Aeromonas dhakensis: CK627_06480
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Entry
CK627_06480 CDS
T05186
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adh03009
]
CK627_06480
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CK627_06480
Ribosome biogenesis [BR:
adh03009
]
Prokaryotic type
rRNA helicases
CK627_06480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_C_2
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ASX10449
LinkDB
All DBs
Position
complement(1309133..1310509)
Genome browser
AA seq
458 aa
AA seq
DB search
MNNEFSSLNLSPALLENLASLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGLG
LLSRLDVNRLEVQALVLCPTRELADQVATEIRRLARTLPNVKLVTLCGGTPTAPQSATLS
FGAHIAVGTPGRILKHLEQGTLALDSLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQT
LLFSATYPEGIAQMSRGVQRNPVEVSVESLHEESAIEQKLYEVPAGQRLEALGWLLSHYQ
PGSCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATDV
AARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNIIEEYQ
QAPLPLGDLDIIGRAIKPIAPQMVTLSIDAGRKSKVRAGDILGALTGEGGIAGADVGKIQ
IAEQYSYVAVKQEVAKAALKRLQEGKIKGRSYRARKLG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacgaatttagcagcctgaacctctcccccgccctgctcgagaacctcgccagc
ctgggttatctgcagatgaccccgatccaggcccagagcctgcccctggtactcgacggc
aaagacttgatcgccaaggcaaaaaccggcagcggcaagactgcggccttcggcctcggc
ctgctctcccgcctcgacgtcaaccggctcgaggtacaggcgctggtgctctgcccgact
cgcgagctggcggatcaggttgccaccgagatccgtcgtctcgcccgtaccctgcccaac
gtcaagctggtgaccctgtgcggcggcaccccgaccgcaccgcaatcggccaccctgagc
ttcggtgcccacatcgccgtcggcaccccgggccggatcctcaagcacctggagcagggc
accctggcgctcgacagcctcaagacgctggtgctggacgaagcggatcggatgctggac
atgggctttggcgaagacatcaaccgggtcatcagccacgccccgcgcgaccggcaaacc
ctgctcttctccgccacctatccggaggggatcgcccagatgagccgcggcgtgcagcgc
aacccggtcgaggtgagcgtggagtccctgcacgaggagagcgccatcgagcagaagctg
tatgaagtgccggccggtcagcgcctcgaggccctcggctggctgctcagccactatcag
ccgggctcctgcgtggtgttctgcaacaccaagcgcgcctgcaacgacgtggccgatcat
ctggccgccaagggcttttcggcgttggcgctgaacggcgatctggagcagcgcgagcgg
gatcaggtgctggtgcgcttcgccaacggcagcgccaccatactggtggccaccgacgtg
gccgcccgcgggctggatatcaaggagctgggcgccgtcatcaactacgagctcacctat
gaccccgaggtgcacgtgcaccgcatcggtcggaccggccgcgccggccagcagggcctg
gccctgagcctctatcagccgaacgaggcccagcgcgtcaacatcatcgaggagtaccag
caggccccgctgccgctgggagatctcgacatcatcggtcgcgccatcaaacccatagcc
ccgcagatggtgaccctctccatcgatgcgggccgcaagagcaaggtgcgcgccggtgac
atcctgggcgccctgaccggtgaaggcggcattgccggggccgatgttggcaagatccag
atcgccgagcagtactcctacgtggcggtcaagcaggaggtggccaaggcggcgctcaag
cgactgcaggaaggcaagatcaaggggcgcagctaccgtgcccgcaaactgggctaa
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