Aeromonas dhakensis: CK627_13595
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Entry
CK627_13595 CDS
T05186
Name
(GenBank) diguanylate phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
adh
Aeromonas dhakensis
Brite
KEGG Orthology (KO) [BR:
adh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adh03019
]
CK627_13595
Messenger RNA biogenesis [BR:
adh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CK627_13595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ASX11742
LinkDB
All DBs
Position
complement(2875470..2877110)
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AA seq
546 aa
AA seq
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MLNKLGSNQLMVMALICAPLLLLQGLWLAFASTPLTLLLILATSLLGFGLLIRLVMRLQQ
ADRERQEQVWCRALQLRDPTCLETPTAQAALQQLLAHFNEAELDAHRQISELHNQATQDE
LTQLQNRHAFRRDMTELLQRDQDTQTATLVLVRATELGKLNAQRGFQSGDAYIKDIANLI
NKVVSRFPGHQVYRISGADFAVLVRPEANIPPPLLGRDLKIAFDHYQQQHELESAAYSGL
TRLSSGQKIEAILARADLALARAQTETVNGWAIQQDDNVVELQGQHHWKLVLTELLEQER
IDFTYQPIQPMHRSMLAYNEIYTRFSSADGTVLPTDTLFAMAQRLDMVMRLEQMLVIHVM
RQYRAFGSNQSRWGINLSSNLLQNSAFLIWLDRQLLNDPNTSANLVFELDEEHLERNLTG
AKRVFELLRRNGSRSAICNFGKGIGSFNLFRELKPDYIKLDPALITGLEQDLTNQQFVRM
IVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIARPQPLRPDISQLGLFTEDAS
TSTESE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagctcgggagcaaccagttgatggtgatggctctcatctgtgctcccctg
ctgttgctgcaggggctctggctcgccttcgcgagcacgccgctcaccctgctgctcatc
ctcgccaccagcctgctcggctttggcctgctgatccggctggtgatgaggctgcaacag
gcggatcgggagaggcaggagcaggtgtggtgccgggcgctgcaactgcgcgaccccacc
tgcctggagaccccgacagcccaggccgccctgcagcaactgctcgcccacttcaacgaa
gccgagctcgatgcccaccgccagatcagcgaactgcacaatcaggcgacccaggacgag
ctgacccagctgcaaaaccgccacgcctttcgccgcgacatgaccgagctgctgcagcgg
gatcaggatacccagaccgccaccctggtgctggtccgcgccaccgagcttggcaagctc
aacgcccagcgcggctttcagtcgggggatgcctacatcaaggatattgccaatctcatc
aacaaggtggtgagccgctttcccggccatcaggtctaccgtatctcgggagcagacttc
gcggtactggtacggccggaggccaacataccgcctcccctgctcgggcgggatctgaag
atcgccttcgatcactaccagcagcagcacgagctggagagcgccgcctactccgggctg
acccggctcagcagcggccagaagatagaggccattctggcccgggcggatctggcgctg
gcccgcgcccagaccgagacggtcaacggctgggccatccagcaggatgacaacgtggtg
gagctgcaggggcagcatcactggaaactggtgctgaccgagctgctggagcaggagcgg
atcgactttacctatcagccaatccagcccatgcaccgcagcatgctggcctacaacgag
atctacacccgtttcagcagcgccgacggtaccgtgctgcccaccgacaccctgtttgcc
atggcccagcggctggacatggtgatgcggctggaacagatgctggtgatccacgtcatg
cgccagtaccgggcctttggctcgaatcagagtcgctggggcatcaacctctccagcaat
ctgctgcaaaacagcgcctttctgatctggctggaccgacagctgctcaacgaccccaac
accagcgccaacctggtgttcgagctggatgaggagcatctggagcgcaacctgaccggg
gccaagcgggtgttcgagctgctcagacgcaacggcagccgctccgccatctgcaacttc
ggcaaggggatcggctcgttcaatctgtttcgcgagctcaagcccgactacatcaagctg
gatcccgccctcatcaccgggctggagcaggatctgaccaatcagcagttcgtgcggatg
atcgtcgacgtgtcacaccggatgggttgccaggtgattgcggaaggggtcgagcagctg
ggccagaagcagctgctgcagggcatgtatgtggacgggttgcagggctatctcatcgcc
aggccccagccgcttcggccggacatcagccagctcgggctctttactgaggatgcttca
acttcaacagagtcagaatga
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