Acropora digitifera (stony coral): 107358065
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Entry
107358065 CDS
T04352
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107358065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adf03400
]
107358065
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107358065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
PWWP
MutS_III
MutS_I
MutS_II
MutS_IV
Dehydratase_hem
AAA_29
Motif
Other DBs
NCBI-GeneID:
107358065
NCBI-ProteinID:
XP_015780182
LinkDB
All DBs
Position
Un
AA seq
1079 aa
AA seq
DB search
MATLFSYFNKTPKGKKPPSPVCSEIADKKKSNSPKEGAKGFSPINDDKSRVNGKAKRKNE
ESCSGEIQLYDVVWAKLEGHPWWPSLVCKHPTQDAFQQKGKYHVQFFGEPSSRAWVKMNN
VKPFIKKLNNNVVDPTIKKAAQQAEDTLSLAREQRNKLVKCLPSDEEESSEEEGQSMQLD
GESLDKALNSQKRKNANHDDDDDSDEEVIGRKQNGKRPRRKATLRNSKTKKRRVIQSGSE
GDSEDDYKPDDDNDDDDESCSSGVDEKELEDEVLHSEDEIEDNTEKQSRKRKRGKVSTPH
QQKTKSRKPSTPCTPVTSGASSVNTPSPSGVLPGTLAKKVSSSASKAAESLARFQMTASP
TPSSNVDKEGGEGSYTHERLDWLKEDKRRDKHGRPMSHPEYDPRTLLVPSSFLTSKEVTP
FVQGNFAHAGFPEIAFGRYSDTLIQKGYKVARVEQTETPEMMKERCRKTLSVSRSDQVVK
REICAVITKGTKTYSFLDGDCTDSEAAYLLAISEKGSDDSSGGESVYGVCFVDTSIGRFH
IGQFQDDRQASRLRTLVAHYTPVQVLCCRGGVTLKTQHVLSHELMSSMKEYLIPGSQFWE
ASKTLKVLAEEEYFKEDKTSTENSVKSWPEILRKLTDGAYRLNAVEDLMANRGLMAECKE
LLRTLPDLERLLKKIHALSLPKDPNHPAHRAILYNEDTYSKRKINDFLTVLEGFGKATEV
TYWGSAKNRFQLEVPDSIRKIPDEYTLQSQKKGFKRYWTAEIEDKLAELVNAEERREEAL
KDTMRHVFHKFDQEYKTWDKAVQCLAVLDSLISLASYRSEQPLFFHRLEASLHVFCCFLF
NKSFRIKKKATASITFHFPFNQQPFFEIRDGRHPCISRTFSGGDFIPNDTVVGIKNDEDC
EETAVNSHSTCVLVTGPNMGGKSTLMRQAGLILIMAQMGCFVPAEKCRLTPVDRVFTRLG
AQDRILSGESTFFVELNETSTILKHATQHSLVIVDELGRGTATYDGTAIACAVVRALSRQ
IRCRTLFSTHYHSLVEEFSADENVRLGHMVSCSEIHVCIFAPVSFVRGFTATNMKLRLV
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttttctcttacttcaacaaaacaccaaaaggtaagaaaccaccttctcct
gtctgcagtgaaattgcagacaaaaagaaaagcaattccccgaaagaaggagcaaaaggc
ttttcgcccataaacgacgacaaatcaagagttaacgggaaggcaaagagaaagaacgaa
gaatcatgttctggagaaattcaactttatgacgttgtgtgggctaaactcgagggtcat
ccttggtggccaagtttggtttgcaagcatcctacgcaagatgcatttcagcaaaagggg
aagtatcatgtacagtttttcggcgaaccgtcaagtagagcttgggtgaagatgaataat
gtaaaaccattcattaaaaagttgaataacaatgtggtcgacccaacaataaaaaaggca
gcccaacaagcggaggataccctgtctcttgcaagagaacaaagaaacaaacttgtgaag
tgcttaccctcggacgaggaagaatcttcagaagaagagggacagtcaatgcagttggat
ggagagagtttggacaaagccctgaatagtcagaagagaaagaatgcaaatcatgatgat
gatgatgatagcgatgaggaggtcattggaaggaagcagaacggcaaacgtcctaggagg
aaagctactctaagaaattctaaaacaaagaaaagacgggtaattcaatctgggtctgaa
ggagattctgaagatgattataaacctgacgacgataatgatgacgatgatgagagctgt
agcagcggtgtcgatgaaaaggagttagaagatgaggtgcttcattctgaagatgagatt
gaagataacactgaaaagcaatcacgtaagcgcaaaagaggaaaagtgtctaccccacat
cagcagaaaacaaagtctcgtaaaccttccacaccttgcacacctgtcactagtggtgca
tcctcagtaaacacaccttcaccctcaggagtactgccagggacattagcaaagaaggta
tcaagctcggccagtaaagctgcggaatctttggccagattccaaatgactgcatcgcca
acccctagctcaaatgtagacaaggaaggtggtgaaggaagctatactcatgaaaggttg
gactggttaaaagaagacaagagaagagacaaacatggcagaccaatgtctcaccctgaa
tatgatccaagaacactactggttccttcgtctttcttaacctccaaagaagtaacacct
tttgttcagggtaattttgctcatgctgggtttccagaaattgcatttggtcgttactct
gatactctaattcagaagggttacaaggttgcaagagtggaacaaacggaaaccccagag
atgatgaaagagagatgcaggaaaactctctctgtgtcaaggtctgaccaggtggtcaag
agggaaatatgcgcagttatcaccaaaggaacaaagacatacagttttcttgatggtgac
tgcacggacagtgaggcagcttaccttctagctatttctgagaagggatctgatgattcc
tcaggaggtgaaagtgtttatggagtttgttttgtcgatacatctattggaagatttcat
attggacaatttcaagatgatcgccaagcttctcgcctcaggactctagttgctcattat
actccagtgcaggtgttatgttgccgaggaggtgtaaccttgaagacccaacatgtgctt
agtcacgaattaatgtcatctatgaaagagtatcttattccagggtcacagttctgggaa
gcaagcaagacattgaaagtcttagcagaggaagaatatttcaaagaagacaagacaagc
acagagaattctgttaagagctggcctgagatattgagaaaattaactgatggagcttac
aggttgaatgcagttgaggatctcatggcgaaccggggattaatggcagaatgcaaggaa
ctgttgcgaaccttacccgacttggaaagattattgaagaaaatccatgcgttgagttta
cccaaagacccaaaccatccagcccaccgagccattttgtacaatgaagacacatacagt
aaacggaaaataaacgactttcttactgtgttggaaggcttcggtaaagcgacggaggta
acttactggggatcagccaagaatcgtttccaactggaagtcccagattccattcggaaa
attccggatgagtacactctgcagtctcagaagaaaggatttaaacgttactggaccgca
gagatcgaagataaactggctgagctcgtgaatgcggaggaaagacgcgaggaagctttg
aaggacaccatgagacatgtgttccataagtttgaccaagagtacaagacttgggacaaa
gctgtccagtgtcttgctgtgttggactcgcttataagccttgcttcttacaggtcagag
caacctttattttttcatcgattagaagccagccttcatgtgttttgttgttttctattt
aataagagctttcgtataaaaaaaaaagctacagcatcgattacgttccattttcctttc
aaccaacagccattctttgaaatccgcgatggccgccatccttgcatttctcggaccttt
agtggcggtgatttcattcctaatgacactgttgttgggataaaaaatgacgaggactgc
gaggagacagcggttaacagtcacagcacatgcgtgttagtcaccggtcctaacatgggt
ggcaaatcaactctgatgagacaagcaggacttattttgattatggcgcaaatggggtgt
ttcgtgccagctgagaagtgccgtctaacccctgtggatcgtgtttttaccagacttggt
gctcaagacaggattttatcaggtgaaagtacgttctttgtggagctcaatgaaacatct
accattctcaaacacgctacccagcattcactggtcatcgtggacgagcttggacgaggg
accgccacgtatgatgggacagctatcgcttgcgctgtagttcgagcgctgtcgaggcag
ataagatgcagaactctcttctctacacattaccattcacttgtggaagagttctccgcc
gatgagaatgttcgtcttggtcatatggtaagctgcagcgaaatacatgtatgcatattt
gccccagtttcctttgttcgcggtttcacggcaacaaacatgaaattgaggcttgtgtga
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