Ammonifex degensii: Adeg_1659
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Entry
Adeg_1659 CDS
T00994
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adg
Ammonifex degensii
Brite
KEGG Orthology (KO) [BR:
adg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adg03016
]
Adeg_1659
Enzymes [BR:
adg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Adeg_1659
Transfer RNA biogenesis [BR:
adg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Adeg_1659
Prokaryotic type
Adeg_1659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACX52752
UniProt:
C9R8X3
LinkDB
All DBs
Position
complement(1646933..1647844)
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AA seq
303 aa
AA seq
DB search
MIGVLNVLKPPGMTSHDVVDWLRRLTGEKKVGHAGTLDPDACGVMVLLIGKATRAAQFLV
TEDKEYRAEAVFGVRTDTLDLSGRVLACQDASWLTPEAVAEVLPQFTGSIWQKPPMFSAV
RYKGKRLHELARAGQEVEVPPRRVEVYSLQLLKGDWGKRHPRVWLHVHCGKGTYVRSLVA
DLGEALGTGACLGFLLRTRVGRFGIGEAYTLEELARLKEEGKLAKALIPLAEALGHLPAI
EVGEEGAKRIKNGGFLSPAHCLAGKWPSEGTHVRVMGAGELLALALAESLPSGQKVLRPV
WVL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggggtgctcaacgtgctcaagccccccggaatgacctcgcacgacgtggtggat
tggctgcgccgcctgacgggggagaagaaggtggggcacgcgggcaccttggacccggac
gcctgcggggtgatggtgcttcttataggaaaggccacccgggcagctcagttcctggtg
acggaagacaaggagtaccgggccgaggcagtctttggtgtcagaaccgatactttagac
ctcagcggtcgggtgttggcctgccaggacgcctcctggcttacgcccgaagcagtagct
gaagtcttgccgcaattcacagggagcatctggcaaaagcctcctatgttttcggctgtt
cgctacaaaggcaagcgcctccacgagctggcaagggcggggcaggaggtggaggtgccg
ccgcgccgggtggaagtttactctctgcaactgctcaagggggattgggggaaaaggcac
ccccgggtgtggcttcacgtgcactgcggcaaagggacttatgtgcgctctttggtggct
gatctgggtgaggctctgggaacgggagcctgcctggggtttctcctgcgcacccgggtg
gggcgcttcggaataggagaggcttataccctggaggaactggccaggctgaaggaagaa
gggaaacttgccaaagctctgattcccctggcggaggctctaggacacctgccggcgata
gaggtgggagaagaaggggctaagaggatcaagaacggaggatttctttctccagctcat
tgtcttgccggaaagtggccttcggaagggacccacgtgcgagtcatgggtgcaggagaa
cttctggccctggctctggccgaatcccttccctccggccagaaggttttgcgaccggta
tgggtattatga
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