Acropora digitifera (stony coral): 107352708
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Entry
107352708 CDS
T04352
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107352708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107352708
03012 Translation factors [BR:
adf03012
]
107352708
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107352708
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
107352708
Translation factors [BR:
adf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107352708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
AAA_22
nSTAND3
NACHT
ATPase
AAA_16
Cas3-like_C_2
NPHP3_N
NB-ARC
ABC_tran
AAA_19
TsaE
Motif
Other DBs
NCBI-GeneID:
107352708
NCBI-ProteinID:
XP_015774501
LinkDB
All DBs
Position
Un
AA seq
786 aa
AA seq
DB search
MKNELLKLIKSEQVLVISGETGCGKTTQVAQFILDDAIEQGCGSTCRVICTQPRRISAIS
VAERVAAERGESCGGNSSVGFQIRLESKLPREQGSILYCTTGILLRWLVSDPLLLGTSHI
ILDEIHERDVLSDFLLIIVRDLLPKRPDLKLVLMSATLNSEMFSSYFGNCKMAHIPGFTY
PVQEFYLEEIIERTGYHVDQDRNQRAQRPEPKWKKYRDRGTKSLAKDNWIAKSQQEDKEM
MWKHHLDSIQHKFSPRTIATLNNMYMEKIDLDLVVRVVTHISLHMEEGAILVFLPGWDDI
SKVHDKLKEEKMFSSDKFRIIPLHSMMPSSNQKEVFDRPPEGVRKIVIATNIAETSITID
DVVFVVDGGKVKEKTYDVQNKIACLQPVWISKASSRQRRGRAGRVQAGYCFHLFTKYHAD
ALEDYQLPEMLRTPLEELCLQIKILKLGMIRPFLTKALQPPEDQAVINALEVLHQLVNHL
ASVRCKQRAACYLVNAFLLLNNCFSTWKTYSQGKQKEAERARAYFAGDTRSDHLALLRAF
QGWEQASRGGREREFCWRNFLSGNTMKMIKDMKQQFSSLLRDIGFLDSSDPKATSANRNS
ENLKLVKAILCAGLYPNVAKIEHHRTFKRPPILRTFEDGRVYLHPKSVNAQVIVFDDNFL
IYHEKMKSSSLFLYDSTMIAPFPLLFFGGDITVFKEEGQETVAVDDFIKFKSPTRIANLV
KELRVELDKLLKQKIAQPKMKLSAGTGVGSKENALLRAIIDLITSEENSNWRKQRAMTDY
PQVMTH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgaattactgaaactcataaaatctgaacaggtgttggtcatcagtggggaa
acaggctgtggaaaaactactcaggttgcgcagtttattttggatgatgcaattgaacaa
ggttgtggatcaacatgtcgtgttatctgcacacaaccaagaagaataagtgcaatctca
gtagcagagagagttgctgctgaacgtggcgaaagttgtggtggaaatagcagtgttggt
tttcagatcagactggaaagtaaattacccagagagcaagggtctattctgtactgtacc
acgggtatcctccttcgatggcttgtctctgacccattacttttgggcaccagtcacatc
attcttgacgaaattcatgaacgagatgttttgtcagatttcttgctcatcatcgtgaga
gatcttttgcctaaaagacctgacctgaaacttgtcctgatgagcgcaacattgaattca
gaaatgttttcatcttactttgggaactgtaaaatggctcatattcctggcttcacatat
cctgtacaagaattctatcttgaggaaattattgaaagaacaggttatcatgttgatcaa
gacagaaaccaaagggctcagagacctgagcctaaatggaaaaagtatagggacagagga
acaaaaagccttgcaaaagataactggattgccaaaagccaacaggaagacaaagagatg
atgtggaaacatcacttagattccatccaacataaattttcacccagaacaattgcaaca
ctgaacaacatgtacatggagaagattgaccttgatcttgttgtccgtgttgtcactcat
atctcacttcatatggaggaaggagccatacttgttttcctgcctggatgggatgatatt
agcaaagttcatgacaaattgaaggaagaaaaaatgttctcttcagataaatttaggatc
attcctttacattccatgatgccgtcatcaaaccagaaagaggtgtttgatcgtcctcca
gaaggtgtaagaaagattgtcattgctaccaatattgcagaaaccagcattactattgat
gatgttgtctttgttgtggatggtggcaaagtgaaagaaaagacttacgatgtacaaaac
aaaatcgcgtgtttgcaaccagtgtggataagcaaggcttcctcacggcaaaggcgaggc
cgtgctggaagggttcaagctggctactgcttccatttgttcactaagtaccatgccgat
gcactggaggattaccagctgccggagatgttacgcacccctctggaagaactctgtctt
caaataaagattttgaagcttggtatgatcagacctttcctaacaaaagcactccagccg
ccagaagatcaagccgtgatcaatgctttggaagttcttcaccaactggtaaatcattta
gcttccgtaagatgcaaacagcgagctgcatgttatctagttaacgcatttttattgtta
aataactgcttttccacatggaaaacttactcacagggtaaacagaaggaagcagagaga
gcccgcgcgtattttgctggagatacacgaagcgatcatctagctttattgagagctttc
cagggatgggaacaagcatcaagagggggacgtgaaagggagttctgctggagaaatttc
ctctctggaaacactatgaagatgatcaaagacatgaagcagcagttttcgtcacttctt
cgtgatatcggtttccttgactcctcggatccaaaagctacctctgcaaatcgcaattca
gagaatttaaagctcgtcaaagctatcctatgcgcaggtctgtaccctaatgtggcgaaa
atcgaacaccatcgtacatttaaaaggcctccaatacttcgaacctttgaagacggccga
gtatacctccacccgaagtcagtgaatgcccaggtcatagtttttgacgacaacttcttg
atttatcacgaaaaaatgaagtcttcctcgttgtttctgtatgacagtaccatgatagcg
ccttttccgttgctgttctttggtggcgatataactgtgtttaaggaagagggccaagaa
actgtcgcagtcgatgatttcatcaaattcaaatctcccaccagaatcgctaatttagtt
aaggagctgcgtgttgaacttgacaaattactaaaacagaaaatagcacagccaaagatg
aagctaagcgctggtactggagtgggaagcaaagaaaatgctcttttgcgagctatcatc
gacttgataaccagcgaggaaaactcaaactggaggaaacaaagagcaatgaccgattat
ccacaagtgatgacgcattag
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