Acropora digitifera (stony coral): 107357682
Help
Entry
107357682 CDS
T04352
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107357682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107357682
03400 DNA repair and recombination proteins [BR:
adf03400
]
107357682
Enzymes [BR:
adf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107357682
Messenger RNA biogenesis [BR:
adf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
107357682
DNA repair and recombination proteins [BR:
adf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
107357682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
Motif
Other DBs
NCBI-GeneID:
107357682
NCBI-ProteinID:
XP_015779801
LinkDB
All DBs
Position
Un
AA seq
529 aa
AA seq
DB search
MQDQVKFLKSIGVTAEFIGEDQQDDAAKTAVERGDCQIVFGSPESFLSSDRWRKMLSSKV
YEERLCLVAVDEAHCISHWGYAAKKGERAFRKWFSRINEIRSIIKKVPVIALTATATTET
RLQTVRTLEMKSPALIVDIPNRQNISYGVQVITPNPSVTFAKMVSDLKVQKTAYERTIIY
CPTIKLTTHLYGFFQAELRENIYADEVHDPKKRIVEMFHSRSDELNKEEILKSMGESNGC
IRVLIATIAYGMGIDCKDVKTVIHYGPSYNCETYLQESGRAGRRGQDQCKSVILYSNIMT
KHCHESMVTYLKQNDKCRRKVLLEKFDVDVSKLPAYEYPHRCCDICQQQCKCDGDTCNFV
FFNLECSPTALVETESNERTVTEDQMTLLNSKLNYLKRALNQQFLQSAKKSNAPMFTPAK
LFCGFGDNQIKQIMQHCSHMFSASDVYKYVDIWHPTVASEVLFTISTIFEDVDISHLDME
ESEDTQEYYFDIFDAIFDFDVEDSLMAAIPLELLSVDEDTMDSDMEDSN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcaagtgaaatttcttaagtcaattggagttactgctgagtttatcggtgaa
gatcaacaggacgacgcggccaaaacggcggttgaacggggcgactgtcagatcgtgttt
ggatctccggagtcatttttaagttccgatcgatggagaaagatgttatcgagtaaggtg
tacgaagagagattgtgccttgttgctgtagatgaagcgcactgtatttcgcattggggc
tatgcagctaaaaaaggagaaagggcatttaggaaatggttttctcgtataaacgagatc
cgatcaatcatcaaaaaggtaccagtgatagccctcactgcaactgccacaactgaaaca
agacttcagactgtgagaacattggaaatgaagagtccagctttgattgttgacatcccc
aacagacagaacatctcctatggtgtgcaagttatcactcccaacccttctgtgacattt
gcaaaaatggtgagtgacttgaaagttcaaaagactgcgtatgaacgaaccataatatac
tgtcccacaataaaacttacaacccacttgtatggcttttttcaagccgaactaagggaa
aacatttatgcagatgaagttcatgatccaaagaaaagaattgtggaaatgttccacagc
agaagtgatgaacttaataaagaggagatactgaagtccatgggagagagcaatggttgt
atacgtgtacttattgcaacaattgcctatgggatgggtatcgattgcaaggatgtaaaa
actgtgattcattatggcccatcatacaattgtgagacatacctacaagaaagtggtcga
gccggacggagaggtcaagaccagtgcaaatcagttattttgtactcaaatataatgacc
aaacattgccacgaaagcatggttacctatttaaaacaaaatgacaagtgcagaagaaaa
gttcttttggagaagtttgatgtggatgtctcaaaattgcccgcctatgaatatccacac
cgttgttgtgatatttgccaacagcaatgcaaatgtgatggtgatacatgcaattttgtg
ttttttaatttggaatgttctcctactgctttggttgaaactgaaagtaacgagagaact
gtcactgaggaccaaatgacactactcaattcaaaactcaactatctaaagagagcattg
aatcagcagtttctgcagtcagccaagaaaagcaatgcacctatgtttactccagcaaag
cttttttgtggatttggagacaatcaaataaagcagattatgcaacattgctcgcacatg
ttttcagccagtgatgtgtataaatatgttgacatttggcatcccactgtggcctcagaa
gttttgttcactataagtacaatttttgaagatgttgacataagccatttggatatggag
gaatcagaggacacccaggaatactattttgacatttttgatgccatttttgactttgat
gtggaagactcacttatggcagctattcctttggaactcttatctgttgatgaagatact
atggattcagacatggaagattctaattaa
DBGET
integrated database retrieval system
