KEGG   Aeromonas dhakensis: CK627_04240
Entry
CK627_04240       CDS       T05186                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
adh  Aeromonas dhakensis
Pathway
adh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:adh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CK627_04240 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adh03021]
    CK627_04240 (rho)
   03019 Messenger RNA biogenesis [BR:adh03019]
    CK627_04240 (rho)
Transcription machinery [BR:adh03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CK627_04240 (rho)
Messenger RNA biogenesis [BR:adh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CK627_04240 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 OB_RNB AAA_25 S1CSD-TOTE-2 AAA TP_0747_N Mor FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ASX10036
LinkDB
Position
852805..854070
AA seq 421 aa
MNLTELKNTPVSELVQLGESMGLENLARAHKKDIIFAILKAHAKGGEDIFGDGVLEILTD
GFGFLRSADGSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDRPENSRNKILFENLTPLHANERLRMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCELIVLLIDERPEEVTEMQRMVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVYPAIDI
TRSGTRKEELLTTGDELQKMWILRKIVHPMGEIDGIEFLIDKLAMTKTNDEFFDAMRRQQ
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatctgactgaattaaagaacactcctgtgtccgagctggtacagcttggcgaatcc
atggggttggaaaatctggctcgggcgcacaagaaagacattattttcgcgatcctcaag
gcgcacgccaagggtggcgaggatatcttcggcgacggtgtgctggaaatcctgaccgat
ggtttcggcttcctgcgtagtgcagacggctcctacctggccggcccggacgacatctac
gtctccccgagccagatccgccgcttcaacctgcgcaccggcgataccatctccggcaag
atccggccgccgaaagagggcgaacgctacttcgcgctgctcaaggtcaacgaggtcaac
tacgaccgtccggaaaactcccgcaacaagatcctgtttgaaaacctcactccgctgcac
gccaacgagcgtctgcgcatggagcgtggcaacggttccaccgaagacatcaccgcccgc
gtactggatctggcatccccgatcggtaaaggccagcgcggcctcatcgtcgcaccgccc
aaggccggtaagaccatgctgctgcagaacatcgcccagagcatcgcctacaaccacccg
gattgtgaactgatcgtcctgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cggatggtgaagggcgaagtgatcgcctccaccttcgacgagccggcttcccgtcacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgtctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgtgcctacaacaccgtcatcccgtca
tccggcaaggtactgaccggtggtgtggacgccaacgcactgcaccgtccgaagcgcttc
ttcggtgccgcgcgcaatgtagaagagggcggcagcctgaccatcatcgccaccgcgctg
atcgataccggctccaagatggacgaagtcatctacgaagagttcaagggcaccggcaac
atggaactgcacctctcgcgcaagatcgccgagaagcgcgtctacccggccatcgacatc
acccgctccggtacccgcaaggaagagctgctgaccaccggtgacgagctgcagaagatg
tggatcctgcgcaagattgtccacccgatgggtgagatcgacggcatcgagttcctcatc
gacaagctggcgatgaccaagaccaacgacgagttcttcgacgccatgcggcgccagcag
aagtaa

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