KEGG   Acropora digitifera (stony coral): 107354983
Entry
107354983         CDS       T04352                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03013  Nucleocytoplasmic transport
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107354983
  09122 Translation
   03013 Nucleocytoplasmic transport
    107354983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107354983
   03041 Spliceosome [BR:adf03041]
    107354983
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107354983
Spliceosome [BR:adf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107354983
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 WD40_Gbeta Beta-prop_EML TRM82_WD DSE1_N Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR41 Beta-prop_VPS8 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_SCAP HCV_NS1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st CFAP251_N Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 107354983
NCBI-ProteinID: XP_015776974
LinkDB
Position
Un
AA seq 302 aa
MLQYVLFSITSALAPDATSHSKRPIVLFQGHSGPAYSLISTDKFLISGGSSEIHGWRWDE
ILDKTESPLPAWTLKPPTSRTLDVVESNALVFSSHEETLFSGCGDKNIYMWDLESGNCKG
TLSGHTDYVQCLCLRPKQSQCVSGGEDGTVRLWDYRLKGSMTDMIDPSKNEDTKRPQLGS
WIGCVSVDQTGDWLVCGGGPSLSIWHLRTMTCTSVLNTSSMQQAAVFHDDLILSAGSEPT
VFHWQINGDLKSHVPCTPNSVFSIQVNDKSPNNKVLVVGGSSADIDVFTNFGYKALSLKF
SQ
NT seq 909 nt   +upstreamnt  +downstreamnt
atgttacagtatgtccttttcagtattacatctgctttggcaccagatgcaacttcccat
agcaaaagaccaattgtgctgtttcaagggcatagtggtccagcatacagtcttatatca
acagacaagtttctcatcagtggcggatcatctgaaatccacggatggcgttgggatgaa
attcttgataaaacagagtctccattacctgcttggacgttgaaacctccaacaagcaga
acactcgatgttgtagaaagcaatgctttggtcttctccagtcacgaggagacactgttc
tcaggttgtggagataaaaacatctatatgtgggacctggaatcaggaaattgtaaggga
actctctctggtcatacagattatgttcagtgcttatgcctgcgaccaaagcaaagccag
tgtgttagcggaggagaggatggaacagtgagattatgggattaccgattgaaaggatca
atgactgacatgatagatccaagcaaaaatgaggatactaaaagaccacagttaggatct
tggattgggtgtgtctctgttgaccaaacaggagattggctagtttgtggtggtggtccc
tcactttcgatttggcatttacgcactatgacctgtaccagtgttcttaacacatcttcc
atgcaacaagcagctgtgttccatgatgatcttattctctcagctggttcagagccaact
gtcttccactggcagataaacggcgacttgaaatcacatgtaccttgtacgccaaactca
gtattttccatccaagtgaatgacaagtcgccaaataataaggtgcttgtggttggtggc
agttcagctgacattgatgtgtttacaaactttggttataaagctctgtctctaaaattt
tctcagtga

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