Acropora digitifera (stony coral): 107351516
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Entry
107351516 CDS
T04352
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107351516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107351516
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107351516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
ARM_TT21
TPR_8
TPR_10
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
107351516
NCBI-ProteinID:
XP_015773302
LinkDB
All DBs
Position
Un
AA seq
622 aa
AA seq
DB search
MADNPVDTSDGPAEAIPRVGVTDAQRELASNAHIEFESKHYDRCLLSLNKLSELRKSDKK
VQHNRIVAQFYMVNCTESDESAKNFMKIRKQIEKESGETGDDLDDIDMAHLLYNESVIYF
HVSLYIYYSTIETLGYKICFLLIEIYLTLYKADKAHNVLTILENLVFGSSKQVESQVIQG
GLQAQLGPGNYKARLNILLKSMKACKREIKTFMNTSNMTAESLFLKSNFEYQRQNLRKSI
KLLNSAPKPSYRGQSLSTMYYNNLGCIHFQLHKYNLAAFYFRRALQENDKALASLPPVDK
NAPVSSRSLVTLGVNRRHEILYNLGIQLLFCGRPGVAFDCLVEAVQVYHTNPRLWLRLAE
CCIVSFQLSDDFRQKCIKKSDVIQDVVGSGPHRKIVLSPQTDKQYSSEESKGQSSAMPAC
TLAFASLCLQNALMLLKSAEVSTVHESESALLENQVARENDSVNQEMDASSDNGGLSRSS
NIQSEASIPAPPGPPVKLREVAHLSQLQEKNMECLFYYIVCEKMYFPQSLSEARASFLVN
LAGVYSLRSEFDKARKCLQQACAQGYSKEMSSRMVLLAVYIELQSGNVAGALQTIKKHQV
LSMTKVLGKTIKKTRGADIWKT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatccagttgatactagtgatggacctgcagaagccattcctagagttggt
gttactgatgcccaacgtgaacttgctagcaatgcccatattgaatttgaaagtaaacat
tatgataggtgtttgttatctctgaacaaactctcagaactgaggaagagtgataaaaaa
gtgcaacataacaggatagttgcacaattctacatggtaaactgcactgaaagtgatgaa
tctgcgaagaattttatgaagataagaaaacagatcgagaaagagagtggtgaaactggt
gatgatttggatgacattgacatggctcatcttttgtacaatgaatctgtcatctacttt
catgtgagtttatatatttattattccactattgagactctaggatataagatctgtttc
ctgcttattgaaatttatttgactctttacaaggcagacaaggcacacaatgttttgaca
atactggaaaacttggtgtttggatcaagtaaacaagtagagtcacaggtaatccaaggt
ggactgcaagcccagcttggaccaggaaactataaagcacgcctgaacatccttttgaag
tcaatgaaagcctgtaagcgtgagatcaaaacattcatgaacacaagcaacatgacagct
gaaagtcttttcctgaaaagcaactttgaatatcaacggcagaaccttcggaaatccatc
aagttgttaaacagtgcaccaaaaccaagttaccgagggcagtccttgagcaccatgtac
tacaacaacttgggatgcattcacttccaattacacaaatacaacttagcagcattttac
ttcagacgggctttgcaagaaaatgataaggctcttgcttcactgccacctgttgataaa
aatgctccagtatccagccgctctctggtcacactcggtgttaaccgccgccatgagata
ctgtataatctagggatccagctgctgttctgtggtcgacctggggtagcatttgattgc
cttgttgaagctgttcaagtgtaccacacaaatcctcgcctgtggctcagactagcagag
tgctgtattgtatcatttcaactgtctgatgattttcggcaaaaatgcatcaagaagagt
gatgtcattcaggatgttgttggttcaggaccacatcgcaaaattgttctttcacctcaa
acagataagcagtatagctcagaagagagtaaaggtcaatcatctgcaatgccagcttgc
actcttgcatttgcatcactgtgtcttcaaaatgctctgatgctgttaaagagcgcagag
gtttctacagttcatgaatcagagagtgccctactggaaaatcaagtggccagggaaaat
gactctgtcaatcaagagatggatgcctccagtgacaatggtggtctcagcagatcttca
aacatacaaagtgaggcaagtattcctgcccctcctggaccaccagttaaactgcgcgag
gttgcacacctcagccaactacaagaaaagaacatggaatgtcttttttactatatagtg
tgcgagaagatgtactttccacaatctttaagtgaagcaagggcgtcgtttctggtcaat
ttagcaggagtgtacagcttacgcagtgaatttgacaaagcgcgcaagtgtttacagcag
gcctgtgcacaaggttattccaaagaaatgtcttcacgaatggtgttactggccgtctac
atagagctacagagtgggaacgttgcaggtgcacttcagaccatcaagaagcatcaagtt
ctttcaatgaccaaggtactgggcaaaaccataaagaagactcgcggagcagacatttgg
aaaacataa
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