Ammonifex degensii: Adeg_0378
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Entry
Adeg_0378 CDS
T00994
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
adg
Ammonifex degensii
Pathway
adg03410
Base excision repair
adg03430
Mismatch repair
adg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Adeg_0378
03430 Mismatch repair
Adeg_0378
03440 Homologous recombination
Adeg_0378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adg03400
]
Adeg_0378
DNA repair and recombination proteins [BR:
adg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Adeg_0378
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Adeg_0378
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Adeg_0378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
ACX51532
UniProt:
C9RBA5
LinkDB
All DBs
Position
383631..386228
Genome browser
AA seq
865 aa
AA seq
DB search
MSSWIPFPQQPLACALWARELGIDPVLAQILLNRGVKTLEEADFFLNGRLAQLPPPGKMK
DLERAVKRIRSAVANQEKILVWGDYDADGITATVLLVSVLKHLGAEEVTYHLPTRADGYG
LKGDFLRAAKEQGVSLVLTVDCGVKASEEARLCKLMGLDLIITDHHEPSDELPEAWAVIN
PRRPDCPYPFKELAGVGVAFKLATALSREAAEEWLDVVALGTVADVMPLVGENRVLVREG
LKLFNSSRLRPGLAGLLSAAGASLPVTVRTLSFVLAPRLNAAGRIGDPDVAARCLLAVEE
EAEQWSRKLEELNRERQRWENACLKEADLLAKRAREASSRVLVVEASDWPVGLTGLIAQR
LHSLYQLPAFVIVWEGEVGRGSGRADESFNVYQALSHASPYLLDYGGHAGAGGFTLTRES
FPHFVASLEEYARNLPPDRTYHACRYFDAVLELEKLTPRLMEELGRLEPFGPGNPPPRLV
AQGVEVVEVRRVGKEEEHLRLRLRQGRACLEGVAFGRGGEELPRLVDLVFEPSINELTGQ
PELKILDWWPAGQTVSFIQPFPAAILAREAASRLSLPFDVHLPEKTTPSLPRICRREALV
DLREHPDRWRVLLSWLDAPVAVVVATPARACEVVTYLSLHLPERADQILLFYGGLEDYKE
WLRKLATAGELPILVTTPALGGRFSSERDVILFDLLFSREQWEWLRGAGGRRLILLFNRQ
DREAARQRLHLLAPPRRVLLDFYRFLVRKAQGSNEVWLKPEEALARLKSAYLLSPGKETL
RTVLQILTELDLVKELANGEEGLYLRLTRPKTRRFLPEAPTFAARHAFKREVLSFQRYFL
EAPAEELKEFFRCDIIDPGGSYGAL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctggatccccttcccccagcagcccttggcttgtgccctgtgggcgcgggag
ctgggtatcgacccggtgctggcccagatcctcctcaaccggggcgtgaaaacgctggag
gaggcggattttttcctcaacggccggctcgcgcagctccctcctcccggtaagatgaaa
gacctggagcgggcggtaaagcgcataaggtcagcggtagccaaccaggaaaagatactg
gtctggggggactacgacgctgacggcataactgccaccgttctcttggtctcggtgctg
aagcacctgggggccgaggaggtcacctaccacctccccacacgggccgacggctatggg
cttaagggagatttcctgcgggcggctaaagagcagggagtgagcctggtgctcactgtg
gactgcggtgtaaaggcgagtgaggaggcgcgcctctgtaagctgatggggctcgacctc
atcatcaccgaccaccacgaaccgtcggacgagcttccggaagcctgggccgtgataaac
cctcggcgacccgattgtccctatccttttaaagagttggccggggtaggggtagccttc
aagctggccaccgctctgagtagagaggcggcagaggagtggctcgacgtagtggcgctg
gggacggtagctgacgtcatgccgctggtgggggagaaccgtgtgctcgtccgggagggc
ttaaagctttttaactcctcccgactgcgccctggtcttgccgggctcttgtccgctgcc
ggtgcttctttaccggtcacagtgcgcaccttgagtttcgtcctagcgccgcgcctcaac
gcggcgggaaggataggggatccggatgtagctgcccgctgtcttttggctgtcgaggaa
gaggcagagcaatggtcgagaaagttggaggaactgaaccgcgagcggcagcgctgggag
aacgcctgccttaaagaggcggaccttctggcgaagagggcgcgagaagcctcaagcagg
gtcctggtggtagaagctagcgactggccggtaggacttaccggtctcattgctcagcgc
ctgcactccctttaccagctccccgcctttgtcatcgtctgggagggggaagtagggcgg
ggttcggggagagccgacgaaagtttcaacgtctaccaggccctaagccacgcttctccc
tacttgctggactacggggggcacgccggagcggggggcttcaccttgacccgcgaatct
ttcccccacttcgttgcttccctggaggagtacgctcggaaccttcctccggaccggact
tatcatgcttgccggtacttcgatgcagtcctggaactggaaaagcttaccccacggctc
atggaggaacttggccggcttgaacccttcggtcccggcaatcctcctccccgcctggta
gcccaaggggtggaagtggttgaagttcgccgggtggggaaagaagaggagcacctaagg
cttaggctgcggcagggcagggcttgtctggagggggtagccttcgggcggggaggggaa
gagcttccgcgcctggtcgatctagtcttcgaaccgtcaattaacgagttaacgggacag
ccggagctaaagatactggactggtggccggcgggccaaacagtttcttttattcagcct
tttcctgccgcgatccttgcgcgcgaagccgcctcgcgcttaagcttgcctttcgatgtt
cacctcccagagaaaaccacaccctctctccccaggatttgccggagggaggccctggtg
gacctccgggagcaccccgaccggtggcgggtgctcctttcttggctcgatgcaccggtg
gcggtggtggtggccactccggcccgggcctgcgaggtggtgacttacctttctcttcac
ctgcccgagcgggccgatcagatcctactcttctacggcggcttggaggattacaaagag
tggcttcgcaagctggcaaccgccggcgagctacccatcctggtgaccacgccggcccta
ggcgggaggttttcgtcggagagggatgtgattctcttcgatttactcttttcccgggag
cagtgggagtggttgcggggggcaggggggaggaggcttatcctcctctttaaccggcag
gatagggaggcggcccggcagcgcctgcacctcctggctccgccgcgccgggtgctgctc
gatttctaccgcttcctggtaaggaaagcccaaggatcaaacgaggtgtggctcaagcca
gaggaagcgctggcccggctcaagtcagcttaccttttgagtccgggaaaagaaaccttg
cgtacggtcctacagatcttgacggaactggacttagtgaaggaactggccaacggagaa
gaaggattgtaccttcgtttaactcgacccaaaacgcggcgttttcttccggaagctcct
acctttgcggcccgtcacgctttcaaacgcgaagtcctctccttccagcgctacttcctg
gaagcgccggcagaggaactgaaagagtttttccgctgtgatataattgaccctggtggg
agctatggagctttatga
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