Acropora digitifera (stony coral): 107356392
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Entry
107356392 CDS
T04352
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
adf
Acropora digitifera (stony coral)
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
adf04040
]
107356392
04091 Lectins [BR:
adf04091
]
107356392
Ion channels [BR:
adf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107356392
Lectins [BR:
adf04091
]
C-Type lectins
Others
107356392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
Polycystin_dom
PKD_channel
PLAT
PKD
PKD_4
Ion_trans
GPS
WSC
Motif
Other DBs
NCBI-GeneID:
107356392
NCBI-ProteinID:
XP_015778496
LinkDB
All DBs
Position
Un
AA seq
3115 aa
AA seq
DB search
MECCWNFLRKFCQVLILFQFISPHIKAKNIQLPPETEADLHLGCLQLQNNHTSFNQPVVN
ATSPYKCAQACAKKKLPLAAVFNSTACHCLNNTFALNVSNISCAGSQLRIFQVYNTSSFM
VVFAELYQKLFILLPPNIAQSPSGNLTQLNGKARNLSDIVEYSIDFGDRRVKTVFNESVK
KNKTVHRYVTKGEFNVTLMKSSGNSSKAISFRTIKVFIPHNVTDMKCHNTFPGKAILCTV
SGTTGSDVTVRLQMGKIGQNTTLTVPDPPRFELGNHQFRSIKEPLRGDAGPGTYILQSLE
PLAEILVEAWELYAEKPGHIRLQVYRAQWNKTSCNTTTQLLYSCQNMPSVNSSCDRMCFN
IEYDKQKEPIGSCAHMLVNYSTVHTMDVNLTEGYNLIIIPEEKRFPSQIGDIFGFQRSVS
GAVLERVTTGQSARVYHAKEQFSPELGVFFADTVALNFSFRVQVHGSIFSKAFMNVSCAY
TVGVYPLMAVMRNVILPTHNRKPFKIEIEIAVQNRISNASTKNNIYIAVNVSKNITVTIA
QGTNITCEWRMWNSSSPTYQTPHMQKNTTTEGVSCSIELPATAQPVSFPVHFTAFNGVSN
CSNCPITIKVHVREIIEGLTVEKCNRGSFAYKKARLCLTTRVAHGTHVWCNWQVKKPKGT
HGITKSIGKKINPVISPVGNTSITVNCYNGLPQVGRTTFSIKTIPSPLSFDAPRWVAVNE
EIQINCRVSWPGGSSKIFFAEQGLTGQNGTEIGQKPLLELSVSPWQQYRDNGSVTLTINV
IRDRKVTCKAVHFPDLNMDYTIRAMNPIAGVNITTNCTSRFEVATSCEFQVQITGGENPH
FQWNVSEKGGDVNVLKYTGRTFNHRFRNPSEVSVSVNVSNEVSWMAKTIHFVAVHSVPLI
RKAELRHTKSGFVDYAIVFSVAHLEQPYLCRFLWDWDDQSELQEASSLLTHTYNRTGQYN
VAVKISTGIDNVVLSSVVVVRQPITVLQIRDIALGLSKVLTVKFEIFQSLNATYAVDFGD
NSGTIKGFVSKSPHVELLKHQYKTLGTYLLIISSINVLGSQTSAQKSVTITESHCIINDL
RMSGAGADSDNCPEIKQDYEYSLHSSIKVDCPGAEDFIYEWRVQQVLRYSKTVNVPFTKE
VSSNFLFLSAHSLKGGLYKFTLTVTATPLGISKATIGYLRVRMPKLLATIDCGSKREMPW
NQDIVLNGSRSSDPNDIDSSSAHSLLSFQWFCGPNRDTSCFQGMINDTQPVLRFPKGFLN
RTTTYQFVLLVTKESREAETSQTIAVRDGNFKPLCIRCMGNCAHRLTTSTELVLRSEGCI
SHNETKRSCQWELHGQAYSELIRVSNSSLFKLNPETLTPNQTYTVVFKDNSGVTSRYSVV
TNIPPKGGSCIVSPSEGIVIETQFQITCTGWEDEDSPLWYEFFLRDPASRPMLLFYGPLP
YSDPLFLPPGREEDNFHLELFVNIWDALGTRKEFPLRVKVTSFSPNAGPISSILKGLVTG
PNSMLKNLLMRGEFRRATQLLNTVITVLNQDSSQVPKSDPADMANSVEVRGRVIQDLSRM
CCSSAQGIRQALVGLLRATEVTGELSPNALEDGANGLSNMAENLVAKFKGTRAENMTKDI
LNGLSHVIEGSVAMSNHAKLEQGSDEIKDWIDDSNEARNKYQQAKSEKATNKSLEGIDYV
ARKLLDYQIIGDSPSHVTSDLMTLTVSRQCPSDISDAALNSGLVVFRIPSELKHVKLDGF
DVVNTKVVSMSQSPFISSSALSMDTPVSTLELLEASGKEIEIKNLSEPISVFLGVNQSES
DDLKTISDVISFTDNITFFKFEPGEENSLYFVINCSGILRPGETMVVIGKRNSRPSNENF
DLSWNLSSCSLTLDKLLPREYLNGSEEFYLGLKLLKDGNVTNSSTEASKIMYSVLVKAIG
CYYWNENMQAWKRDGCEVGNKTTLESIHCQCNHLTWFGSRVFVPPNSLNLDKIAVMIVDP
SNYIPVLTVLSVTSGLYLLVLVWARREDRKDIQKVGASVSPSNKAEDTYAYEVIISTGMR
RHAGTTANIAMTMTGEHGESHPFLLKSSHWTTLARGSVNSFLVTTSESLGEISYVRVWHD
NFGDDPAWYLKQICIREIAVNRVWHFICERWLAIDEGDGLIDRILTLTSHEEMKEFRHLF
LTKTYKDLTDSHLWFSVVWRPPQSPFTRVQRVSCCFSLLLCTMMANAMWYEAEKRSYTAV
RLGSLKFSWEQVFIGVCSSLIVFPINLILVQIFRHCGRRPAKEQKLYCKPIGRTSSTETV
TTRVQSPSPQGCTIGLNCSADRYHKLNQVSPSGSPTCPASSVSELRLVSAKRFTHDFPSH
PAKLGVTVNLTDSTSDVRSLLQNDSRASSPTETASPSQVKVFPKDKQLPWWFVYVGWVLV
IVTSLVAGSVTLLYGIEFGLQKSSRWLLSMFFSVTQDILVSQPLKVVGLAIFFALIFKKN
NKSNLFLPFNDYARDQLPTTTRNLGQEHAVAPTVKVPTETILQLAREKAAKERAMHAILL
DFGTYILFTLIVLLIAYGIRDQDSFHQNNAVVKVVLSHNFYNHSEGSEPQVFSEILRPRD
MWDWTEQALLPSLYNLPSYFYTGRAPRFMEGEIGLVVGVARLRQHRVKKDSCSVVPMVKD
YFSRCVDDYYEAKEDHQAYTEGWKLPANNTGFPSLLATQGPWCYSTADELKGYAYKGEVK
TYSGGGYVLELSHIYYKAQRQIKDARSKLWMDRFTRSVFTEFNLYNPNINLFSAVTLLLE
RPPTGGLLPRVEVLAYRLYRYVGDFQLFILACEVLFLVFVLYFTYREAKKVHKMRLAYIM
ESSNLLELVTLILSWTSIGYYFVWLGLRKWTLKLYHDNPTKFISFQYLSAWQLTFEGVVG
LTVFVTCLKFIKLFRFNRRIFLLSCTLRQAGGELLPYFIVFMINFLAFAQVYHILLASEY
DSFRTLIGSMQKLLSALLGKFNIAEMMSAYRVLTAVIFIVYMIITNFLFLNVLIVIIIDS
FAVVKQQNDEMQNEFELLEYVTERIRGVLGIRKLNKITGTHEFRNSNIESEHEQGSDLGE
NITQEDQLNIAELLEEALDKLDAKLNEMKNTINDDMLCYYASHRIPGYHIVKQVQ
NT seq
9348 nt
NT seq
+upstream
nt +downstream
nt
atggagtgctgttggaatttccttcggaaattctgtcaagttctcattttatttcagttt
atttcgccgcacataaaggcaaagaacatccagctaccaccagaaacagaagctgacttg
catttgggttgtttacagctacaaaacaaccacacaagttttaaccagcctgttgtaaat
gcaacttctccatacaagtgtgctcaagcatgcgcaaaaaagaaattaccgctggcagca
gtattcaacagtacagcgtgtcactgcttaaacaacactttcgccttgaatgtcagtaac
atatcctgcgcaggctctcaattaagaattttccaagtgtacaacacaagttcctttatg
gtggtgtttgctgaactgtatcaaaagcttttcatcttacttccacccaacatagcccaa
tcaccttctggaaacctcacccaactaaacggaaaagcaagaaacttgtcagacatagtc
gagtattcgatagactttggcgatcggcgagttaagacagtgttcaatgaatcagtcaag
aaaaataaaacagttcatcgatacgtcacgaaaggcgaatttaacgtcactttaatgaaa
tccagtggaaactcatctaaagctatttcatttcgaaccataaaggtgttcataccccac
aatgtaacagatatgaagtgtcacaatacttttcccgggaaagcaattttgtgtaccgtg
agcggaacaacaggtagtgacgtcacagtaagactacaaatgggaaaaataggccagaac
accactttgacggttccagatccaccaagatttgagcttggtaatcatcaatttcgttcg
atcaaggaaccacttagaggcgatgccggacccggaacatacattcttcaaagccttgag
cccctcgcagaaatattggtggaggcctgggaactatacgctgagaaacctggtcacatt
cgactccaagtttacagggctcagtggaacaaaacctcctgcaacacaaccacgcagttg
ttatactcttgtcaaaacatgccttccgtcaacagcagttgcgatcggatgtgcttcaac
atagaatacgataagcagaaggagcctattggatcatgcgcacatatgctagtgaattat
tccacagtacacacaatggatgtgaacttaactgagggatacaacttgatcattataccg
gaagagaaaaggtttccgtcacagataggagacatatttggatttcaaaggagtgtttct
ggtgctgttcttgagagagtaaccactggacagtctgcaagagtttatcacgcaaaagaa
caattttctccggagttgggcgtgttctttgcagacaccgttgccttgaatttttctttt
cgagtgcaagtgcacggttcgatattttctaaagcatttatgaacgtctcgtgtgcatat
accgttggagtgtacccacttatggcggtgatgaggaatgtgattctcccaacacataac
agaaaaccatttaagattgaaatcgaaattgctgtgcaaaatcgcatttcgaacgcatcg
acgaagaataacatatacattgctgtgaacgtgtcaaagaatataacagtgactattgct
caaggtacaaatataacatgtgaatggaggatgtggaattccagttcgccaacgtaccag
acacctcatatgcagaaaaataccaccacggaaggggtatcttgcagcatagaacttcct
gcaacggcacaaccagtttctttcccagtccatttcacagcatttaacggtgtttcaaat
tgctccaattgccccattactattaaggtacacgttcgggagatcatcgaaggcctcacg
gtggagaagtgtaaccgcggctcatttgcttacaagaaagccaggttgtgcttgacaaca
agagtggcacatggcacccacgtttggtgcaactggcaggtcaagaagcccaaggggacc
catgggattacaaaaagtatcggcaagaaaattaatcctgtgatttcaccagtcggaaac
actagtataactgtcaattgctataacggattaccccaagtggggcggacaaccttttcg
atcaagacgatccccagtccactttcatttgacgccccgcgatgggtggcagtgaatgaa
gagatacagatcaattgtagagtttcttggcccggtggatcaagtaaaatttttttcgca
gaacaggggttaacagggcaaaacggaaccgaaataggacaaaagcctcttttggaatta
agcgtctctccatggcaacagtaccgcgataatggatcagtgactttaacaatcaatgtg
attagggatcgaaaggttacttgcaaggcagttcattttcctgacttgaacatggactac
actattagagcaatgaaccccattgcaggagtcaacatcaccacgaattgtacctcgcgg
tttgaggttgctacgagctgtgagttccaagttcagatcaccggaggagaaaatccacac
ttccagtggaatgtgtcagagaaaggaggtgacgtaaatgttttgaaatacacaggacgt
acattcaatcatcggtttcgaaaccccagcgaagtgagcgtttccgtaaatgtcagcaac
gaggtgtcttggatggcaaaaaccatccactttgtcgccgtgcattctgttcctttgata
aggaaagcggaacttcgtcacacaaaaagtggattcgtagattacgcaatcgtgttttcg
gttgctcaccttgaacaaccctacttgtgtcgcttcctctgggactgggacgatcaatcg
gagttacaagaggctagttcattgttgactcacacttacaatagaacgggtcaatataac
gttgccgtaaaaatttcaactggaattgacaacgtcgtattatccagtgtcgttgtcgtt
cggcagccaatcacggtcttacaaatccgtgacatagcacttggcttatcgaaagtcctc
acggtgaagtttgaaatttttcaaagccttaatgcaacatatgcggtagactttggcgac
aattcagggacgatcaaaggatttgtatcgaagtcgcctcacgtcgaattactgaaacac
caatacaagacattaggcacgtacctcctgatcatatcttccataaacgtcctcggttcg
caaacctctgctcagaagtcagttaccatcactgaaagccactgcataataaacgacctg
cgcatgtccggagctggagcggacagcgataactgccctgaaattaaacaagattacgaa
tactcacttcactcgtcaatcaaagtagactgtcctggtgctgaagacttcatctatgag
tggagggttcaacaagtcttgcgctactccaaaactgtgaatgtaccgtttacaaaagaa
gtttcctccaatttcttgtttctctccgctcactctctaaaagggggtttgtacaaattt
actctcactgttacagcgacgccacttgggatatcaaaagccaccataggatatctgcgt
gtacgcatgccaaaactactggccacaatagactgcggaagcaaaagagagatgccatgg
aatcaagatattgtgctaaatggatctcgatcgagcgatccaaacgatatagattccagt
tctgctcactctcttctttcatttcagtggttctgtggtccgaatcgtgatacttcgtgt
tttcaaggaatgattaacgacacacaaccagttctgagatttcccaaaggtttccttaat
cgtaccaccacttatcagtttgttcttttggtaacaaaagaatcgagagaagcggagact
agtcaaaccatagcagttagggatggaaactttaaacccctttgtatcaggtgcatggga
aactgtgcgcacaggttgacaacatccacagaactcgtgttacgaagtgagggatgcatc
agccataacgaaaccaaaagatcatgtcaatgggagctacacgggcaagcgtactctgag
ttaatcagagtttcaaattcgagcctgttcaagttaaaccctgagactttaactcccaac
caaacatataccgttgtttttaaagacaacagtggtgtaacaagtcggtactcggtagta
accaacatacctccgaaaggtggatcgtgcatcgtgtcaccatcggaaggcatcgtcatt
gaaacacaattccagataacctgcacggggtgggaagatgaggacagtcctctgtggtac
gagtttttcttaagagatcctgcatcgagacctatgttgttgttttatggtccgttacca
tattctgaccccctatttcttcctcctggacgggaagaagacaactttcatttagaactc
tttgtgaacatatgggatgctttgggaacgcgcaaagaatttcctcttcgagttaaggtg
acaagctttagtcccaatgcagggcctattagttctattctaaaaggactggttacgggt
cccaactctatgttgaagaatcttctcatgagaggagagtttcggcgggcaactcaactt
ttgaacaccgtcatcaccgtcttaaatcaagactcgtctcaggtccccaagtctgatcct
gcggacatggcgaacagtgtagaggttcgtggcagagttatccaagacctttcccggatg
tgctgcagcagcgctcaagggatcagacaagccttggttggactccttcgagccactgaa
gtaactggtgaactctcaccaaatgcccttgaggacggagcgaacggcttgtcgaacatg
gctgagaacttagttgccaaatttaagggtactcgagccgaaaacatgaccaaggatatt
ctcaatggattgagtcacgtgattgagggttctgtcgccatgagcaaccacgccaaatta
gagcaaggctccgatgaaatcaaagattggattgacgatagcaacgaggccagaaacaaa
taccagcaagctaagagcgagaaagcaactaataaatccctggaaggcattgattacgtc
gcacggaaactgctggactatcaaataataggagattctccaagtcacgtgacgtcggat
ctgatgacattgaccgtttcgcgacagtgtcctagcgacataagtgacgcagctttaaac
agtggactggtggtatttcgaatcccatcagagttgaagcatgtcaaacttgacgggttt
gacgtagtgaacactaaggtggttagcatgtcgcaaagcccgtttatttcaagcagtgct
ctctccatggatacaccagtctcgactctggagctcctggaagcctcaggaaaggaaata
gaaatcaagaacctcagcgagcccatctcagtattcttaggagtcaaccaatcagagagc
gacgatttgaaaaccatatctgatgtcatttcattcacggacaatattacgtttttcaaa
tttgaaccaggggaagagaactcattgtattttgtgattaactgttctggaatcctgaga
cctggggaaacgatggttgtaatcggaaagagaaattcaaggccgtctaacgagaatttt
gatctttcgtggaatctgtcttcgtgcagcctcaccttagacaagcttctgcctcgagaa
tatttgaacggttcggaggagttctatttgggattgaaactattaaaagatggaaacgtg
accaatagttccactgaggcgagtaagatcatgtacagtgtgttagtgaaggctattggc
tgctactattggaacgagaacatgcaagcatggaaaagagacggatgtgaggttggaaac
aagactacactggaaagcattcactgtcaatgcaatcacttgacttggttcggaagccgt
gtgtttgtgcctcctaactctttgaatttagataaaatagcagtaatgatagtcgatcca
tcaaactacattccagtgctaactgtgctctccgtcacatctggtctgtacttgctagtt
ttggtttgggcaagacgtgaggacagaaaagacatacagaaggtgggagcatccgttagt
ccgagtaacaaagccgaagacacctatgcctatgaggtcattatcagtactggcatgcgc
agacatgcaggcacaacggccaacattgccatgacaatgacaggagagcatggagagagt
cacccatttctattgaagagcagtcattggacaacattggctcgaggaagtgtcaattct
tttctggtgacaacatcggaatccctcggcgaaatctcatacgttcgggtgtggcacgac
aacttcggtgatgaccccgcctggtatttgaaacaaatatgcattcgtgagattgcagta
aatcgcgtgtggcactttatttgtgaacgttggctagcaattgacgaaggtgacggtttg
attgatagaatactcacgcttacgagccacgaggaaatgaaagaatttcgacatttgttt
ttaacgaaaacgtacaaggacctgaccgattctcatctttggttttcggttgtttggaga
cctccacagtctccattcacgagagtgcagcgtgtgtcttgctgtttctcccttcttctg
tgcactatgatggcgaacgccatgtggtacgaggcggaaaagagaagttacactgctgtc
cggttgggttctttaaaattttcatgggagcaagttttcattggagtatgcagcagtttg
attgtgtttcctatcaatctgattctagtgcaaattttcaggcattgcggtcggaggcca
gcgaaagagcaaaagctttactgcaaacctataggtcgcacgtcgtctactgagactgtc
accaccagggttcagtcaccatcaccacaaggctgtactattggtctcaactgttcagct
gatcgttaccataagttaaatcaagtatctccatcaggatctccgacttgcccagcttca
agcgtgagtgaactacggctagtgtctgcgaagcgattcactcacgattttccatcacat
cccgcaaagttaggagtcactgtcaatctcacggattcaaccagtgatgtgagatcatta
ttgcaaaacgactcgagagctagctcacccactgaaaccgcatccccatcacaggtaaaa
gtctttccaaaagacaaacaactgccttggtggtttgtatatgttggttgggtactcgtc
atagtgacctccctggtcgctggatcagtcacgctcctgtacggtatcgagtttggctta
caaaagtcaagccggtggcttttgtccatgtttttctctgtcacgcaagatatccttgtc
agccaacctctgaaagttgttggcctagcaatcttcttcgccttgattttcaaaaaaaac
aacaaaagcaacctttttctaccgtttaatgattacgcacgtgatcagcttccaaccacc
acaaggaaccttggacaagaacatgccgtggccccgactgtgaaagtgcctacagagacc
atcctacagctggctcgagagaaggctgccaaagagagagcgatgcacgccattttactt
gattttggcacctacattttgtttacactgattgtcctccttattgcgtatggaatccgt
gatcaggactcttttcatcaaaacaacgcagttgtcaaggttgtacttagtcacaatttc
tacaaccactcagaaggttccgaaccacaagttttctccgagattttgcgaccgagagac
atgtgggactggacagagcaagcattgttgccctccctgtacaacctgccgtcttacttc
tacacaggaagggcacccaggttcatggaaggtgagatcggactggtggtgggtgtagca
cgcctgcggcaacacagggtcaaaaaagattcatgttctgtcgttcctatggtaaaagat
tacttttcacgatgtgtcgatgattactacgaggcgaaagaagatcaccaggcttacact
gaaggttggaaattgcctgccaacaacacggggtttcccagcctgttggcgactcaagga
ccctggtgctatagcacagctgatgagttgaaaggatacgcgtacaaaggagaagtaaaa
acgtactcagggggtgggtatgtgctggaattgtcacacatctactataaagcccagcga
caaataaaagatgccagatcaaagctttggatggaccgtttcacgcgcagtgtttttaca
gagttcaacctgtacaatccaaatatcaacctattctctgcagttacacttcttttggag
agaccaccaactggcgggctgcttccgcgagtggaagtacttgcttatcggctctaccgc
tacgtcggtgatttccagttgtttattctcgcctgcgaagtcttatttctagtctttgtt
ctttacttcacgtatcgagaagcgaagaaggtacacaaaatgcgtctggcgtacatcatg
gaaagctcgaaccttcttgaattagtgaccttgattctaagctggacttcgattggatat
tactttgtttggctgggattgaggaaatggaccttgaaactttatcatgacaacccaacc
aagtttataagtttccagtacctatcggcatggcagttaacgttcgagggtgtggtcggg
ttaacagtgttcgttacttgcctcaaattcatcaaattgtttcgatttaaccgaagaatc
tttctcctatcctgcacactgaggcaagccggcggagaactcctgccgtacttcatagta
tttatgatcaattttctggcatttgcacaggtttatcatatcttgttagctagcgaatat
gactccttccgcacgctcattggttccatgcaaaaactactcagcgcactgctgggaaaa
tttaatattgcagaaatgatgagtgcttacagggttctaacagctgtaatttttatcgta
tacatgataattacgaatttcctttttctaaacgtcttaattgttattattattgattca
tttgctgtcgtcaagcagcaaaatgatgaaatgcaaaacgagtttgagttgctagaatat
gtcactgaacgcatcagaggtgtcttggggatacgaaaactgaacaaaatcactggaact
catgagtttcgaaactcaaatattgagagtgaacacgaacaggggtcagaccttggagaa
aacataactcaagaagaccaactcaacattgctgagttgttagaggaagcattagacaaa
ttagatgctaaactcaatgagatgaagaacacaatcaatgatgacatgttgtgttattat
gcatcccatagaattcccggataccacattgttaagcaagtacaataa
DBGET
integrated database retrieval system
