Acropora digitifera (stony coral): 107355092
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Entry
107355092 CDS
T04352
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107355092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107355092
03041 Spliceosome [BR:
adf03041
]
107355092
03036 Chromosome and associated proteins [BR:
adf03036
]
107355092
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107355092
Spliceosome [BR:
adf03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107355092
Complex B
107355092
Complex C
U2 SnRNP specific factors
107355092
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
107355092
TFTC complex
107355092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
GAAD
Motif
Other DBs
NCBI-GeneID:
107355092
NCBI-ProteinID:
XP_015777088
LinkDB
All DBs
Position
Un
AA seq
1214 aa
AA seq
DB search
MHLYALTLQKASSINHAILGNFSGSKQQEIVISRGKIIEILRPDPNTGKVFPLLAMEMFG
VIRDLIAFKLTGGSKDYVVVGSDSGRIVILEYIPSKNTFEKVHQETFGKSGCRRIVPGQY
LAVDPKGRAIMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSHTLVYHVVGVDVGFENP
MFACLEMDYEDADSDPTGEAVHTTQQTLTFYELDLGLNHVVRKYSEPLEEHGNLLISVPG
GNDGPSGVLVCSENYITYKNFGDQADIRMPIPRRKSMFFFLLQTEQGDIFKITLEVDEDM
VTELRMKYFDTVPVATSLCVLKTGFLFTASEFGNHYLYQIAHLGDDDDEPEFSSAMELEE
GTTFFFAPRGLKNLVLVDEIESLAPVMSCQIADLANEDTPQLYAACGRGPRSSMRVLRHG
LEVSEMAVSELPGNPNAVWTVKTHSQDEFDSYIVVSFINATLVLSIGETVEEVTDSGFLG
TTPTLSCSQLGEDALLQVYTDGIRHIRADKRVNEWKTPGKKTIVKCAVNERQVVIALTGG
EIVYFEMDPSGQLNEYTERKEMSSDVQCMALGTVPTGEQRSRFLAIGLSDNTVRVISLDP
QDCLQPLSMQALPATPESLCIVEMAMGGLESESGRLGGLFLNIGLSNGVLLRTVLDMVTG
DLSDTRTRYLGSKAVKLFKIRMHGSDAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASS
FSSEQCPEGIVAISANTLRILALEKLGAVFNQVATPLRYTPRKFVIHPRSNNLIIIESDH
NAFTDTVREEKKQQIAEEMVEAAGDDEKELAAQMAAEFLNEDLAEQQFGAPKAGPGMWAS
LLRMLDPIKGETVDEVRLDQNESAVSVCVCNFNSRPDETYALVGTAKDLTLTPRSCAGGF
IHTYKIAELIDGGYKLEFVHKTEVDDIPGALAPFQGRLLAGVGRLLRIYDLGKKKLLRKC
ENKKLPNFIMGLNSMGTRIVVSDIQESFHFVKYKARENHLVIFADDVNPRTVVIQPLSTR
LKKTIFFKEEKRHFRSHCKDSEIGFFSFFYPQIRLSSSTSDEVDEDPTGTKAFWDRGLLN
GAPQKVETLCNYHVGETVLSLQKATLIPGGSESLVYTTLSGGVGMLVPFTSREDIDFFQH
LEMHLRAEQPSLCGRDHISYRSYYLPVKSVIDGDLCEYFNSLDSSKRRNIAEELDRTPAE
VSKKLEDIRTRYAF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctatgccctaacccttcagaaagcctcaagcatcaatcatgccattctcggc
aatttctcaggttctaaacaacaggagattgtgatctcaaggggaaagatcattgagatc
ttgcgacctgatcccaatactggcaaagtatttcctttgctagctatggaaatgtttggt
gtaatcagagatttaattgcattcaaacttactggaggatcaaaagattatgtggttgtt
ggaagtgattctggaagaattgtcatcttggaatacattccatcaaagaatacttttgaa
aaggttcatcaagaaacatttggcaagagtggatgccgtcgcatcgtgcctggacagtat
ttagctgttgaccctaagggcagggccattatgattggcgctgttgaaaaacaaaagctg
gtgtatattctgaaccgagatgctgcagctcgtctgaccatttcatcaccacttgaagcc
cacaagtcgcacacgttggtctatcatgttgttggtgttgatgttggctttgaaaatccc
atgtttgcttgtttggagatggactatgaagatgctgattctgatcctactggtgaagca
gttcacaccactcaacagaccctcacattttatgagttagatttgggtttgaatcatgtg
gtgcgcaaatacagtgagccacttgaggagcatggcaatttgcttatttctgtacctggt
ggaaatgatggacccagtggtgtactggtttgctccgaaaactacatcacatacaagaat
tttggtgatcaggctgatattcgaatgcccatcccacgcagaaagtccatgttcttcttt
ttattgcaaacagaacaaggagacattttcaaaattaccctggaagtcgatgaagacatg
gttactgaacttcgtatgaagtactttgataccgtaccggtggctacctctttgtgtgtt
ctcaaaactggctttctgtttacagcctctgaatttggaaatcactacttgtatcaaatt
gctcatcttggtgacgatgatgatgagcctgagttctccagtgctatggagctcgaagaa
gggaccacatttttcttcgctcccagaggtcttaagaacttggtgcttgtggatgaaatt
gagagcttagctcctgttatgtcatgtcagattgctgatttagccaatgaagacacacct
cagttgtatgctgcttgtggcagagggcctcgttcctctatgagagttctgaggcacggt
ctagaggtttcagaaatggcagtctctgaacttcccggaaaccctaatgctgtttggacc
gtgaagacgcattcgcaagatgaatttgattcatacatcgtggtgtctttcataaacgcc
accttggttttgtccattggggaaacagttgaagaggttactgatagtgggtttctgggt
accacgcccactctgtcctgttcacaactgggtgaagatgcgctgttgcaggtgtacact
gatggcatccgtcacattcgagctgacaagcgtgtcaatgaatggaaaactccgggaaag
aaaactattgtgaagtgtgctgtgaatgagagacaggttgtgattgcattaactggtgga
gaaattgtttattttgaaatggacccgtctggccaactcaacgagtacacggaacggaag
gaaatgtcttctgacgtgcagtgcatggctctcgggacagttcccacgggagagcagcgc
tcaaggtttcttgccattggtctcagtgacaacaccgtgcgggtgatatcccttgacccg
caagactgtctccaaccactcagtatgcaggctttacccgccacaccagaatcactgtgt
attgtggagatggctatgggtggattggagagtgaatcaggccggttgggagggcttttc
ctcaatattggattatcaaatggagttcttctgaggacagtactggatatggtgactgga
gatctctccgatacaagaacaagatacctcggctccaaagctgtgaagctgtttaaaatt
cgaatgcatggctccgatgcggttctcgccatgtctagtcgttcgtggctgagctactcg
taccaatcccgttttcatctcactccgttatcgtacgaaacattggagtatgcatcgagc
ttctcatccgaacagtgcccagagggcattgttgctatctctgccaacacactaaggatt
ttagctcttgagaagctgggagcagtttttaaccaagtggcaactccactgcgctacaca
cctcgtaaatttgtcattcaccctcgaagtaataatttgatcatcatagaaagcgatcac
aatgcgttcactgacacagtcagggaggagaaaaagcaacaaattgctgaggaaatggtt
gaagcggctggggatgacgagaaggagctggcagctcaaatggctgctgaatttctcaac
gaagatcttgctgaacagcagtttggcgcgccaaaagctggacccggaatgtgggcatcg
cttttgagaatgctagatcccatcaagggtgagactgttgacgaggttcggctggatcaa
aatgaatctgctgtcagcgtgtgcgtgtgtaatttcaacagtcgacctgacgagacgtac
gccttagtcggcactgcaaaggacttgactctgacgccacgatcatgcgcaggaggattc
attcacacctacaaaatagcggagttgattgacggaggatacaaattggaattcgttcac
aagactgaagttgacgatattccaggagcgctcgccccgtttcagggccgtcttttggct
ggtgttggtcgcttgttgagaatttatgatcttggtaaaaagaagctccttcgaaaatgt
gaaaacaagaaacttcccaacttcatcatgggtcttaattcgatgggaactcgcattgtt
gtcagtgacatccaagagtcgttccacttcgtgaagtataaagcgcgggaaaaccattta
gtgatatttgcagacgatgtgaatccaaggacggtggtaattcaacctttatcaactcgt
ttgaaaaaaacaattttttttaaagaagaaaagcgacattttcgcagtcattgtaaagat
agtgaaatcggatttttttcttttttttatccgcagattcgcctctcctctagcacaagc
gacgaagtagatgaagatcctacaggaacaaaagcattctgggataggggccttttaaat
ggtgctcctcaaaaggttgagactctgtgtaattatcacgtgggtgaaacagtcctatcg
ctgcagaaagctactcttatccctggtgggtcagagtcactggtttacactacgctctca
ggaggtgtcggtatgctggtaccatttacgtcgagagaggatatcgacttcttccagcat
ctcgagatgcacttgcgcgccgaacagccatcactttgtggcagagatcatatatcgtac
agatcctactacttgccagtcaaaagcgtgattgatggcgatttgtgtgaatattttaat
tcgctggattcatcgaaacgacgcaacatcgcggaagaactggatcgaactcctgctgag
gtttccaagaaactggaagatatcagaacgcgatacgctttctag
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integrated database retrieval system
