Acropora digitifera (stony coral): 107353626
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Entry
107353626 CDS
T04352
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107353626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adf03041
]
107353626
Spliceosome [BR:
adf03041
]
Complex B
Other components
Prp19-related factors
107353626
Complex C
107353626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
RRM_YTH1
zf-CCCH_PARP12
zf-CCCH_DUS3L
RRM_occluded
zf-CCCH_3
zf-CCCH_12
zf-CCCH_10
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107353626
NCBI-ProteinID:
XP_015775451
LinkDB
All DBs
Position
Un
AA seq
471 aa
AA seq
DB search
MATSKSANTYNRQNWENSGQFRVNISDKIIAIGWPTDLIKDAAPSLDLFLRPLASTPLGM
ELGTILHRTQSDALSQLLGHVQTSFTLKFFKMFTCGMFQGLPVQVRDHALGMKDDVPKSD
VNKEYYTQNVEKELANSDGTTPGGTLGKANAPSDLLLKLARTTPYYKRNRPHICSFWVKG
ECKRGDECPYRHDMPTDPNDPLADQNIKDRYYGTTDPVAARLLSQAKSMPSLEPPSDKSI
TTLYVGGLEGKVEEGDLRDYFYQFGELRSITMVPRQNCAFVCFTTRAAAETASERSFNKL
ILKGRRLKIMWGKSQGQSPVPGKQGGTPLAPVPGLPGALPLPPTEDKNQPPNFFNLNTPS
SAQASLPPPNIPLTLPPPPGQIPGLPPPPMGHPLPPPPGGFPPPPLFGHPPFRPPVPFYG
VPPPPRVPPPVRQGVPRPPPGPPPIHYPSQDPHRLGAGKGGEEGQRPAAST
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaagagcgcgaacacatacaatcgacaaaactgggaaaattcgggtcaa
tttcgtgtaaacatcagcgataaaataattgccataggatggccaacagatttgattaaa
gatgcagcaccttccctggatctgtttttaagacctttagcgtctaccccattaggaatg
gaactaggaaccattttgcatcgtacacagtctgatgctctaagccagctattgggacat
gtgcaaacatctttcactttaaaattcttcaaaatgtttacttgtggcatgtttcaaggt
ttgcctgtgcaagtcagggaccatgctctgggaatgaaagatgatgtgccaaaatctgat
gtcaacaaagaatattacactcagaatgtagagaaagagttggccaattcggatggaacc
acccctggtgggacacttgggaaagccaacgctcctagtgatttattgctcaaacttgca
aggacgacgccatactacaagagaaaccgacctcatatatgttcattctgggtcaaagga
gagtgcaaacgaggggatgaatgcccctacagacatgacatgcctacagacccaaatgat
cctttagctgatcagaacataaaagacaggtactatggaacgactgaccctgtggcagca
cgtcttttgagtcaggctaaaagtatgccatccttggaaccaccatcagataaatcaatt
acaactctttatgtcggaggccttgaaggaaaagtggaggaaggagatctcagggactac
ttttatcagttcggggagctgcgatcgataacaatggttccacgacagaactgtgcattt
gtgtgctttacaaccagagcagcagctgaaaccgcctctgaacgttccttcaacaaactg
attctcaagggaagaaggcttaagatcatgtggggcaagtcacaaggacagtcacctgtc
cctggaaaacagggaggcacccctttagcacctgtgcctggtttaccaggagctcttcca
ctgccgccaacagaggacaaaaaccaaccaccaaatttcttcaacctgaacacaccatcc
tcagcacaagcatcactccctcctccaaatattccacttaccttaccacctccccctgga
cagattcctggtttgcccccacctcccatgggacatcccttaccccctccacctggagga
tttccacccccacctttatttggccatcctcctttcaggcccccagttccattttacggt
gtccctcctcctcctcgtgtgccgccgcctgtgcgtcaaggtgtgccacgcccaccacct
ggtcctccaccaatacactatccatcgcaagatcctcacagactgggtgcagggaaaggt
ggagaagaagggcaacgccctgctgctagcacttag
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