Acropora digitifera (stony coral): 107354983
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Entry
107354983 CDS
T04352
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03013
Nucleocytoplasmic transport
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107354983
09122 Translation
03013 Nucleocytoplasmic transport
107354983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107354983
03041 Spliceosome [BR:
adf03041
]
107354983
Messenger RNA biogenesis [BR:
adf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107354983
Spliceosome [BR:
adf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107354983
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_EML
TRM82_WD
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_SCAP
HCV_NS1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
107354983
NCBI-ProteinID:
XP_015776974
LinkDB
All DBs
Position
Un
AA seq
302 aa
AA seq
DB search
MLQYVLFSITSALAPDATSHSKRPIVLFQGHSGPAYSLISTDKFLISGGSSEIHGWRWDE
ILDKTESPLPAWTLKPPTSRTLDVVESNALVFSSHEETLFSGCGDKNIYMWDLESGNCKG
TLSGHTDYVQCLCLRPKQSQCVSGGEDGTVRLWDYRLKGSMTDMIDPSKNEDTKRPQLGS
WIGCVSVDQTGDWLVCGGGPSLSIWHLRTMTCTSVLNTSSMQQAAVFHDDLILSAGSEPT
VFHWQINGDLKSHVPCTPNSVFSIQVNDKSPNNKVLVVGGSSADIDVFTNFGYKALSLKF
SQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgttacagtatgtccttttcagtattacatctgctttggcaccagatgcaacttcccat
agcaaaagaccaattgtgctgtttcaagggcatagtggtccagcatacagtcttatatca
acagacaagtttctcatcagtggcggatcatctgaaatccacggatggcgttgggatgaa
attcttgataaaacagagtctccattacctgcttggacgttgaaacctccaacaagcaga
acactcgatgttgtagaaagcaatgctttggtcttctccagtcacgaggagacactgttc
tcaggttgtggagataaaaacatctatatgtgggacctggaatcaggaaattgtaaggga
actctctctggtcatacagattatgttcagtgcttatgcctgcgaccaaagcaaagccag
tgtgttagcggaggagaggatggaacagtgagattatgggattaccgattgaaaggatca
atgactgacatgatagatccaagcaaaaatgaggatactaaaagaccacagttaggatct
tggattgggtgtgtctctgttgaccaaacaggagattggctagtttgtggtggtggtccc
tcactttcgatttggcatttacgcactatgacctgtaccagtgttcttaacacatcttcc
atgcaacaagcagctgtgttccatgatgatcttattctctcagctggttcagagccaact
gtcttccactggcagataaacggcgacttgaaatcacatgtaccttgtacgccaaactca
gtattttccatccaagtgaatgacaagtcgccaaataataaggtgcttgtggttggtggc
agttcagctgacattgatgtgtttacaaactttggttataaagctctgtctctaaaattt
tctcagtga
DBGET
integrated database retrieval system