Acropora digitifera (stony coral): 107356604
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Entry
107356604 CDS
T04352
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
adf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107356604
09124 Replication and repair
03420 Nucleotide excision repair
107356604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107356604
03400 DNA repair and recombination proteins [BR:
adf03400
]
107356604
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107356604
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107356604
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107356604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
DEAD
Helicase_C
SNF2-rel_dom
Sigma54_activat
DUF3245
Motif
Other DBs
NCBI-GeneID:
107356604
NCBI-ProteinID:
XP_015778693
LinkDB
All DBs
Position
Un
AA seq
577 aa
AA seq
DB search
FVFYCQAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYRLTAYSLYAAVSVGLQ
TSDIIEYLRRLSKTTIPDGIIQFIKICTLSYGKVKLVLKHNRYFVESNFPEVLQHLLQDS
AIEHCRKRTVDDFQNELSENQLIKSSVGGKASLKLNKPQPESNGNSSHANEQEQSSEAPS
IPTDITDYIEKIDQDEDEEESQTYSFEVAQEHIETLQRKCIELDYPLLAEYDFKNDAVNP
DLNIDLKPTTVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKTLVGVTAACTVRKRCLVL
CTSGVAVEQWKSQFKMWSTIDDRTICRFTSDAKDKPVNCNIAISTYSMVSFTGKRSWEAG
EVMNFMQTQEWGLMILDEVHTIPAKQFRRVLTVVQAHCKLGLTATLVREDDKIQDLNFLI
GPKLYEANWMELQNNGFIARVQCAEVWCPMTPEFYREYLNIRTRKRKLLYVMNPNKFRSC
EFLIRYHERRNDKVIVFSDNVFALKKYAEKLKKPFIYGPTSQGERMQILQNFQHNPLVNT
IFISKVGDNSFDLPEANVLIQVRFVSVLTNTTMTSAK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttcgtcttttattgtcaggctcctgacggccacattttcttggagtctttttctccagtg
tataaacatgctcatgactttctcatagctatttcagagcctgtttgtagaccagagcat
atccacgagtataggctgacagcttattctctttatgctgctgtgtcagttggccttcag
acaagtgatatcattgaatatttgcgacgcctaagcaagaccacaattcctgatggaata
atccaatttattaagatttgcactcttagctatggcaaagtgaaacttgtcttgaaacac
aacagatactttgtggagagcaactttccagaggttctacagcatctactgcaagattca
gcaattgagcattgccgcaaaagaacagttgacgactttcagaatgagttgagtgagaat
caactgattaagtcctctgttggtggaaaggcctccttaaagctgaacaaaccacagcct
gagtcaaatggtaattcttcccatgcaaatgaacaggaacagtcttcagaagcaccatct
attcctacagatatcactgattacattgaaaaaatagatcaggatgaggatgaagaagag
agtcaaacctattcctttgaggtggctcaggaacacatagaaactttacaaaggaagtgc
attgagttggattatcccctgcttgctgagtatgatttcaagaatgacgctgtaaaccct
gatctgaacattgacttaaagccaactacagttttgcggccttaccaggaaaaaagtctt
cgcaagatgtttggtaatggtcgtgcaagatctggtgttattgtgcttccgtgtggtgcg
ggtaagactctggttggtgtgacagcagcttgtacagtcaggaagcgatgcctggtgctt
tgtacatctggtgttgctgttgaacaatggaagagtcagttcaagatgtggtcaacaatt
gatgatcgtacaatctgccgcttcacgtcagatgccaaagataaacccgtcaactgcaat
attgctatttcaacgtattcaatggtatctttcactggaaaacgatcttgggaagccggc
gaggtgatgaatttcatgcagacgcaggaatggggattgatgattttagatgaggttcat
acaataccagctaaacagtttagaagagtgttaacagttgtccaagcacattgcaagttg
ggacttacagcgacgctggtccgtgaggatgacaaaatccaggaccttaatttcctcatc
ggacccaaactttacgaagccaattggatggaactacaaaacaatggatttattgcacgt
gtccagtgtgcagaggtttggtgcccaatgacgccagagttttaccgagaatatctgaac
atcagaacacggaaaaggaagttgttgtatgtcatgaacccaaataagttcagatcttgt
gagtttttgattcgctaccatgaaaggcggaatgacaaagtcatcgtattttctgacaat
gtgtttgctcttaaaaagtatgctgagaaattaaagaagccttttatctatggtccaacg
tcgcaaggcgaacgaatgcaaattctacagaattttcagcacaacccactcgtcaacaca
atatttatctccaaggttggagataactcatttgatcttccagaggccaatgttctgatt
caggtacgttttgtgtcagttttgactaacacgaccatgacatcagcaaaatga
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