Acropora digitifera (stony coral): 107354525
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Entry
107354525 CDS
T04352
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107354525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107354525
03009 Ribosome biogenesis [BR:
adf03009
]
107354525
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107354525
Ribosome biogenesis [BR:
adf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
107354525
Pre-60S particles
107354525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
HEAT_EF3_N
Cnd1
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
IBN_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
MMS19_C
Adaptin_N
CEP104-like_TOG
Ltn1_1st
Dopey_N
INTS7_N
HEAT_MROH2B_1st
CLASP_N
UNC45-central
RTP1_C1
DUF3689
DUF1475
Motif
Other DBs
NCBI-GeneID:
107354525
NCBI-ProteinID:
XP_015776495
LinkDB
All DBs
Position
Un
AA seq
891 aa
AA seq
DB search
MAWQPDQDGLQQIIQLLKESQSPNNEVQRAVQQKLESLNQFPDFNNYLIFVLTKLKTEDE
PTRSLSGLILKNNVKSHYHTFPDPVKEFIKSECLEAIGDPSPLIRATIGILVTTVAAKGD
LTNWPQLLPALCQLLDSEDYNVCEGAFGALQKICEDSAEQLDSDALNRPLNILIPKFLQF
FRHASPKIRSHAIACVNQFIVTRTQALMVHIGTFIENLFALAGDEDPEVRKNVCRALVML
LEVRADQLIPHMNNIVEYMLMRTQDKDENVSLEACEFWLTLAEQPICKEALSPHLNRLVP
ILVNGMKYSEIDLILLKADNEDDEAVPDSEQDIRPRFHKSKTHSQQHDQDGAIEGDSEGE
DDDDNMDDDALSDWNLRKCSAAALDVLANVFRDELLPVLLPILKETLFHPDWEAKESGIL
VLGAIAEGCLTGIAPHLPELIPFLINSLSDKRALVRSITCWTLSRYAHWVVSQPHEAYLQ
RLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLSFILETLVFAFNKYQHKNLL
ILYDAIGTLADSVGHHLNKPEFINMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALRS
GFLPYAEPVFQRCVSLVEQTLAQSVASQTHPEQFEPPDKDFMIVALDLLSGLAEGLEGQI
EQFVIRSNTMTLLFQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIGDFLPILGQNLNP
EFISVCNNATWAIGEISVQLGADMKEYINLVLQQLITIINRPHTPKTLQENTAITIGRLG
LVCPQEVAPLLPQFIQKWCTSLRNIRDNEEKDSAFRGICNMIGINPGGVVQDFIFFCDAV
ASWVNPGPDLKEMFLKILHGFKNQVGEENWKRFSSQFPPALRERLSTNYGV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaaccggaccaagatgggttacagcagataattcagcttttaaaagaaagt
caaagcccaaataatgaagtacagcgagcagttcaacaaaaactggaatccttgaatcaa
tttccagacttcaataattacctgatatttgttcttacgaagttgaagaccgaagacgaa
ccaacgcgttcgctgtcaggtttaattctcaagaacaacgtcaagtcccattaccacact
ttcccggatccagtgaaagaattcataaaatcagaatgtctcgaggctatcggcgaccct
tcgccgcttatacgagcaacaatcgggattttggtgacaactgtggcagcgaagggagat
cttacgaactggccccagcttttgcctgcattatgtcagcttttggatagcgaagactac
aatgtttgcgagggtgcatttggagctttgcagaagatctgtgaggattctgcagagcag
cttgacagtgatgcacttaaccgacctctcaacatattgatcccaaagtttctgcagttt
ttcagacatgcaagccctaaaataaggtcccatgctattgcttgtgttaatcagttcatt
gtaacaaggactcaagctcttatggttcacattggaacattcattgagaatctgtttgca
cttgctggagatgaggaccctgaagtcaggaagaatgtttgccgtgctcttgttatgctt
cttgaagtcagagcagatcaacttattccacacatgaataacatagtggagtacatgtta
atgaggactcaagacaaagatgagaatgtttcacttgaagcttgtgaattctggctaaca
ttggctgagcagcctatctgcaaagaagctcttagtccacatctgaataggcttgttcca
attctggttaatgggatgaagtattctgagattgaccttattctcttaaaggctgataat
gaggatgatgaagctgttccagatagtgaacaagacataagaccaaggtttcataaatcc
aagacacacagccaacagcatgatcaggatggggccattgagggtgatagtgaaggagaa
gatgatgatgacaacatggatgatgatgcgttgtctgattggaacctgcgaaaatgctca
gcagctgctttagatgtgctggctaacgtcttccgagatgaactgttacctgtgcttctg
ccgatcttaaaagaaacactcttccaccctgactgggaggccaaagagtcaggaattctt
gtcttgggagcaatagcagaaggctgtttaacaggaattgcacctcacttgccagagctg
attccttttctcatcaactcactttccgataaaagggctttggtgcgctcaatcacttgc
tggacactgagccgttatgctcactgggtggtaagccaaccacatgaagcataccttcag
cgacttatgacagagcttctgaaaagaatcttggatagcaacaagagagtgcaggaggca
gcttgcagtgcttttgccactctggaagaagaggcctgtactgaacttgtcccatatttg
agcttcatcctggaaacgttggtgtttgcttttaacaagtaccagcacaagaacctcctg
attctttatgatgcgattgggacacttgctgactctgttggacatcacctgaacaagcca
gagttcatcaatatgttgatgccaccattaattcagaaatggaaccagctgaaggatgaa
gacaaagatctctttcctttgctggaatgtctttcttctgttgccacagctctgcgatct
ggatttcttccttatgctgaacctgtgtttcagagatgtgtttcacttgtggaacaaact
ttagctcagagtgtggcatctcagacacacccagagcagtttgaaccaccagacaaagat
tttatgattgtggctttggatttgctgagtggattagcagaaggtttggagggacagata
gaacaatttgtcattagaagcaacacaatgactctgcttttccagtgtatgcaggacaag
atgcccgaagtgagacaaagctcttttgcccttcttggtgatcttaccaaggcttgcttt
caacatgtcaaaccctgcattggtgactttttgccaatccttggacaaaatcttaatcct
gagttcatttctgtttgcaacaatgctacatgggcaattggagagatctcagttcagcta
ggcgctgatatgaaggagtacattaacctggtgctccaacaacttatcaccatcatcaac
aggccgcacacgcccaagactctgcaagaaaatactgccatcacaattggtcgtctgggc
ttagtttgtccgcaagaagtggcacctttgttaccgcagtttattcaaaagtggtgcaca
tccttgcgaaacatcagggacaatgaggagaaggactcagccttcagaggcatctgtaac
atgatagggatcaatcccggtggggttgttcaggatttcatatttttttgcgatgccgtg
gcctcttgggtgaacccaggccctgatctcaaggaaatgttcctaaagattcttcatggc
tttaaaaatcaggtgggggaggaaaattggaagcgcttttcaagccagtttcctcctgca
ctccgcgaaagactatctacaaattacggcgtgtga
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