Aeromonas dhakensis: CK627_10240
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Entry
CK627_10240 CDS
T05186
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adh03032
]
CK627_10240
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_10240
Enzymes [BR:
adh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CK627_10240
DNA replication proteins [BR:
adh03032
]
Prokaryotic type
DNA Topoisomerases
CK627_10240
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CK627_10240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASX11133
LinkDB
All DBs
Position
2096447..2099068
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDYVVKSSVGHVRDLPTSGSASNEPKKPVIRGIKLSES
EKAAKERNALFSRMGINPTAGWQANYQILPGKEKVVSELQSLAEKADTIYLATDLDREGE
AIAWHLREIIGGDDSRYKRVVFNEITKTAIQEAFAQPSELNIHRVNAQQARRFLDRVVGY
MVSPLLWKKLARGLSAGRVQSVAVRLIVDKEREIKAFVPVEFWDLNADLLTGDNADLRME
VVSRNGADFKPVTQAETFAAVAALEGVDYKVVNREDKPTGSKPSAPFITSTLQQAASTRL
SFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVEAVREYIGEQYGAAYLPSDPNLYGA
KANAQEAHEAIRPSSVLVTAEMLEGMEPDAMRLYDLIWRQFVACQMTPAQYDSSTLTVKA
GEFELKARGRTLRFAGWTKALPPMGRKGEDSQLPAVTVGEVLKLVKLDPRQHFTKPPARF
TEAALVRELEKRGIGRPSTYASIISTIVDRGYVRVESRRFFAEKMGEIVTDRLVENFVEL
MNYEFTAKMEDKLDGIAEGSLEWKKVLDAFYAEFTQELEKADLPVEEGGMRANQMVLTDI
DCPDCGRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVSADEFVSATDGDEAETEALR
AKHRCGVCGTAMDAYIIDDSRKLHVCGRNPDCDGYEIEKGQFKLKGYEGPSIECDRCGSE
MQLKNGRFGKYMGCTNDTCKNTRKILKNGDIAPPKEDPVPLPELKCTQSDAHFVLRDGAA
GLFLAASNFPKSRETRAPLVEELKRFKERLSPKHQYLADAPASDPDGNASIVRFSRKTKE
QYVMTEVNGKATGWTAHYDNGKWQESLAKSKKA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcactggtcatagtggagtctccggccaaggccaagaccatcaacaaatat
ttgggcaaggactacgtggtgaaatccagcgttggtcacgtgcgcgatctgccgaccagc
ggcagcgccagcaacgagcccaaaaaacctgtcattcgcggcatcaagctgagcgaatca
gaaaaggctgccaaggagcgcaatgccctgttctcacggatggggatcaatccgaccgca
ggctggcaggccaactaccagattttgcccggcaaggaaaaagtggtcagcgagttgcag
agtctggccgagaaggccgacaccatctatctcgcaaccgacttggatagagagggggaa
gcgatcgcctggcacctgcgcgagatcatcggcggcgacgacagccgctacaagcgcgtg
gtgttcaacgagatcaccaagaccgccatccaggaggcgttcgcccagccgtccgagctg
aacattcaccgcgtcaatgcccagcaggcccgtcgtttcctcgaccgggtggtgggttac
atggtctccccgctcttgtggaagaagctggcccgcggcctctccgccggccgggtacag
tccgtcgcggtgcgcctcatcgtcgacaaagagcgtgaaatcaaggcgttcgtgccggtg
gagttctgggatctcaacgccgacctgctgaccggtgataacgccgatctgcggatggag
gtggtcagccgcaacggcgccgacttcaagccggtgacccaggccgagaccttcgccgcc
gtggccgccctggaaggggtcgactacaaggtggtgaaccgggaagacaagccgaccggc
tccaaaccgtccgctcccttcatcacctccaccctgcagcaggcggcctccacccggctg
agcttcggggtcaagaagaccatgatgatggcccagcgcctctatgaagcgggttacatc
acctatatgcgtaccgactccaccaacctcagcaaagaggcggtcgaggcggtgcgggaa
tacatcggcgagcagtatggcgccgcctatctgccgagcgatccgaacctgtacggtgcc
aaggccaatgcccaggaggcccacgaggcgatccgcccctccagcgtgctggtgacggcc
gagatgctggaagggatggagccggacgccatgcggctctatgacctcatctggcgtcag
tttgtcgcctgtcagatgaccccggcccagtacgactcctccaccctgaccgtcaaggcg
ggtgagttcgagctcaaggcgcgcggccgcaccctgcgcttcgccggttggaccaaggcg
ctgccgccgatgggccgcaagggtgaagacagccagctgccggcggtgaccgtcggcgaa
gtgctcaaactggtcaaactggatccgcgccagcacttcaccaagccgcccgcccgtttc
accgaagcggcgctggtgcgcgagctggaaaagcgcggcatcggccgcccgtccacctac
gcctccatcatctccaccatcgtcgaccgtggttatgtgcgggtcgagagccgccgtttc
ttcgccgagaagatgggtgagatcgtcaccgaccggctggtggagaacttcgtcgagctg
atgaactacgagttcaccgccaagatggaagacaagctcgacggcatcgccgaggggagc
ctggagtggaagaaggtgctggacgccttctacgccgagttcacccaggagctggaaaaa
gcggatctgccggtggaagaggggggcatgcgtgccaaccagatggtgctgaccgacatc
gactgcccggattgcggccgcaagatgggcatccgcaccgccaccaccggggtcttcctc
ggctgctccggttacgccttgccgcccaaagagcgctgcaagaagaccatcaacctggtc
tccgccgacgagttcgtctccgccaccgacggtgacgaggccgaaaccgaggcgctgcgc
gccaagcaccgctgcggcgtgtgcggtaccgccatggatgcctacatcatcgacgacagc
cgcaagctgcacgtctgcggtcgcaacccggattgcgacggctacgagatcgagaaaggc
cagttcaagctcaagggctacgaagggccgagcatcgagtgtgaccgctgtggcagcgag
atgcagctcaagaacggccgcttcggcaagtacatgggttgcaccaacgacacctgcaag
aacacccgcaagatcctgaaaaatggtgatatcgcgccgccgaaggaagatccggtaccg
ctgccggagctgaaatgcacccagtccgacgcccacttcgtgctgcgtgacggggccgcc
ggtctgttcctggctgccagcaacttccccaaatcccgcgagactcgtgcgccgctggtg
gaagagctcaagcgcttcaaggagcgcctgtcgcccaagcaccagtacctggccgatgcc
ccggcgtcagatcctgacggtaacgcctccatcgtgcgcttcagtcgcaagaccaaggag
cagtacgtgatgaccgaggtcaacggcaaggcgaccggctggacggcgcactacgacaac
ggcaagtggcaggagagcctggccaagtcgaagaaggcgtga
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