Aeromonas dhakensis: CK627_02125
Help
Entry
CK627_02125 CDS
T05186
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CK627_02125 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_02125 (recD)
Enzymes [BR:
adh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CK627_02125 (recD)
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK627_02125 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SLFN-g3_helicase
SRP54
T2SSE
TraI_hel_assoc_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ASX09661
LinkDB
All DBs
Position
complement(394985..397024)
Genome browser
AA seq
679 aa
AA seq
DB search
MKSAIMIERLKALALAGRIRQLDLQFAKLVADLGGGPELVLGAALACFELGRGHVCLPLE
MLSAGSLRPFGLDPDQGRDLLADLADPASWPALFAASPLVGGEQDEGEAPRWPLRLWHGR
LYLTRYHDHEQGVARHLRALSERAEWPEIAPALSRLFARDYGLVFGALLKARLAPDFSAR
HFIEKYLDLVFPSEVEWPAIEGLLASAQAANDLSKLDALVPEALCCNGQKLAAATAAARP
FAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTESIGSALQAL
DLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHKGNPLHLDLLVVDEASMVDLPMMARLL
DALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGYRLQGTPGG
APVRDSLCLLAKSWRFDQHSGIGQLARACNGGDAAAVESVWGMGFADISLHPWAGEAYDE
LIAQGVAGYGSYLKAARAGEAPAAVFKAFNGFQILCALRDGPFGIEGLNERLELALSRAG
LIARDSDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDESGRLKVWFEQPDGTLRALLPSRL
PPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDLYGDRALLA
QAVRKKTERYSGLAQRLGE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgcaatcatgatcgaacggctcaaggccctggcgctggcggggcgcatccgc
cagctggatctgcaatttgccaagctggtggccgatctgggcggcggccccgagctggtg
ctgggggccgcgctcgcctgcttcgagctggggcgcggccatgtctgtctgccgctggag
atgttatctgccggatccttgcgcccgttcgggctggatccggatcagggccgggatctg
ctggccgatctggcggatccggcgagctggcccgccctgtttgcggcaagccccctggtt
ggcggcgagcaagatgaaggggaagccccgcgctggccgctgcggctctggcacggccgc
ctctatctcacccgctaccacgatcatgagcaaggggtggcccgccatcttcgtgccttg
agtgaacgcgccgaatggcccgagatcgccccggccctgtcgcgcctctttgcccgcgac
tacggcctggtgttcggggcgctgctcaaggcccgcctcgcccccgacttttcggcccgc
cactttatcgagaagtatctggatctggtgttcccaagtgaggtggagtggcccgccatc
gaagggctgctggccagcgcccaggccgcaaacgacctgagcaaactggatgcactggtg
cccgaggcgctctgctgcaacggccagaagctggcggcggccaccgcggcggcgcgcccc
tttgcggtcatttccggcggccccggcaccggcaagaccaccacggtcgccaagctcttg
gccattctggtggagaccggtctgcaagcgggcaaggccccggcgatccggctggtggcc
cccaccggcaaggcggcggcgcgcctcaccgagagtatcggctctgccctgcaggccctg
gacttgccccccgagtgggtcgaagccattcccaccgaggcgggcaccctgcaccggctg
ctcggggtcattccgggccgcagccagttccgccatcacaaaggcaacccgctgcacctc
gatttgctggtggtggatgaggcctccatggtcgacctgcccatgatggcgcgcctgctc
gatgcgctgccgagccacgctcgcctgatcctgctcggcgacaaggatcagctcgcctcg
gtggaggcgggggccgtgctcggcgatatctgcagctttatcgaacagggcatcagcccc
gcccaggcggactggctctcccgccagactggctatcggttgcagggcacacctggtggt
gcaccggtgcgtgacagcctctgtttgctggccaagagctggcgctttgatcagcattcg
ggcatcggccagctggcgcgcgcctgcaacggcggtgatgcggcggcggtggaatcagtc
tggggcatgggctttgccgatatcagcctgcacccctgggccggggaggcctacgacgaa
ttgattgcccagggggtggccggttacggcagctatctgaaggcggcccgcgccggggag
gcacccgccgccgtgttcaaggcgttcaacggttttcagatcctctgcgccctgcgggac
ggcccgttcgggatcgaggggctcaacgagcgcctcgaactggccctgtcacgggcgggg
ctgatcgcccgcgatagcgactggtatgcgggccgccccgtgatggtggtgcgcaacgac
cacggggtcggcctctacaacggcgatatggggctctgcctgcccgatgaaagcgggcgg
ctcaaggtctggttcgagcagccggacggcaccctgcgggcgcttttacccagccggctg
ccacctcacgagacggtctacgccatgaccatccacaagtcccagggctcggagtttgcc
catacagtgctggtgctgcccgacagtcccagcccgctgttgacccgcgagctggtctac
accggcatcacccgcgccaaagcccggctcgatctctacggcgatcgcgccctgctggca
caggccgtgcggaaaaagaccgagcgttattcgggattggcacagaggttgggggagtga
DBGET
integrated database retrieval system
