Acropora digitifera (stony coral): 107351544
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Entry
107351544 CDS
T04352
Name
(RefSeq) focadhesin-like
KO
K27498
focadhesin
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107351544
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107351544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
107351544
NCBI-ProteinID:
XP_015773334
LinkDB
All DBs
Position
Un
AA seq
1678 aa
AA seq
DB search
MKNTTTNLPLTRSNTGSTLSRWRTSSVKDCYFQIIYNNRRYLTFLWPIQLLFQVGWRLYE
NIVKKMTPGSILNGKSVEIPELMLLWEMIEESSEAVNRLCCRCLVLLVFNGHAELGYVLS
GLLNALPSARNLSGITDAVSSLMTFQVQQCAQSNTEYKCMFSLRSPPHPFITVLTNCPDY
AGNLIQHVSSMLLKSCHEPKAIFQMLEPFFKFVLQDPQPTVSAHVRQELHSTLLQTASSL
LMSCLGINEGINERISQRKQLAGLIVRFLLSVVPSYQIDGRRMTQTTFLVHSLANWHLEH
QEHINSHCVITDFKLIVNHLLSLCWESLSHGIDMTMSLLLLQAIQKSCPQAFSQLCVLPT
LSSLLLASSPFYHAHILPLCLSIMASQTPGSSPLMAVNHVFLVLPILQIIAFPRQSFSVW
APTSVDQSVECLAIQILSHLEMEIPLLMKYSSHQEQSMVCFNIFRHWFSVINPRPSQHGV
DLLSLLSKLLDQNLKPGEAGNDPSVVVVSLALKALQELCSAEVVDLCTAWKVLSVKLRLD
RRPAVLCNLCQLFSIVPNLVTESQDYQNFKSEVLLFLWSLTQHQESVVACAAFDALSMFQ
LSDFKLCQLPKEIYHPIKDKLMSSKKNIDDDNEDQKLALETSIDNSSPPGTAFVELLSRI
DHRALPGFQKLLSSMVRAEASSLPRGLAHTVSRASTHDRNMQSIPAFLMSKYEKCKSPGL
SQGLAAAVLFSFEPHFEEHQGKRLRRYLVNCARRYRQMLESLLHEVPVQPSEWHRTLHMP
QAWSTFMNRAYLACVEGRKAELEMQHSHGHIKDPEELATRQANAWLWVRDQMTEQLKGTS
RGNPSVQGNSVLALAGLAQAVALFVQQQTSSGATEQYQRNTEWLSLVADTIMVVLDGNHK
PKGPTLVWCQQVSSPSSTASSLLARSCAALSLSLLVPCLVTWDSDRIQDMVELLKNRIPG
QAKAGNSATLQMSCSLGLGLFLSKLYKEHFSDLCGKEGYLMMSKALDVLENAGLTMELEN
TEGAGLGLGIALSFLCNETIVDSRVHLTNMYDKLLRTLEKREADPDQRLQTLCFSLSCVC
VNAFHAGLLSPEEASRCSSKIQGVLDKHPQACGVSLSFGLLLHGLVSCGHAGIIHLAKQQ
AEVWRSILENKDVPELQQLAALNGIMGLLGSEQALLIVDSPSATGLFPSNKGSIIKFLEQ
IVSFSDDVGLGANTAWLLGHLFSASIRSVVGKTSVPSNYGYLTEGSILRSLFEFLLQAAK
TGPHLTFSRRMVPVVLESFVSDSQLTLPPVNWASVLSPLMRCTFGEETSQLCIKLALDQA
KSSSNLSSFLSSLLSPVVFIGLGELCKRELLQNLSRLVYIVSPSKIRDLYEGIFSNLWRN
ETDGSLRRDILEAHLSVLRLKEPPPSVIGWTITALQDLYHSYSESSLDDICLLVLARCLM
MIPFDQLENLVEDTKVIAAKTLVVRCMAVGTGKAPMKWLMPCIEWILGGDLSESRRDEFL
CCIVGAMVDSDHTLMNDQRQHWFLELIGQFKNAVYHSSGSSIHQMLLNCLTLLSMVCAVW
CTESLLQGVVSIGQSTPDHKRVHCGTLDLLPWLLPLTLPSLLKKDPWLQIRGKVLDWLLS
LRDQPQVQRNSQQKMLIQDTIISLRETEPFQKTAVWTDVIAHYQSRLEEEEREEKEKC
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacaaccaccaatttaccactgacaagaagtaacactggctctactctttca
agatggcggacgagcagcgtaaaagattgttatttccaaatcatttacaacaacaggagg
tacttaactttcctttggcctattcaacttctttttcaagtaggatggaggctttatgag
aatattgtgaaaaagatgacacctggatctattcttaatgggaaaagtgtagagattcct
gagttaatgcttttgtgggaaatgattgaagagtcatcagaagctgtcaacaggttatgc
tgccgttgcctggtactactggtttttaatggtcatgctgagttgggttatgtactcagt
ggattgttaaatgctctgccatcggcaagaaatttaagtggaataacggatgctgtgagt
tctttgatgacctttcaagttcaacagtgtgctcaaagtaacacagagtacaaatgcatg
ttttctttaagatctcctcctcatccatttattactgtgctgacaaactgtcctgattat
gcaggaaatctgattcaacatgtgagttcaatgcttctcaagagttgccacgagcctaaa
gccattttccagatgctagaaccttttttcaagtttgttcttcaggatccacaacccaca
gttagtgcacatgtgagacaagagcttcattcaactcttctgcaaactgcaagctctctt
ctgatgtcctgcttaggaattaatgagggaattaatgaacgtattagtcaaaggaagcag
cttgctgggcttattgtacgtttcttactatctgttgtaccttcctatcagattgatggc
agacgtatgacccaaacaaccttccttgtacattcccttgcaaactggcatcttgaacac
caagagcacatcaacagccattgtgttatcactgattttaagctgattgtgaatcatctg
ttatccttgtgttgggagagcttgtcgcatggcatagacatgacaatgtcacttctgttg
ttacaagcaattcagaaatcctgtccacaggcattttctcagttgtgtgttcttccaact
cttagcagtctactcttggcatcctccccattttatcatgctcatatcttaccactttgc
ttgtcaataatggcatctcagactcctggctcctctccattgatggctgtcaatcatgtt
ttccttgtgctgccaatccttcaaatcattgcttttccaaggcagtcattcagtgtctgg
gcacctaccagtgttgatcagtctgttgaatgcttggccatccaaatcttgagtcattta
gagatggaaattcctttgttgatgaaatattcctcacaccaagaacaaagtatggtatgt
ttcaacattttcagacattggttttctgtcattaatcccaggccctctcagcatggtgtg
gatttactgagcctgttatctaaacttcttgatcaaaaccttaagcctggggaggctgga
aatgacccttctgtagtggtggtatcactggcattgaaagcacttcaggaactttgtagt
gctgaggtggttgacttgtgcactgcttggaaagtcctttcagtgaaattaaggctggat
cgaagacctgctgtgctctgcaatttgtgtcagttgtttagcattgtacccaatctggtc
actgaatcacaagattatcagaattttaagagtgaagttcttttatttctatggtcctta
acccagcatcaggagtcagttgtggcttgtgcagcatttgatgctctctctatgttccag
ttaagcgatttcaagctttgccagctgcctaaagagatataccatccgataaaagacaag
ttgatgtcctcgaaaaaaaatattgatgatgataatgaggatcagaagcttgctttagaa
acatccattgacaactcgagccctccaggtacagcttttgtggaactcttatcgagaatc
gaccaccgtgctctgccaggttttcagaagctgctatctagcatggttcgagcagaagca
agctcgctaccacgtggtctggcccacactgtatcacgtgcttcaacgcatgacagaaac
atgcaatccattccagcattcttgatgtctaagtatgagaagtgcaaatctcctggtctt
agtcaaggacttgcagccgcagttctttttagttttgaacctcactttgaagaacatcaa
gggaaacgcctgagaaggtacctggtgaactgcgcgcgcaggtacagacagatgctggaa
tcactgcttcatgaggtgcctgttcaaccttccgagtggcacaggacactccacatgcca
caggcctggtccacatttatgaaccgtgcttatctggcttgtgtcgagggtcgcaaagcc
gagttagaaatgcaacacagtcacggccatattaaggatccagaagaactggcaaccagg
caagcgaatgcttggctttgggtaagagatcagatgacagagcaactcaaaggaacttca
agaggcaatccgtcagtgcagggaaattcagtattggctctggcgggcttggcgcaagct
gttgccctatttgtacaacagcagacttcttcaggtgcaacagaacaataccaacgaaac
acagaatggctcagtttggttgctgatacaatcatggttgtactggatggaaatcacaaa
cccaagggtcctactctagtctggtgtcaacaggtgtcttctccttcttcaacggcgagt
tcgttattggctcgttcatgcgctgcgttgtctctgtccctgttggtaccctgtcttgtt
acatgggattctgatagaattcaagacatggtggaactgttgaaaaaccgcatacctgga
caggccaaagctggcaattcagcgacactgcagatgtcatgttcattaggacttggtctt
ttcttgagtaaactctacaaggaacacttcagtgatctctgtggcaaagagggctatttg
atgatgtctaaagctttggatgttttagaaaatgctggcctaacaatggagctagaaaac
actgaaggagctggcttgggcttgggaatagctttgtcctttctatgtaatgagaccata
gtggactcaagagtacacctgaccaacatgtatgacaagcttctgcgcacgttagaaaaa
cgtgaggctgatcccgatcaaaggctacagacattatgtttcagtttgtcgtgtgtctgt
gtaaacgcttttcacgccggtcttttatctccggaagaagctagtaggtgtagtagcaag
attcaaggggtgttggacaagcaccctcaggcgtgtggagtatctttatcgtttggcttg
cttcttcatgggcttgtttcttgtggtcatgctggcattattcatttggctaaacaacaa
gctgaagtttggcgaagtattctcgaaaataaggacgttcctgagcttcagcagcttgct
gcattgaatggcattatgggattactgggttctgagcaagcgctgttaattgttgattct
ccttcagcaacgggcctttttccctccaacaagggaagcataatcaaattccttgagcaa
atcgtctcattttctgacgatgttggtctgggcgctaacacagcctggcttctcggtcat
ctcttctcagcttccataagaagcgtagtcggcaaaacaagtgttccatcaaactatggc
tacttgaccgaaggcagtatcttaagatcgctgtttgaatttcttcttcaagcagcaaag
acaggtcctcaccttacattttctagaaggatggtgcccgttgtattagaatcatttgtc
agcgactctcaattgacattaccgccagtgaactgggcatcagttttaagtcctctcatg
agatgcacgtttggggaagaaacaagtcagttgtgcatcaaattagcattggatcaagcg
aagtcctcatcaaatctttcttcatttctctcctctttgctgagtcctgttgtatttatt
ggtttaggggagctgtgtaaaagggaactcttacagaacctgtcaagactggtttatatc
gtatcaccttcaaagatcagagacttgtatgaaggaatattttcaaatttgtggaggaac
gaaacggacggtagtttacggagagacattctggaagcacatctctcagtacttcgttta
aaggaacctccgccttcagtgattggatggaccataaccgccctgcaagacttgtaccac
tcttattctgagagcagtttggatgacatctgtttgcttgtactggctcggtgtttgatg
atgataccttttgatcaactagaaaatcttgtggaagacactaaggtcatagctgcgaaa
acgttagtagttcggtgcatggccgtcggcactggaaaagcgccaatgaaatggttaatg
ccttgtattgaatggatactcggaggggatctcagtgaatcaaggcgtgatgaattctta
tgttgtattgttggagccatggttgattccgaccacacactcatgaatgatcagagacag
cattggttcttggagctgattggtcagtttaagaacgcagtttatcattcttcgggatcg
tcaattcaccagatgttgttgaattgcttgaccctgctgtcgatggtttgtgcggtctgg
tgtactgagtcattacttcaaggggttgtgtccatcggccagagcacaccagaccacaag
agagttcactgtggaacattggacttgttgccttggttactacctttgacattgccaagt
ttgctgaagaaggatccgtggttacagataagaggaaaggtgcttgattggcttttgtca
ttaagagatcagcctcaagtccaaagaaattcgcagcagaaaatgctgatacaagataca
attatttcattgagggaaactgagccttttcaaaagacagcagtatggacggacgtaatt
gctcattatcaatcccgattggaagaggaagaaagagaggaaaaggaaaaatgttaa
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