Aeromonas dhakensis: CK627_09255
Help
Entry
CK627_09255 CDS
T05186
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
adh
Aeromonas dhakensis
Pathway
adh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK627_09255 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adh03019
]
CK627_09255 (pnp)
03016 Transfer RNA biogenesis [BR:
adh03016
]
CK627_09255 (pnp)
Enzymes [BR:
adh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CK627_09255 (pnp)
Messenger RNA biogenesis [BR:
adh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CK627_09255 (pnp)
Transfer RNA biogenesis [BR:
adh03016
]
Prokaryotic type
tRNA degradation factors
CK627_09255 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
OB_RRP5_4th
S1_TP0910
LppA
KH-I_KHDC4-BBP
OB_PDCD11
DUF5813
Motif
Other DBs
NCBI-ProteinID:
ASX10956
UniProt:
K1JE38
LinkDB
All DBs
Position
1882359..1884497
Genome browser
AA seq
712 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVFGHEQMQAVINAINEFAADVGTKPWNWTAPAVNEA
LKAKVAELATAELGEAYRITEKAVRYETIGAIKARVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVATGVLPRAHGSALFTRGETQAMVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSADEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRIAAVD
GDAAKEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADYLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAAPAAVAVEEPAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccggt
gtgatggcccgtcaagccactgcggccgtcatggtcagcatggacgatacctgcgtattt
gtgaccgtcgttggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggtcgcccgagcgaaggcgagaccctgatctcccgtctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccggccgtctctcccgacatcgttgccatgatcggtgcctccgcggcgctggccatctcc
ggtatcccgttcggcggcccgatcggtgcagcccgcgtgggttacatgaacggtcagtac
gtgctgaacccgactaccaccgaactgccccagagcgatctggatctggtggttgccggt
accgccaacgccgtgctgatggtggaatccgaagcggccatcctctccgaagaggtgatg
ctgggtgccgtggtctttggtcacgagcagatgcaggccgttatcaacgccatcaacgaa
ttcgctgccgacgtcggcaccaagccgtggaactggactgcgcctgccgtcaacgaagcg
ctgaaagccaaggttgccgagctggcgactgccgagctgggtgaagcctaccgcatcacc
gagaaggccgtgcgttacgaaaccatcggtgccatcaaggctcgcgtggttgaacaagtc
atcgcttccggcgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggtcgcgtcgttcgtggcgagccgcgtatcgatggtcgcgatccg
gaaatgatccgcgccctgtccgtcgccaccggcgtactgccccgtgcccacggctccgcc
ctgttcacccgcggtgaaacccaggccatggtcgttgcgaccctgggtaccgagcgtgac
gcccagaacatcgacgagctgaccggcaaccgcgccgatcgctttatgctgcactacaac
ttcccgccatactgcgtcggtgagaccggcatgatgggtagcccgaagcgccgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgacgagttc
ccgtacgtggtacgcgtggtctctgaaatcaccgaatccaacggctcctcctccatggcc
tccgtctgtggttcctccctggcgctgatggacgccggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgacgaagatcacctgggcgacatggacttcaaggttgccggtaccaccgaaggt
gtgaccgccctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctgaagcaagctcgtggtgctcgcctgcacatcctgaaagtgatggacgaagccatc
caggctccgcgtgccgagatctccgatttcgccccgcgcatccacaccatcaagatcaac
ccggagaagatcaaggacgtcatcggcaagggtggttccgtgatccgcgccctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtaccgtccgcatcgccgccgttgac
ggtgacgccgccaaggaagcgatccgccgcatcgaggccatcaccgccgagatcgaagtg
aaccgcatctacgaaggcaaggtcgtccgtctggccgacttcggcgccttcgtcaacatc
ctgccgggcaaggacggtctggtacacatctcccagatcaccgatgctcgcgtgcagaac
gtggccgactacctgaagatcggtgacgtggtgaaggtgaaggtactggaagtggaccgt
cagggccgcgtacgtctctccatcaaggaagcgaacgccccgaccgaagctgccgccgct
ccggctgccgttgccgtcgaagagccggctgccgaataa
DBGET
integrated database retrieval system
