Acropora digitifera (stony coral): 107352391
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Entry
107352391 CDS
T04352
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107352391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adf03041
]
107352391
Spliceosome [BR:
adf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107352391
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
PRP4
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
107352391
NCBI-ProteinID:
XP_015774210
LinkDB
All DBs
Position
Un
AA seq
367 aa
AA seq
DB search
MSDDEDRAPVVKKQRIHFGSLEAVEKERLVEDPSSGTKEKGDDQEGEENGVSSAVLAGIR
AGNINISEGEYLELTEDQTSERHQELLEEFERRKKARAITVPTDDASVKARLRELEEPIT
LFGEGPPERRDRLRKLLSELGEDVPRKEEEEKAKHEPELEEDVWYHEGPSELKVARQWIA
KYSLPRACERLKQMRIEQARPDPEKAAKTQELHRRLRGLNNFCSQIGDDRPLSFCQFSPD
SSMLATASWSGLCKLWSIPDCEPIAVLRGHNERVGSIAFHPQATTSLDESGPCMASCDAN
GVVLLWSLNMDTPLANIEGHEKRVSRVAYHPSGRFLATCCFDHSWRLWDLEQLEEVLHQV
VFFVSLV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaagatcgagcacctgtggttaagaagcaaaggattcattttggaagt
cttgaggctgtggagaaagaacgcctggtggaagatccctccagcggtacaaaggagaaa
ggggatgaccaggagggcgaagaaaacggtgtatcatcggctgtgttggctggaattaga
gcgggaaatataaatatcagtgaaggagaatacctggagttaacagaagaccaaaccagt
gagaggcatcaggaactcttggaagaatttgaacgaaggaagaaggcacgtgcaattaca
gtacccacagatgatgcatcagtgaaggcaagactgagagaacttgaggaaccaatcact
ttatttggtgagggcccacctgagcgaagagacagattgagaaaacttttgtctgagctt
ggggaagatgtacctcgaaaggaagaggaagaaaaagcaaaacatgaaccggagttagag
gaagatgtctggtaccatgaaggcccctctgaactcaaagttgcccgccaatggattgct
aagtattctttaccaagggcttgtgagagactcaaacaaatgcgcattgaacaagccagg
cctgatcctgaaaaagctgccaagacacaagagttgcatcgcagactacgggggctgaac
aatttctgtagtcagattggtgatgacaggccactttctttctgtcaattttctccagac
tcaagcatgctggcaacagcatcctggagtggcttgtgtaaactttggtcgattccagat
tgtgagcccatagcagttctgcgaggtcacaatgaaagagtgggctcgatagcttttcac
ccacaagctacaacgtcattggatgagtctggcccttgtatggcttcttgtgatgcaaat
ggagttgtacttctttggtctctcaacatggacacacctcttgctaatattgaaggacat
gaaaagcgggtctctcgcgtggcataccatccatctggacgatttctggcaacttgctgt
tttgatcattcatggagactgtgggatttagaacagttggaagaagttcttcatcaggta
gttttcttcgtttctcttgtttaa
DBGET
integrated database retrieval system
