Acropora digitifera (stony coral): 107354882
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Entry
107354882 CDS
T04352
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
adf03036
]
107354882
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107354882
microRNA pathway
RISC loading complex
107354882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dimer
Ribonucleas_3_3
Dicer_PBD
Dicer_dsRBD
ResIII
DEAD
Helicase_C
PAZ
Dicer_platform
SWI2_SNF2
SLFN-g3_helicase
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
107354882
NCBI-ProteinID:
XP_015776860
LinkDB
All DBs
Position
Un
AA seq
1531 aa
AA seq
DB search
MELEENEGISSASTSSGHSRSEPESNMIARPRPYQVELFELAKERNTIICLGTGTGKTFI
SVMLIKEMAYQVRESYKNGGKRTFFLVNTVPLASQQAKVIEKHTDLKVEKYIGAMNVDLW
DKEKWEDELNKSNVLVMTAQIFLDLLNHAYIKLSQVNLLIFDECHHAKKEHPYRQITQAF
KEYPKNDLPKIMGLTASVVNGKVKPWSLHSEIKELERTLRATCETSQDEEVDEFAARPKE
NVVVFSQHEIQDDLVVLISILQDVLDQGRDFLIDCRVARSGPLSDAHWYAKAVLRECKET
LLELGPWAANNVAESLIRDLGRACHTYNVYGTEGRLFCEFSATQLRQLQSVYRNYLSNSG
GDLEDSGQSYIMPKLQKLLMVLREYRPSNRNETEQDNKLCGIVFVERRYTAKILSEQINI
AAQLDHELSFVQSDFVIGHGTGGRVNFSAETEMNFKKQENVLRQFRQHKFNLLIATCVVE
EGLDIPKCNLVCRFDFPKTFRSYVQSKGRARARDSCYCLLVDSEEKMEKTCELENMQQIE
NVLSEMCRDRDEPTEEECDEAADTHFLPPFQPPNGEGARLTMSSSISLLSRYCSKLPADR
FTALKPVYKIQELGKDAYACKLEMPTTCPLRTTIIGCPMPRKNLSKMAAAYQACKKLYEM
GELAENLLPVLSESDDESETEEEVEPGSDEKKKAKAGTKKRKRVYDRKVFLVRSFKLYPN
YGEVTVSLCSSTALRVFAPSSMENQETARKFHCFLFSHILREEVEIKPKNPDGEADGYFV
VLVKKSGRDVDYGAMKEAMGLVNPRYTRSVEEDMVVTRNDQDFQQSKLQRIAVLRVRHDL
SPLSPFPYSSNSRQRYKSYWEYFGERLKIKDQPLIEVKHVSNRVNFLVDRKRESIRKGLE
LFPELCNVCTIRASLLSVSLLLPSILHRVNALYLVGDVKRMVAGVRHKTDESGLPSIGAK
DAIDEISLLRADEKNTDEEMQVDDDDSSARDGDFYEEGLEDGELINDDDDDSEEFPGLFS
DLKSLFSSSRGPPDHPDTALVLQALTTTHSVDAFHLERLEMLGDAFLKLAVSLHLFWNYQ
DKDEGKLTVRKVRQISNKALYHAAVKTKLAGYQQCTQLARDNWCPTGSQFRKPPPETTPS
SGDAVKGMDIDSPTTVDAEMEVEGAVGEDSQSVCESAAKPDIQVIADKSIADSMEALIGA
YLISCGYVGALRFLKFLGLKVLPDDADRRTIETSLAKSEAGCYAKFWEQPESNMTGAGDN
AAMAARLESGLENFEDNSIGYRFRSKLYLVEALTHASYHPNRITPCYQRLEFLGDAVLDF
LVTQHLYFRHGKLSPGDLTDIRQALVNNNIFAVIAVKKDFNKYLKEMSPTLFKIIENFIT
FVDDENEERKQNYSNEVSADPFVIVSEENAEGIDTPKVLGDIFESVAGAVFLDSGMDLTK
IWGVYYRMMKPYIDHYSVNIPMNPIREIHEKSHKVECSKPEELPNGKIQCTLQVDWGEFV
GKGSNSRIAKATAAKLALQARERQQASQKNE
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggaactagaagaaaacgaaggaatttcatcggcttccacaagcagtggtcatagtaga
agcgaaccagagtcaaatatgattgctcgtcctcgtccataccaagtagaactttttgaa
ctagccaaagaaagaaacacaatcatttgccttggaacaggcactggcaagacgtttatc
agtgtcatgttgataaaggaaatggcttatcaagttagagagagctacaaaaacggagga
aaacgaaccttcttccttgtcaacacagtgccattagccagccagcaagccaaagtaatt
gagaaacacacagatttaaaggttgaaaaatacattggagcaatgaatgtagacctttgg
gacaaagagaagtgggaagatgagctcaataaaagcaatgtgttggtcatgacagctcaa
attttccttgatcttctaaaccatgcttacattaaactctctcaagtgaacctgttaata
tttgatgaatgtcaccatgctaagaaagaacatccatacagacagattacacaagctttc
aaggaataccctaaaaatgacctccctaagatcatggggttaacagcttctgtggttaat
ggtaaagtcaaaccttggagtttgcattcagaaatcaaagagctggaacgtaccttgagg
gcaacgtgtgagacaagtcaagatgaagaggtggatgaatttgctgccaggccaaaagaa
aacgttgtggtattttcacaacatgaaattcaagatgatttagttgttctgatctcaatc
cttcaggatgtcttagatcaaggcagggacttcttaattgactgtcgagtggcacgcagt
ggacctctgtcagatgcacactggtatgcaaaggcagtgctgagagaatgcaaggagact
ttattggaactgggtccttgggcagccaacaatgttgcagaatccttaatcagagatctg
gggagagcatgccatacatacaatgtttatggtacagagggacggctgttttgcgaattt
agtgcaactcagttgaggcaactgcaaagtgtgtatcgcaattacttgtcaaacagcggt
ggtgatctggaggacagtggacagtcctacattatgcccaagctgcaaaagttgttaatg
gttttaagagaatatagaccttcaaatagaaatgaaacagaacaagacaacaagctgtgt
ggaattgtttttgtagagcgaagatacacagctaaaatcctaagtgaacagatcaacatt
gcagcacaactggaccatgagctttcctttgtccaaagtgactttgtcattggtcatgga
actggtggaagggttaacttttccgccgaaacagaaatgaacttcaaaaagcaggaaaat
gtcttgcgacagtttaggcagcataagttcaacctgctcattgcaacctgtgttgttgaa
gagggactggatatccccaagtgcaatctggtttgccgctttgactttccaaagactttc
cgctcatatgttcaatcaaagggtagagcccgtgctagagattcctgttattgccttctt
gtggacagcgaagagaaaatggaaaagacatgtgaactagagaacatgcaacaaattgaa
aatgtcctgtctgagatgtgccgtgatcgcgacgagccgactgaagaggaatgtgacgaa
gcagcagacacacatttcttgcctccatttcaaccaccaaacggagaaggagccaggctt
actatgagcagtagtatatcgctgttatccagatattgttccaaattgccagccgatcgc
ttcacggcactcaaaccagtttacaaaatccaagaacttgggaaagatgcttatgcgtgt
aaattggaaatgcctaccacctgtccactgcgtacaactatcattggctgtccaatgcca
cgaaagaacctctctaaaatggccgccgcttatcaagcctgcaaaaagctctacgaaatg
ggcgagcttgctgagaatttgctacctgtcctcagcgaatcagacgacgaaagcgagacg
gaggaagaggttgaacctgggtctgacgagaagaaaaaggcgaaagctggaacaaaaaaa
cgaaaacgagtctacgatagaaaggtatttcttgtgcgatcgttcaagctgtaccctaat
tatggagaagtcacagtttctctgtgtagtagtaccgccttacgcgtctttgcgccctcc
tctatggagaatcaggaaacagcgcgtaaattccattgtttcttgttcagtcacatcctt
cgcgaagaagtggaaatcaagccaaaaaacccagatggagaagcagatggttacttcgtt
gttttggtgaagaaaagtggacgtgatgtggactacggtgccatgaaggaggccatgggg
ctcgtaaatccgcgttatacgaggtcagttgaagaggacatggtagttacaaggaatgac
caggatttccagcaaagcaagttacagagaattgctgttttgagagttcgccacgatctt
tcaccactgtctccgttcccatacagctcaaactctcgtcaaaggtacaaaagctactgg
gagtattttggagagcgtttaaagatcaaagatcagcctctcattgaagtcaaacatgtc
tccaatagagtaaattttttggtcgacagaaagcgagaatcaataaggaagggcttggaa
ctctttccggagctgtgtaatgtatgcactatccgcgcgtctcttctaagcgtgtccttg
ttgctaccctctattcttcaccgtgtcaacgcactttatctcgttggcgatgtcaagagg
atggtagctggagtgcgtcataagacagatgaatctggattgccttccatcggcgccaaa
gatgctattgatgaaattagtttacttcgtgctgatgaaaagaatactgatgaagagatg
caagtggatgatgatgacagcagcgcccgtgatggcgatttctatgaggaaggcctagag
gacggggaactgatcaatgacgacgacgacgattctgaggaatttcctggcttgttttcc
gacctcaaatctttgttcagcagcagccgtggaccacctgatcatcccgatacagctctt
gtgcttcaagccctcaccaccacgcacagtgtagacgcgtttcacttagagaggctcgag
atgcttggtgacgcattcttgaagctggcagtgtcgctgcacctgttctggaactaccaa
gacaaagatgaaggtaaactgacagtgcgcaaggtaaggcaaatcagcaataaggcgttg
tatcacgcagctgttaagacaaagttagcaggttaccagcaatgcacgcaactggcacgt
gataactggtgcccaaccggatctcaattcaggaaacctccaccggaaacaactcccagc
tcaggtgatgcagtgaaaggaatggacatagattcgcccacgacagtagatgctgaaatg
gaagttgaaggtgccgttggagaggactcacaatcagtttgtgagagtgctgccaaaccc
gatattcaagttatagcggacaagtcaattgctgatagtatggaggcgcttatcggtgct
tatctcatctcctgtggctatgttggtgccttgcgctttctgaagtttcttggtcttaag
gttcttcctgacgatgctgacaggcgcacaatcgaaacatctttagcgaagagcgaagcg
ggttgttacgcaaaattttgggagcagcctgaatcaaatatgacaggagctggcgacaat
gctgctatggctgctcgattggaatccgggttggaaaactttgaagataactccattgga
tatcggttccgttcaaagttgtatctagttgaggccttaacacatgcctcgtaccaccca
aaccgcatcacgccatgctatcaacgactggaattcctaggggacgctgtgttggacttt
ctagtcacgcaacatctctactttcgtcatggtaaattatccccaggtgacctgacggat
attcgccaggccttggtgaacaacaacatctttgcagttattgcagtaaagaaagacttc
aacaagtatctgaaagagatgtcaccaacactgttcaaaatcatcgaaaattttatcact
tttgtagatgatgagaatgaggagagaaagcaaaactactctaatgaggtctctgcagac
cccttcgtcatagtatccgaagaaaatgcagaaggaatagacaccccaaaggtcttgggt
gacattttcgagtctgtagctggtgcggtgtttttggacagcggcatggacctaaccaag
atatggggtgtttactaccgcatgatgaaaccttacattgatcactattctgtgaacata
ccgatgaatcccattagagaaattcacgagaagagtcacaaggttgaatgcagcaaacca
gaagaactccccaacggaaaaatccaatgcactcttcaggtggactggggagagtttgtg
ggtaagggctcaaactctaggatcgcaaaggctaccgctgcaaaactagcattgcaggcg
cgggaaagacagcaagcaagtcaaaaaaacgagtga
DBGET
integrated database retrieval system
