Aeromonas dhakensis: CK627_08020
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Entry
CK627_08020 CDS
T05186
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adh03009
]
CK627_08020
Enzymes [BR:
adh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CK627_08020
Ribosome biogenesis [BR:
adh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CK627_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
Methyltransf_11
MTS
TRM5-TYW2_MTfase
RrnaAD
PCMT
Methyltransf_15
Methyltransf_12
Methyltransf_23
Methyltrans_SAM
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_4
DOT1
PrmA
Motif
Other DBs
NCBI-ProteinID:
ASX10736
LinkDB
All DBs
Position
1630615..1631937
Genome browser
AA seq
440 aa
AA seq
DB search
MAQFFKPQKKSTQPQRIEFTVDSLDHHCVGIGRHQGKAIFIEGALPGEQVKARILEDKKQ
YAHAALQQVVTPAANRIAPFCSHYRECGGCSAQHLAEADQRAAKEAGLVSLFERLGNIQP
PALEPVLGGESRAYRRVCRLAIKFDKNGRCTRVGFRRRQSNDLVEISGCPVLAEPLSALI
APLRECLNRLKSQRELGHAELIQAEQGILMLLRHTGRPTEADRAQLIEFAKVQGIDLYLQ
AADEQIEPLHQQFAPSYSLDGLSLAFAPGDFIQVNGPVNQRMVEQALNWLEAGKDDKVLD
LFCGIGNFTLPLARQAREVVGVEGALAMVARAEENARRNGIENARFYKADLSGDIAGMSW
AREGFDLVLLDPARPGAFEVMEHVVKLSPRRVVYVSCNPVTLARDSQVLVKGGYRLVRLG
MLDMFPHTGHLESMALFERK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtttttcaagccccaaaagaaatccacccagccccaacgtattgaatttacg
gtagacagcctggatcaccactgcgtcgggatcggccgccaccagggcaaggcgatcttc
atcgaaggggcgctgcccggtgagcaggtcaaggcccgcatcctcgaagacaagaagcag
tatgcccacgccgccctgcaacaggtggtgactccggcggccaatcgcatcgcccccttc
tgcagccactaccgcgagtgtggcggctgcagcgcccagcatctggctgaggcggatcag
cgcgccgccaaggaggccggcctggtcagcctgttcgagcggctcggcaacatccagcct
ccggcgctggagcccgtgctgggcggagagtcccgcgcctatcgccgggtctgccggctg
gccatcaagtttgacaagaacggccgctgcacccgggtgggctttcgtcgccgtcagtcc
aacgatctggtggagatcagtggctgtccggtgctggccgaaccgctctccgcgctgatc
gccccgctgcgcgaatgcctcaaccgcctcaagagccagcgtgagctgggccatgcggag
ttgatccaggccgagcaggggatcctgatgctgctgcgccataccggccgaccgaccgag
gcggatcgggctcagctgatcgagttcgccaaggtgcaggggatcgacctctatctgcag
gcggccgacgagcagatcgagccgctgcaccagcaatttgcgccctcctactcgctggat
ggcctgtctcttgcattcgctcccggtgacttcatccaggtcaacggcccggtcaaccag
cgcatggtggagcaggcgctgaactggctcgaggcgggcaaggatgacaaggtgctcgat
ctcttctgcggcatcggcaacttcaccctgccgctggcccgtcaggcccgcgaagtggtg
ggggtggaaggggcgctggccatggtggcccgtgccgaagagaacgcccgtcgcaacggc
atcgagaatgcacgtttctacaaggcggacctgagcggcgacatcgccggcatgtcctgg
gcgcgggaagggttcgatctggtgctgctggatccggcccgtcccggtgcgttcgaggtg
atggagcacgtcgtgaaactttcacccagacgggtggtctacgtttcctgtaatccggtc
accctggcgcgcgacagccaggtgctggtgaaagggggctatcggctggtgcgcctcggc
atgctcgacatgttcccgcacaccggccacctggagtccatggcgctgttcgagcgcaaa
tag
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integrated database retrieval system
