KEGG   Acropora digitifera (stony coral): 107356199
Entry
107356199         CDS       T04352                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
adf  Acropora digitifera (stony coral)
Pathway
adf03013  Nucleocytoplasmic transport
adf03015  mRNA surveillance pathway
adf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107356199
  09122 Translation
   03013 Nucleocytoplasmic transport
    107356199
   03015 mRNA surveillance pathway
    107356199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adf03019]
    107356199
   03041 Spliceosome [BR:adf03041]
    107356199
Messenger RNA biogenesis [BR:adf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107356199
    TREX complex
     107356199
Spliceosome [BR:adf03041]
 Complex C
  Other components
   EJC/TREX
    107356199
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107356199
SSDB
Motif
Pfam: FoP_duplication FYTT
Other DBs
NCBI-GeneID: 107356199
NCBI-ProteinID: XP_015778355
LinkDB
Position
Un
AA seq 180 aa
MEWKSDKVDMSLDDIIKLNKKGNRGRRGGRGRPTRGGGGAGGRVRGGRINKNRPMPYSRP
KQLPDKWQHDLFDGDSGFRGGRTRGGGISTGCKLSISNLDFGVSDSDIQVIKPSSSCIFL
NRRRQPSGGRGGSRGGRGRGRGRGRGGRGGGTQRTNVTAEDLDAELDAYHDAGDVDMADD
NT seq 543 nt   +upstreamnt  +downstreamnt
atggaatggaaaagcgacaaagtcgatatgtctttggacgatatcataaaattgaacaag
aaaggtaacagagggcgaagagggggacgtggaaggccaactagaggcggcggtggtgct
ggaggaagagttcgtggcggcagaataaacaagaaccgaccgatgccatattcgaggcct
aagcaattaccagacaaatggcagcatgatctttttgacggtgatagcggtttccgaggc
ggtagaactcgtggaggcggaatttcgacaggctgtaaactttccatctcaaatctagat
ttcggtgtttctgattccgatatccaggtaataaaaccatcaagttcttgcatatttctg
aacagaagacgacaaccttctggaggcagaggtggaagtcgtgggggaagaggaagaggg
cgtggtagaggaagaggaggaaggggtggcggcacacaaagaacaaatgtcactgcagaa
gatcttgatgccgaactggatgcttaccatgacgcgggagatgtcgatatggcagatgac
tga

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