Acropora digitifera (stony coral): 107353183
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Entry
107353183 CDS
T04352
Name
(RefSeq) putative pseudouridine synthase C1A4.09
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adf03016
]
107353183
Enzymes [BR:
adf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
107353183
Transfer RNA biogenesis [BR:
adf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107353183
Prokaryotic type
107353183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
107353183
NCBI-ProteinID:
XP_015774991
LinkDB
All DBs
Position
Un
AA seq
643 aa
AA seq
DB search
MRAKGTKVTCQYDNKYMDSRKADSEYTRFSLRKTNMETLEAIQRLSTCLDVQPSAFSYAG
IKDKKAVTTQHVVVRGISPEQMSAIEGHPSLKGIKIGSYRGRVSGPLRMGGLSGNHFKVV
VRKVQCRKSHARNQDECTKNIQEAVSSLSFNGFLNYFGAQRFGMDDKEVNACDIGLAMLQ
GNMVHAVKLLFTPSEHNPDHDVNCAKRCFCEAGDVQGALAKMPAYKIREILVLKALHRHG
TDTDGCRKALLNVPYSMRLLFVHSYCSLVWNMMASYRIQHYGREEANEGDLIVDPPTSTH
DLDREAAGNGDFGGFDSSGDENSGIRRDRVRCIANHEQGKYSLVDVVLPLPGYGVQYPAN
DVGEIGPVKSNQLPSSLSCNPRDGKIGTAESIIVRIDRFDDTSVNFRRDKPRLLSTLHRT
ISNDGKIYFLDFNLKAKFHGREVCLTTLKETILNHKGADERKIYTCEHVCLEVGNAGSLV
TNSSSGGKLWPGKRCCVWNKNRFYKLAPMNEGPKCRSCLGSKCLKENGTTKQCRPGDKCV
AISLKQKQKQNKTKKNSSVVPIMLGCSSDHSLRGYTCNDGCKREVNLVGSGTSTVCVRCC
TGNKCNGVGGETPKNSTQMVQLKDKVDNPVQLNGVHPLKRNVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaaaaggaacaaaggtgacttgccagtatgacaacaaatatatggattcaaga
aaagctgacagtgaatatacaagattttcgttacgcaagacaaatatggaaactcttgaa
gccattcagcgcttgtcaacctgtttggatgtccagccatcagccttcagttatgctggt
attaaagataaaaaagctgttactacacagcatgtggtagttagaggaatttcccctgag
cagatgtctgccattgaaggtcacccctccctgaaaggcataaaaattggtagctacagg
ggaagagtgagtggaccactcaggatgggtggtctgagtggaaatcatttcaaggttgtt
gtcagaaaagtgcaatgtcgtaagagtcatgcaagaaaccaagatgaatgtacaaagaat
attcaggaggctgtttcgtctttatcgtttaatggcttcttgaactactttggagctcag
agatttggaatggatgacaaagaagtaaacgcttgtgacattgggctagccatgctgcag
ggaaacatggtccacgctgtcaagttactctttaccccatcggaacataaccctgaccac
gatgttaattgtgctaaaagatgtttttgcgaagcgggtgatgttcaaggcgccctggct
aagatgcccgcctacaaaatccgcgaaatcctggtactcaaagctcttcacagacatggg
actgatacggatggctgtcgcaaagctttgctgaatgtcccgtactcaatgcgattgctc
ttcgttcatagctactgtagtctggtgtggaacatgatggcctcctataggattcaacac
tatggacgagaagaggcaaatgagggagatttgattgtggatccgcctacgagtacgcat
gaccttgatagagaagccgctggaaatggtgattttggcggtttcgactcgagtggtgac
gagaacagcggtattaggcgtgatcgtgtgaggtgtatagccaatcacgagcaaggaaaa
tatagcttggtcgatgtcgtgctgccattaccaggatacggcgttcaatacccagcgaat
gatgtgggagaaattggtccggtgaagagcaatcagctgccgagttcgctgtcatgtaat
ccccgtgacgggaaaatcggcactgccgaatcgattattgttcgaattgaccgcttcgat
gatacttcagtcaatttccgaagagataagcctcgtcttttgtcaactttgcatcgaacc
atttcgaacgatggaaaaatctacttccttgactttaatctgaaagcaaaattccacgga
cgggaagtgtgccttacaacgctcaaagaaacaatactcaaccacaaaggcgctgacgaa
agaaagatttacacttgcgaacatgtttgtctggaagttggaaacgcaggaagtctggta
actaattcatcctcgggtggtaaattgtggcctggaaagagatgctgcgtctggaacaaa
aatagattttacaagctggccccaatgaatgagggtcctaagtgccgaagctgcctggga
agtaaatgcctgaaggaaaatggaacaacaaagcaatgtagaccgggtgacaaatgcgtc
gccatctcgctgaagcagaagcagaagcagaacaagacaaaaaagaactcaagcgtcgtt
cccattatgcttggctgttcaagcgaccactcattgcgcggttacacatgcaatgatggt
tgcaagagagaagtcaacctcgtggggtctgggacgagcactgtttgtgtccgatgctgc
actggaaacaagtgcaacggggttggaggagaaacgccaaaaaatagcactcaaatggtg
caattgaaagacaaagtggacaatccggtgcaattaaatggagtgcacccgttgaaaaga
aatgttgtgtaa
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