Aeromonas dhakensis: CK627_09360
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Entry
CK627_09360 CDS
T05186
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
adh
Aeromonas dhakensis
Pathway
adh03410
Base excision repair
adh03430
Mismatch repair
adh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK627_09360
03430 Mismatch repair
CK627_09360
03440 Homologous recombination
CK627_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_09360
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CK627_09360
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CK627_09360
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CK627_09360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
ASX10975
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Position
1906102..1907832
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AA seq
576 aa
AA seq
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MPLLIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSANQLLPPQRLFGMAQAVP
LLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGRHIDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPDADAIVNPNQHGC
DFPSKSLAGVGVAFYLMAALNTHLRQSGWYERQGLRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSEDINLARQLASEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAVIGELVTPELLTGVLLTDGELLPDELTLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLQRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgctaatccgtcgtcgtccgcgcgtggatgattcccatctgcccgccaccctt
catcccttgctgcggcaaatcttcgccagccgtggggtcgaagaccctgccctgctggag
cgcagcgccaatcagctgctgccaccccagcgcctgttcggcatggcgcaggcagtgccc
ctgctggccgaggcgctgacggcgcaaaagcgcattctcatcgtcggtgacttcgattgt
gacggcgccaccagctcggccctgtgcgtgctggccctgcgcgccatgggggggcgccac
atcgattttctggtgcccaaccgcttcgagttcgggtatggcctcacccccgagatcgtc
gagctggcggtggcccgcggcgccgaattcctcatcacggtggacaacggcatctccagc
atcgccggggtggcggcagccaaggcggccggcatgcaggtactggttaccgatcaccat
ttgccgggccaggagctgcctgatgccgacgcgatagtgaaccccaaccagcatggctgc
gattttccctccaagtctctggccggggtcggggtcgccttctatctgatggcggcgctc
aacacccatctgcgccagagtggctggtatgagcgccaggggctgcgcgcccccaacgtg
gcggattacctggatctggtagcccttggcacggtggccgacgtggtggcgctcgatggc
aacaaccgcatcctggtccatcagggcctgcagcggatccgggccggccgctgccgcccc
ggcatccaggcgctggtggacgtgtcgggccgcgatggtcgtcgcctgtgcgccgccgat
ctcggctttgcgctggggccgcgcctcaacgcggtgggccggctcgacgacatgtccctc
ggggtcgcctgcctgctgagcgaggacatcaacctggcgcgccagctcgcctccgaaatg
gacagcctcaaccaggagcgcaaggaaatagagcaggggatgcagcaggaggcgctggcc
accctggagcagatccggtttcgtgatggcgaggtgccctccggtatcgtgctgcaccgg
gacgagtggcatcagggggtggtggggctggtggcctccaaggtgaaggagaagtactac
cgcccggtcatcgcgtttgccgagagcagcgagaccgagctcaagggctccgggcgctcc
atccccggggtgcacctgcgcgatgcgctggaactgctcgatacccgtcaccccggcctg
atgggcaagtttggcggccacgccatggcggccgggctgaccctgcccaaggcaaatatc
gaggccttcgggcgggcgttcgaggcggtcatcggcgagctggtgacccctgagctcttg
accggggtgctgctcaccgacggcgaactgctgccggacgagctaaccctcgagctggcg
gagctgatccgtgcctccggcccctggggtcaggccttccccgagccgctcttcgatggc
gagttcgtgctggtgcagcagcggctggtgggggagaagcacctcaagatgatgctgacc
acggattccggccacgcggtggatgccatcgccttcggggtcgacttgcagcgctggccc
gatgcctcggtcaaacgggtgcggctggtctaccggctcgacgtcaacgagtggcgtggc
aaccgcagcgtgcaactgctggtggagcatctggaggccgccggcctctga
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