Aeromonas dhakensis: CK627_06560
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Entry
CK627_06560 CDS
T05186
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adh03016
]
CK627_06560
Enzymes [BR:
adh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CK627_06560
Transfer RNA biogenesis [BR:
adh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CK627_06560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ASX10463
LinkDB
All DBs
Position
complement(1324972..1326993)
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
TALIRTEKEKEVAEPDELLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIAAQEDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTETPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARICSHARLNYDDVSDWAEHGKALDIDAGVLAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGENGAVLAIHVEPRRIANRMVEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLSGFCALRRWIDSLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLQENGAVVFMPARHILDNKE
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAAELVPGPAPVAPVSE
ADAAPADEAPKAE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctccgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaaaaaggtgatgcacggtgaccgggtg
accgccctgatccgcaccgagaaagagaaagaagtggccgagccggatgagctgctggag
cagtccgtcacccgcttcgtggcccgggtcaagatgttccgcgaccgcctcaacgtggtg
gccgatcatccgctgatcaaggatgccatcaaggcccgcgtcaagaagggtctggacgag
aaagagttcaaggaaggggactgggtggtcgccaccctcaagcgtcacgccctggtggac
ggcaacttctccgccgagatcacccagaagatcgccgcccaggaagatcacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccaggtcgagccggcggatctgccggag
tggaaggtcatcgaagaggaagagctgccccgcaccgatctgaccgagacccctttcttc
accattgacggcgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcctatgtggccgaagggagc
gagctggacaaggaggccgcccagcgcgccttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggggaggagcgc
aacaccctgtgcgcccgcctgctgatcgccgaggatggcctgctgctggaggagaccgag
ttcttcgccgcccgcatctgctcccacgcccgcctcaactatgacgacgtctccgactgg
gccgaacacggcaaagcgctggatatcgacgcaggcgtgctggcccagctgccgctgatg
aaggcgatgaccgaggcgcgcatcaagtggcgcaccgaacacgccctggtgttcccggac
cgccccgactatgacttcgagctgggcgagaacggcgctgtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgtgcc
ggccgcgtgctgggcaagagcgtcggttacggcatcttcaacgtccacaccggctttgac
gaggagtccctcgacggtgccatcgacctgctcaaaagcgccgaggccccgttcgagaaa
gaagagatcgccagcctgtccggcttctgcgccctgcgccgctggatcgacagcctggac
acccgctggctggacggcaagatccgccgcttccagagctatgccctgatgtccgccgaa
ccgggtgcccactacggcctgggtctggatgcctatgccacctggacctcaccgatccgc
aagtacggcgacatggtcaaccatcgcctgctcaaggccgtcatcgccggcaagaccccg
ggtgagcgcccgagtctggagctcaccgagcacctgaccgcctgccgtcgcctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgcgggt
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgtgccggcctcaagctgcgc
ctgcaggagaacggtgccgtggtgttcatgcccgcccgccacatcctggacaacaaggag
cggctggagtgcaactgggacaacggccgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgctccctc
atcgccaagccggcggcagagctggtgccgggcccggcgccggtcgccccggtgagcgaa
gccgatgccgcgcctgccgacgaggcccccaaggccgaataa
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