctgaaatggacctgacacaagccactgctgcatta
gcagctttgatcaaatacttagagttgctttcagatgaaacaaactttggccagtttcac
ctgagtacatttgacctatcacagtttatgaagcttgattcagctgccgtgagggctctt
aatcttcttccaaaccctttggatggggggaacaaaagtatgtgtcttgtgggccttttg
aacaagtgcaagacagctcaaggtcagagattgctcgcccagtgggtgaaacaaccactg
atggacaaaagcaaaattgaggaaagacttgacattgtggaagtgttttttgaagatacg
gagcttagacaaaccattcaggaagaactgcgaaaagtccccgatttttccagattggcc
aagaagttccaacgtcacaaggcaactttgcaggattgtgtgagagtataccaagccctt
cacagacttcccacttttaatggtgtccttgcagcttatcaaggcaatcaccatgaacta
atacgggattgtttcacatcaccacttcaggatcttgtccaggattttgaaaagtttaca
gagttagtggaaacaacagtggacctcgatcaagtggaaaaccatgagtacttgatcaag
gcctcttttgatgaagggctgcaagaatgcagagaaaagatggatgagattttggagcag
atacccattcaactaaacaaggctgcacgagacatggctctggaagcaggaaaatcaatc
aagctggagtccaacaaccaatacggatatttttttcgaataacaaaaaaagaagaaaaa
gctcttagaggcaacaaacactacaccacaatagatactcggaaggatggaataagattc
aataattctgcactacgtcaattgaatgaacaattccaagctctcaaagaaacttacaat
gaagtgcaaagcaaactagccaatgaagttatcaaggtggctggtggctacagtgaacca
atgcaaatgttgagtgacatcattgcaaacatttctgaaatggacctgacacaagccact
gctgcattagcagctttgatcaaatacttagaggttacttttgaaaatttattgttattc
atgttgctttcagatgaaacaaactttggccagtttcacctgagtacatttgacctatca
cagtttatgaagcttgattcagctgccgtgagggctcttaatcttcttccaaaccctttg
gatggagggaacaaaagtatgtgtcttgtgggccttttgaacaagtgcaagacagctcaa
gaggaaagacttgacattgtggaagtgttttttgaagatacggagcttagacaaaccatt
caggaagaactgcgaaaagtcccagatttttccagattggccaagaagttccaacgtcaa
aaagcaactttgcaggattgtgtgagagtgtaccaagcccttcacagacttcccactttt
aatggtgtccttgcagcttatcaaggcaatcaccatgaactaatacgggattgtttcaca
tcaccccttcaggatcttgtccaggactttgaaaagtttacagagttagtggaaacaaca
gtggacctcgatcaagtggaaaaccacgagtacttgatcaaggcctcttttgatgaaggg
ctgcaagaatgcagagaaaagatggatgagattttggaacagatacccattgaactaaac
aaggctgcacgagacatggctctggaagcaggaaaatcaatcaagctggagtccaacaat
caatatggctatttttttcgcataacaaaaaaagaagaaaaagctctcagaggcaacaaa
cactacaccataatagacactcggaaggatggaataagattcaataattctgcactaagg
caattgaatgaacaattccaagctctcaaagaaacttacaatgaagtgcaaagcaaacta
gccagtgaagttatcaaggtggctggtggctacagtgaaccaatgcaaatgttgagtgac
attattgcaaacatcgatgccttaatcagagtcacgaagtgtactcctcaaggagtcaca
ggagtgatagtccttatggcccagcttggttgctttgtaccatgcagttcagctgagatc
gccatcaccgattctattttggcccgtgtgggatctggggatagccaattgaagggagtc
tctactttcatgtccgaaatgctggaaactgcatcaattttgaggtctgctacagagaat
tcacttatcattattgatgaactgggaagaggcacttctacgtatgacggttttggactc
gcttgggccatatcgcaaaacattgccacaaagatccattgtttctgcttatttgctact
catttccatgagcttacctccctttctgatgaagtgcccactgtcacaaacctacatgtg
acagctatgacttcaagtggaactctaactttgctgtataaggtgaaacctggtgtttgt
gatcaaagcttcgggattcatgtcgcagaactggcgcactttccaaaacgtgtcattgaa
tttgccaaacaaaaggcagctgaactagaagatttccagggaaacactgcagcattaggt
gaaggaattgtagatcctgacactggaacatcacccgctaaaagacgacgcttaatcaaa
caggatggagaagaaatcataaaagattttctcacccaagttgcaaagctgtcagtggaa
acaatgacagaggaacaaatcgcccatgaaatgtcgattttaaaggacaagatgcttgca
agaaaagatccctacatacaagaactgttgggcaattga
DBGET
integrated database retrieval system
