Acropora digitifera (stony coral): 107358168
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Entry
107358168 CDS
T04352
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03022
Basal transcription factors
adf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107358168
09124 Replication and repair
03420 Nucleotide excision repair
107358168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adf03021
]
107358168
03400 DNA repair and recombination proteins [BR:
adf03400
]
107358168
Transcription machinery [BR:
adf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107358168
DNA repair and recombination proteins [BR:
adf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107358168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_2
zf-UDP
TRAF3_RING
zf-RING_4
BTB_KLHL33
zf-RING_UBOX
zf-RING_6
DNA_ligase_ZBD
Motif
Other DBs
NCBI-GeneID:
107358168
NCBI-ProteinID:
XP_015780282
LinkDB
All DBs
Position
Un
AA seq
322 aa
AA seq
DB search
MDDWQTCPRCKTTKYRNPKLKLLVNVCGHKLCETCVETLFTRPSAACPECNTALRRNDFR
IQQFEDLIVEKEVDIRKRILKIYNKEVKNLCLHSGHEVEKTWSITYSSPLKLGWYGVWNL
ANGQDVEETKKQIDKYKKDNESLIRKNNFKLGREEAMITSQIEEDERLAEQRRVEALLLE
KQEKNDKKKENEQFLDRLVMTMKWFALFQCFIFHIRIVAEHASKLQKKSLLFSGRSTQGS
SLQKETVAPLPSTEGSKFVYVAPQVENNGPTAPDMEVLASRGYLRHIRSATRAEKAGGFS
SELACGRAIQEAFAGLYLGIES
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacgactggcagacttgcccaagatgcaaaacaaccaaatacaggaatcccaagttg
aaacttctggtgaatgtgtgtggccacaaattgtgtgagacttgtgttgagacgctgttc
accaggccctcagctgcttgccctgagtgtaacacagccttgagacgcaatgactttagg
atccaacaatttgaagatcttattgttgagaaggaggtcgacatcaggaaaaggatcttg
aaaatctacaacaaggaagttaaaaacctttgtttgcactcaggccatgaagtggaaaaa
acatggtccataacttacagttctcctctcaaacttggttggtatggagtttggaacctt
gcaaatggtcaagatgtagaggagacaaagaaacaaattgataaatacaagaaagacaat
gaatctcttataagaaaaaacaattttaaactgggtagagaggaagctatgattacctca
caaattgaagaagatgaacgacttgctgagcaaagacgcgtggaagcacttttgttagaa
aaacaggaaaaaaacgacaagaagaaagaaaacgagcaattcctggacagactggtaatg
acaatgaaatggtttgctttgtttcaatgcttcatcttccatataaggatagttgcagaa
cacgccagtaagctacagaagaaatcgttgttgtttagtggtaggagcactcagggatct
tcgctgcaaaaggagactgtcgcccccttgccatctaccgagggctctaagttcgtctac
gtggctcctcaagtggaaaataacggcccaactgcacctgacatggaagtgctagcctcg
agagggtacctcagacacatccgaagtgctactcgggctgaaaaagccggtgggttttct
tctgagctggcctgtgggagagcaattcaagaggcattcgcgggactctacctcgggatc
gagtcgtag
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integrated database retrieval system
