Ammonifex degensii: Adeg_1726
Help
Entry
Adeg_1726 CDS
T00994
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
adg
Ammonifex degensii
Pathway
adg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
adg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Adeg_1726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adg03021
]
Adeg_1726
Transcription machinery [BR:
adg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Adeg_1726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
HTH_10
Exonuc_VII_L
HTH_20
TetR_C_24
tify
Motif
Other DBs
NCBI-ProteinID:
ACX52818
UniProt:
C9R939
LinkDB
All DBs
Position
complement(1717804..1718913)
Genome browser
AA seq
369 aa
AA seq
DB search
MSGKENRAERQEYQNEIEQLIEKGRKTGVLTYAEIMDDLQGMDLTPEQIDEIYERLAAEG
IDVVPEAQDLGEGELKEERLGGEEETELGIPEGVEIDDPVRMYLKEIGRIPLLTPEEEIE
LAKRMEQGDEEAKRRLIEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDWRK
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVSRQLVQELGREPTPEEI
AEKMGISPEKVREIMKVAQEPVSLETPIGEEEDSHLGDFIEDQEAQAPAEEASYALLREQ
LNEVLQSLTPREQKVLRLRFGLDDGRARTLEEVGQKFGVTRERIRQIEAKTLRKLRHPSR
SKKLKDYLE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaaaggagaaccgagccgagcggcaagagtatcagaatgaaatcgaacagctc
atcgagaagggccggaaaacaggagtgcttacttacgcggagataatggacgatctgcag
ggcatggatctcacgcccgagcagatagatgagatatacgagcgcctggcagcggagggg
atagacgtggtgcccgaggcgcaggatctgggagagggagaactcaaagaggagaggctt
gggggtgaagaggagacggagctcggcattccggaaggggtagagatcgacgaccccgtg
cgcatgtaccttaaggagatcgggcgcatccccctccttacccccgaagaggagatagag
ctggctaagcgcatggagcagggggacgaggaagcaaagcggcggctcatcgaggccaac
ctgcggctggtggtctccatcgccaagcggtacgtgggccggggaatgctcttcctcgac
ctcatccaggagggcaacctggggctcattaaggcggtggagaagttcgactggcgcaaa
ggatacaagttctcgacctacgccacctggtggatccggcaggccataacccgggctatc
gccgatcaggcccgcaccatccgcataccggtgcacatggtggagaccatcaacaagctg
gtgcgcgtctcgcggcagctggtgcaggagctggggcgcgagcccactccggaagagatt
gccgagaagatgggcattagtcctgaaaaggtgcgggagatcatgaaagtggcccaggag
ccggtgagcctggagacacccataggcgaggaagaggactcgcacctgggggacttcatc
gaggaccaggaggcgcaggctccggcagaagaggcttcctatgccctgcttcgggagcag
ctcaatgaggtgctgcagagccttacccccagggagcagaaggtgctgcggctgcgcttt
ggcctggatgacggccgcgcccgcaccctggaggaagtggggcagaagtttggcgtcacg
cgggagcgcatccggcagatagaggccaagactttgcgaaaactgaggcatcccagccgc
tcaaagaagctcaaggactaccttgaatga
DBGET
integrated database retrieval system
