Aeromonas dhakensis: CK627_04865
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Entry
CK627_04865 CDS
T05186
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03420
Nucleotide excision repair
adh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CK627_04865
03430 Mismatch repair
CK627_04865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_04865
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK627_04865
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK627_04865
MMR (mismatch excision repair)
Other MMR factors
CK627_04865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ASX10146
LinkDB
All DBs
Position
984019..986190
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVLGSSQRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNKPHILEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGDS
GKVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANCVIANN
AERLGKELWTEGAEGEPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGD
RTLEILRNNARDQGQNLWQSAKALLNDKVLTGRAGNAVRGFVDLIDALEEQVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYQRPDELEDMSDLSAFLAHAAL
ESGENQADEYADAVQLMTLHSAKGLEFPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGVVLNFEGVGQQSRVQIQFDDVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcaaccctgctcgacgggctcaatgacaagcaaagagacgcggtggcggcc
ccccgttgcaacctgctggtgctggccggtgccggttcgggcaagacccgggtactggtg
caccgtatcgcctggctgatgcaggtggaacgctgttcacccttctccatcatcgcggtc
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaagtgttaggcagc
tcgcagcgcggcatgtggatcggcaccttccacggcatcgcccaccgattgctgcgggcc
caccatctggatgcgggcttgccgcaggatttccagatcctcgactccgacgaccagtac
cgcctcattcgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccgcgc
gccgtgatgggctacatcaacggcaagaaggacgaggggctgcgccccggcgacatcgat
ctctacggcgatcccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggactttgcagaactgctgctgcgcgcccacgagctgtgg
ctgaacaagccccacatcctcgagcactaccgcgaccgcttccagaacatcctggtggac
gagttccaggacaccaacggcatccagtacgcctggctgcggatgctggcgggcgacagc
ggcaaggtgatgatcgtcggcgacgatgaccagtccatctacggctggcgcggcgccaag
atagagaacatccagcgcttcctgaccgactatcagggggccgagaccatccgcctcgag
cagaactaccgctccaccgccaacatcctcaaggccgccaactgcgtcatcgccaacaac
gccgagcgcctcggcaaggagctgtggaccgagggcgccgagggcgagccgatttcgttg
tacgccgccttcaacgaggtggacgaggcccgcttcgtggttggccgcctcaaggactgg
aaagagaagggcggtttgctcgccgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgctggaagaggcgctgatgcaggacgccatgccctatcgcatctacggcggcctg
cgcttcttcgagcgccaggaaatcaaagatgccatggcctacctgcgccttatcaacaac
cgtggcgacgacgccagcttcgagcgggtggtcaacaccccgacccgcggcatcggcgat
cgcaccctcgagatcctgcgcaataacgctcgcgatcagggccagaacctgtggcaatcg
gccaaggccctgctcaatgacaaggtgctgaccggtcgcgccggcaacgcggtgcgcggc
tttgtggatctcattgacgcgctggaggagcaggtctccctgctgcccctgcaccagcag
gcggatatcgccatccagcactccggcctcaaggccatgtatctggcggaaaaaggcgag
aaatcccaggcgcgggtagagaacctggacgaactggtcaccgcctgccgccagtaccag
cgtccggatgagctggaagacatgagcgatctctccgccttcctcgcccacgcggcgctg
gaatccggcgagaatcaggcggacgaatatgccgacgcggtacagctgatgaccctgcac
agtgccaaggggctggagttcccgctggtgctgctggtcggcgtggaagaaggcatgttc
cccagccagcaatccaccgaggagtcgggccgcttggaggaggagcggcgtctctgttac
gtcggcatgacccgcgccatggagaagctctacatctgttatgccgaaagccgccgcatc
tatggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcacccaggtcagccgccccacccagtacggccgcttcagt
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgggtgctc
catccaaaattcggcgaaggggtggtactcaacttcgaaggggtcggccagcagagccgg
gtgcagatccagttcgacgacgtcggcgccaagtggctggtgacggcgtatgcaaggtta
gaagcgctctga
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