Acropora digitifera (stony coral): 107356340
Help
Entry
107356340 CDS
T04352
Name
(RefSeq) laminin-like protein epi-1
KO
K05636
laminin, beta 1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107356340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_G_2
Laminin_G_1
EGF_LMN_ATRN
C1q
Motif
Other DBs
NCBI-GeneID:
107356340
NCBI-ProteinID:
XP_015778445
LinkDB
All DBs
Position
Un
AA seq
1777 aa
AA seq
DB search
MFVQGRQCDRCIAGYYRLAVENPHGCLACDCHLNGTINRTSDCLDNYSGQCRCKPNVVLR
DCSKCKDDYYDLQDSDINGCKFCDCDTGGTKTSHSCDKVTGACACHPHIVGRKCDAIEVG
FYYPDAHFISAAKSPYKTATETLSVVLDIPKTGNFSLLVHHANTGRQEVEVQIIVQYKNV
SHHAPQREEIYNFSQSFPADNQTTKIITGYPSEYLLLKKGLWLINMTTTQPQGGLKLDRV
VAIPKEFQEPTVLRKEDISQFQFCDVESNDMSALPCLRMFFTIATNYLQGALACSCHPLG
SNSSLCQSYGGQCNCKPGVEGRDCDRCKPGFYNLTDEGCTPCECNGPNKICDATSGMCEC
PENTTGRNCLPCQCNNNTNKCLRTGECVECQFNTTGFSCQHCAQGYFGDAVNQRCSACAC
NEVGSVDQQCNRETGQCNCRTKITGRNCSVCQTNTFGFGRQGCRKCECNSYGSANMQCSE
SGQCSCLANVTGLKCTQCPLGFYGLPTNPCQECNCNAIGAISSTACVNDNFGQCHCKHGV
TGRECNRCMKYFTSLSDAGCSGCSRCIQSLRHSMLDTAKNTNGTEVSFQVLKEFSKLNAP
RMETASLMEQAQTDKQQFYERIAAGNQLHHELTTLSTTQTNRNLLEINAMAQYVRSLSTD
VAVNSTDILEEVKSTKNKTSQIQRYLTSVDDIIGDIRTALFENSVTASQAMLESMEALTT
TERNFTKHFQAVADIMKVIENHTIRTEETLRRIFSQRALAHEMQHKVKEKDTIVTKVQDF
HNQSHDKFKADVEHVYNHSRAMEATLMETMKILEQELLVLNRSQSLLVDTNLTITNALLH
LARGEAVFEDLFHVNNALTNVSNVLKKEIGETQHRLRNVTVDLIRAQTHTLNLETLARQI
EETFNLSHSHASQAMLAIEDYEMIHETVNKALKLVKQANSTLVNITEEFSMLLSADLQQK
AEMIFKDLHDLSNDTARRNYSLQSLKMAVYEVNETFVDFLAVRNEINETFPSFYNDSMRY
LSAAAFAPEVFISLSDVQNQIKKSIGIIAYLEEHLSQTESVVVELLQKVALMRNMSKDGV
TLINDSLANVNNVTKQLAPNPVEPAVNATVREAKSVMNSLSSLRNQTESKINNASALLQR
MQHLVGSIPFAFRIENDSSIMLVPTSSLFESPHTSEISVDIKTYSSEGMLLFIAADQHNL
TKGRAGETENSLGLYLSNNSVHLVLNLGSGPITTYNPLELKNDTWYNIYVIRTKSVASLT
VSGDIHERETVTMNISSVSGENILQLTNQSAIYVAGFPRNMTILQHVDHFSGVIDNLVVD
NTPYNLWNPREAHGSGRLYASPRYKRLFYPSDGKAVSFFGNGYVQHALSQINSTFLHAEV
ELEFRTLHYNGVIMTISSDQLQHHVVLYLQNGQVNLYFESGITLKSTGSSYANGRWYLVR
VVRTNMKATLSIRPAGSSETSDSRSVSAEMTSMTRDYLITFGDLPPNSPRSFVMADVFSG
DIKNLRVFSDKSGTLVPRAFSDPLLLIAKQSVSFKGIIRGPIEYGFRFYGYQEDSGECSH
AATIQSSEHEVLTSLIFTFKIEAESGVLLYKRHGETFSLLMLILHGDLLMWLGDVKSSPV
FSSSDGAFSDNSWRVLRFALTADRYSLYVNESLLHSGAYDFTKSPILVHKPFYFGGVPRN
LSSQVPYSLCFRGGMKDLLINSRSVSFLSVHTLGVSNAGVIPAFVPPPVPKTCVAPLDPG
SLITDAKKIHFGLFESKGESYVGFNLHGKQSEIFRSK
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgcaagggcgtcaatgcgacagatgcatagcgggatactacagactggctgtg
gagaaccctcacggatgtcttgcttgtgattgtcatcttaatggaaccataaatcgtaca
agcgattgtctggacaattacagtgggcagtgcagatgtaaaccaaacgtcgttctacga
gactgcagcaagtgtaaggatgattattacgatcttcaggactctgatattaatggctgt
aaattttgtgactgtgatactgggggtacaaagactagccacagctgtgacaaagtgaca
ggtgcctgcgcttgccatccccatatagttggacgaaagtgtgacgcaattgaagttgga
ttttactacccagatgcacactttatttcagcagcaaagagtccttacaaaacggcaacg
gaaaccctgagtgtagttctagatattccaaagactggcaactttagtctgctggtacat
cacgcaaacactggaagacaagaagtggaggttcagataatcgttcagtacaaaaacgtg
tctcaccacgctccacagagagaggagatctataacttctcacaatcttttcctgccgac
aatcaaacaaccaagatcatcactggatatcctagcgagtacttgctgttaaaaaaggga
ctctggctgattaatatgaccacgacacagcctcaaggaggactgaaactagatcgcgtt
gtagcaattcccaaagaatttcaagaacctacagtgcttcgaaaagaagacatttcacag
tttcagttttgtgacgttgaatcaaatgacatgagtgcattgccatgcctgaggatgttc
tttacaatagcaacgaactatctccaaggagcgctagcttgtagctgtcatcccttggga
tcaaacagctcattatgtcaatcttatggaggacagtgtaactgtaaacctggagtggaa
ggtcgtgattgtgatagatgcaaaccaggcttttacaatctcactgatgaaggatgtaca
ccatgcgaatgtaatggacccaacaaaatctgcgacgcgacttctggcatgtgtgaatgt
cctgaaaatacaactggtcggaactgcctaccctgccaatgtaacaacaatacaaataag
tgcctcagaacaggagagtgtgttgaatgccagttcaacaccactggcttctcctgccag
cattgtgctcaaggatattttggagatgcagttaaccagcggtgttcggcatgtgcatgt
aatgaagttggttctgtggatcaacaatgcaaccgagaaaccggccagtgcaactgtaga
actaagataacaggcagaaactgtagtgtgtgtcagaccaacacttttggttttggccga
caaggatgtcgtaagtgtgaatgcaactcttacggctcagcgaatatgcagtgctctgaa
agtggtcaatgttcatgcctggctaatgttacaggattgaaatgcacgcaatgccctcta
ggattttatggacttccaaccaatccgtgccaagagtgcaactgcaacgcgattggtgcg
attagtagtacagcgtgtgtgaacgacaattttgggcagtgccattgtaaacatggtgtt
actggaagagagtgcaaccgctgtatgaagtatttcacaagcctttcagacgctggatgt
tcaggatgttctcggtgcatacagagtctacgacactcaatgctcgatacggcgaaaaac
acaaatggaacggaagtatcttttcaggtgctgaaggaattttcaaagttgaatgcacca
cgtatggaaacggcgagccttatggaacaggctcagaccgacaagcagcagttttatgaa
aggatagcggcaggtaaccaacttcaccacgaacttaccacattgagcaccactcaaaca
aacaggaacctacttgaaatcaacgcaatggctcaatatgtccgaagcttgtctacagat
gtggcagtgaactctaccgatatattggaagaagttaaaagtaccaagaataaaacatca
cagatccaacgttatttgacgtccgtcgatgatataattggcgatattcgaactgcctta
tttgagaacagcgttaccgcgtcacaagcaatgttagaatcaatggaggcattgacgaca
actgaaaggaacttcacaaagcattttcaagcagttgccgacattatgaaagttattgaa
aaccatactattcgcactgaggaaacgcttagaaggatattttctcagcgcgcccttgct
catgaaatgcaacataaagtcaaggaaaaagatacaattgttacaaaggttcaagacttt
cataaccaatcgcatgacaagttcaaggcagacgtagaacacgtttataaccattcacga
gctatggaggcgaccctaatggaaaccatgaaaattttagagcaagaactactggtcttg
aatagaagtcagtctttattagtagacacaaatttaaccataacaaatgcactgttacat
ctggctcgaggggaagctgtatttgaggatcttttccacgtaaacaacgctctgacaaac
gtttccaacgtactgaagaaagaaattggtgaaacacagcacagacttagaaatgttaca
gttgacttaatacgagcccaaactcacacattaaacctggagacactagctcgacaaatt
gaagagacgtttaacctgagccactctcatgcctctcaagcgatgctggccattgaagat
tatgaaatgatacacgagacggtgaacaaagcattgaagcttgttaaacaagccaacagt
actctggtcaacataacagaagagttcagcatgctattatcagctgacctacaacaaaag
gctgagatgattttcaaagatttgcacgatctctccaacgatacagcgaggagaaactat
tcgttgcagagtttgaaaatggctgtttatgaggtgaatgaaactttcgtggatttcctt
gcagtgcggaatgagattaatgaaactttcccgtccttttacaatgactcaatgagatat
ttgtcagctgctgcctttgcacccgaggtgttcatttccctctctgatgtacagaatcaa
ataaaaaaatcaattggaattatagcttatctagaggagcatctcagtcagacggaaagt
gttgttgttgaactactgcaaaaggttgctttaatgagaaacatgtccaaggacggagtg
acattgattaatgactcccttgccaatgtaaacaacgtcaccaagcagctagcgccaaac
ccagttgaacctgcggtgaatgcaacagtgagagaagcaaaatcagtcatgaattcacta
tcctctctgagaaaccagactgaatccaaaattaacaatgcgtcagccttacttcagaga
atgcagcacttggtaggttcgatcccattcgcttttcgcattgaaaacgatagctcgatt
atgctggttccgacgagcagcttatttgaaagtcctcatacgagtgagatctcagtagat
atcaagacttacagcagcgaaggcatgttgcttttcattgcagcagaccaacacaatttg
actaaggggagagctggagaaacggaaaacagccttggattgtacttatccaacaattct
gttcaccttgtacttaaccttggaagtggaccaatcactacctacaatcctctcgaactc
aagaatgatacttggtacaacatatatgtcattagaactaaaagcgtggcatccttaaca
gtcagtggtgacattcacgaaagagaaacggtgacaatgaatatttcatcagtcagtgga
gaaaacattcttcagttgacaaaccaaagtgctatttatgtggctggatttcctcgtaat
atgacgatattacagcacgtagatcattttagtggggtcatcgataacctagttgtagac
aatacaccatacaatctctggaatccgcgagaagctcacggtagtggaaggttgtacgct
tcacctcgttacaaaagattgttctatccaagcgatggaaaggctgtcagtttctttggg
aatggttatgtccaacatgcgttgagccagatcaacagcaccttcctgcatgcagaggta
gagttggagtttaggaccttgcattacaacggtgtcattatgacaatttcaagtgatcaa
ctgcaacatcacgttgtcctttatcttcaaaacggacaagttaacctctattttgaatcc
ggaatcaccttgaaaagtaccggttcttcctatgcaaatggtcgttggtatctcgttcgt
gttgtacgtactaatatgaaggcaacgttgtctataaggccagcaggatcatcagagaca
tctgacagccgatctgtgtccgctgaaatgacgtcgatgaccagagattacctgattaca
tttggagatctacccccaaatagtcccaggtcgtttgtgatggctgatgtgttttctggc
gacatcaagaacttacgtgtgtttagtgacaagtctggtaccctggtaccgcgagcgttc
agtgatccattactattgatagctaaacaaagcgtgtctttcaaaggaataatcagggga
ccgatcgaatatggttttcgtttctatggttaccaagaagattcaggagaatgttcccat
gcagctacaattcaaagcagtgagcatgaagttcttacctctctgatattcacgttcaag
attgaagcggaaagtggagtgcttctgtacaagagacatggcgaaaccttttccttgctc
atgttaatacttcacggagacttgctgatgtggttgggcgatgttaaatcatctccagtc
ttctcttcgtccgacggcgcattttccgataactcgtggcgtgtccttcgctttgcctta
actgcagatcgatacagtctgtacgtaaacgaatcgctcctgcattcaggtgcatatgac
tttaccaaatccccaatacttgttcacaagccattttactttgggggtgtcccacgaaat
ctttcttctcaagtgccatattcattgtgctttcgcggaggaatgaaagacttgcttatc
aattcaagatctgttagcttcttgtctgtacacacgttaggtgtatcaaatgcgggagtc
attccagcctttgtacctcctccagtccccaagacgtgtgtggcccctctagacccagga
agcttgatcaccgatgcaaaaaagatacattttggccttttcgaaagtaaaggagaaagt
tacgtcgggttcaatttgcatgggaagcaaagtgaaatcttcaggtctaagtaa
DBGET
integrated database retrieval system