Aeromonas dhakensis: CK627_10560
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Entry
CK627_10560 CDS
T05186
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adh03400
]
CK627_10560
DNA repair and recombination proteins [BR:
adh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK627_10560
Archaeal homologous recombinant proteins
CK627_10560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
MMR_HSR1
Hormone_1
MeaB
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASX11193
LinkDB
All DBs
Position
2172531..2176286
Genome browser
AA seq
1251 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGSAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRVWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISIQTHERAREEQQQLAAIRQRLGDVALMDEATREQWV
SQQISLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACEEGEAALAAAEVAHGAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKLLAELGPELGKLEEQTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGTQEREVQLTLEQGWHQQRQQVEQ
LKAQHQQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDAGRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWQREQERLQQQQHELQEQQWEGRLAKVQEQWQQQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELAPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERARGLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTLRWQQLGGDTLLGHPLPLRQSPIEWNELMSIL
LGRGQSLEQGLARSQQQLREAQQGQQQLQSVRQQLSQLASQHQQFEQQWQEADRQRIALE
GEVKAMGEQEATLRQRLAQGGSRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLAGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLGGEEIALV
EHRWQQRLQQLASELEAMQGAARALRERQTELKARLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPEELDSRLTALEAHCRALDEQLFQCKSTLAQAEAAALKAGTLQEELAAQ
QAVADHWRRLSDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLPG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcgctgtcaggggagaacctcgccagcctgactggtcaattcaccatc
gattttgccggtggcgccctggggtccgccggcctgtttgccatcaccggcaatactggc
gccggcaagagcaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
ttcattgccaatcgcaagaacgtggccgaagtgggtcgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgtggccacgccagcggttttgccgaggtg
cagtttcgcggctgcgacggccgtgtctggctggcccgctgggctgtgcgccgggcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcctgggagcagtttcgccgcgccgtcatcctgccgcagggggagtttgccgccttcctc
aaatcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgccatttcgatccagacccatgagcgggcgcgggaggagcagcagcaactggccgcc
atccgccagcggctcggcgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcagataagcctcgccaccagcctcaaacacgagcagcaacaacagcaactgatg
caggacttgcgcgacctcaacggccgcatcgccgcccagttgcaggcctgtgaggagggg
gaggcggcccttgccgccgcagaggtggcccacggtgcggccgcccccgagcgcgaggag
tttgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggctcgcctc
accctggaggtgcagcagcaggagaaactgctggccgagctcggccccgaacttggcaag
ctggaggagcagacccagcagagcgccctcaccgagcagcagctgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcccgagctcaagcgggcgcaggagctcgac
acccgcattcgggaaaagcagcagcaactgcagaagatccagcaggagggaacgcaggag
cgggaggtgcagctcaccctggagcagggctggcaccagcagcgccagcaggtggagcag
ctcaaggcccagcaccagcagtggggcgcttggcttgaagagcacaaggagctggcgccg
gtggcccgccaatggcagcccctgctcaccgccatgcaggattgggccgaagatgccggc
aggctgcagcagctccttaccctgcgtgagcacaagctgcgcgccctcaggcagttgcag
caccagctggagcaagggcagcaggagcgcgactactggcagcgcgagcaggagcggctg
cagcagcaacagcacgagctgcaggagcagcagtgggagggacgcctggccaaggtgcag
gagcagtggcagcagcagaccgaacagctgggccagctgcgccagctgctggagctggcc
gactatggccgcaatcacggcgagcagcatggtcgcctgcagcaggagatagcccagctg
gagcaggcgctcggcaagctggccattctcggcgacgagctggcgccggcccgtgagcgg
ctcgccctgcagcgggacgaggcgcgccacgcgctggagcagtcccgcgccatcgccagt
ttcgagcagcatcgccacatcttgcgcgacggtgaaccttgcccgctgtgcggtgccgag
gagcacccctatcaccagagccaaccacaggtggcgggcattctgggccagctggcggag
cgcgcccgcggcctcgagctcgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgtcagctggcggtgcgccagcaacatctgccggagctg
gagacccgtgccgagcagctgaccttgcgttggcagcagctgggaggcgataccctgctc
ggccatccgttgccgctgcgtcagagcccaattgagtggaacgagctgatgagcatcctg
ctgggccgtggccagagcctggagcaggggctggcccgcagccagcagcagctacgtgag
gctcagcaggggcagcagcagttgcagtccgtgcgccagcagttgagccagctggccagc
cagcaccagcagttcgagcagcagtggcaggaggccgaccgccagcgcatcgctctggag
ggggaggtgaaggccatgggcgagcaggaggcgaccctgcgccagcgcctcgcgcagggg
ggcagccggctcgacgaacagatggggggccagccctggcgccagtggctgggcagccag
cagtggcacgagtggcagcgggcctgcgaggcttggctgcacggccagagcgagtgggag
cggctggccggcgagattgccagcctcaccccggccctgagcgcccaggaggcgcgcctg
cagacccagcgtgagctgctgcacaagctcgagcgcgactacaaggagcatgaacagcaa
cggcaggggctggtcaccagccgcgccacttgcctggggggcgaggagattgccctggtc
gagcatcgctggcagcagcggctgcagcagctggccagcgagctggaggcgatgcagggg
gcggcccgcgccctgcgtgagcgccagaccgagctcaaggcccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcggcgggaggtgctggggcgctgggctgcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagtccggat
gagctcaaggcgcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcgctggaggagagcaagcgggatcgttat
cgcgagcatcaccccgagctggctgcactggcgccagaggagctcgacagccggctgacg
gcgctggaggcacactgccgcgccctcgacgagcagctgttccagtgcaagagcacgctg
gcccaggccgaggcggctgccctcaaggcgggcaccctgcaggaggagctggccgcccag
caggcggtggcggatcactggcggcgactctccgatcttatcggctcggccagcggtgcc
aagttgcgaaccttcgcccagagcctcaccctggagcggttgctgctggaggccaacgcc
cagcttgccgagctctcccctcgctatcgactggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggacgaggtgcgctcggtagactccctctccggc
ggcgagagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcgcgc
cagacccaggtcgaatcgctttttatcgacgagggcttcggcacgctcgatcccgacagc
ctggatctggcgctctcaagcctggactccctgcaggcggccggccgccagatcggggtc
atctcccacgtgcagaccctggtggagcggatcggtgtgcaggtgagggtggaggccctc
ggcggcggcgaaagccgggtggtgctgcctggatga
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